RNA–Protein interactions for RNA: ENST00000491581.5

HDAC3-211, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 777 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-211ENST00000491581 FAM187BQ17R55 369 aa9.81□□□□□ -0.84
HDAC3-211ENST00000491581 ZBTB41Q5SVQ8 909 aa9.81□□□□□ -0.84
HDAC3-211ENST00000491581 ATF7IP2Q5U623 682 aa9.81□□□□□ -0.84
HDAC3-211ENST00000491581 RINT1Q6NUQ1 792 aa9.81□□□□□ -0.84
HDAC3-211ENST00000491581 FAM173BQ6P4H8 233 aa9.81□□□□□ -0.84
HDAC3-211ENST00000491581 LILRA6Q6PI73 481 aa9.81□□□□□ -0.84
HDAC3-211ENST00000491581 CCDC149Q6ZUS6 474 aa9.81□□□□□ -0.84
HDAC3-211ENST00000491581 C1orf186Q6ZWK4 172 aa9.81□□□□□ -0.84
HDAC3-211ENST00000491581 GRASPQ7Z6J2 395 aaPredicted RBP9.81□□□□□ -0.84
HDAC3-211ENST00000491581 SUGP1Q8IWZ8 645 aaKnown RBP9.81□□□□□ -0.84
HDAC3-211ENST00000491581 FLCNQ8NFG4 579 aa9.81□□□□□ -0.84
HDAC3-211ENST00000491581 ERMNQ8TAM6 284 aa9.81□□□□□ -0.84
HDAC3-211ENST00000491581 LNX1Q8TBB1 728 aaPredicted RBP9.81□□□□□ -0.84
HDAC3-211ENST00000491581 SMG7Q92540 1137 aaKnown RBP9.81□□□□□ -0.84
HDAC3-211ENST00000491581 CCDC51Q96ER9 411 aa9.81□□□□□ -0.84
HDAC3-211ENST00000491581 KCNK12Q9HB15 430 aa9.81□□□□□ -0.84
HDAC3-211ENST00000491581 UBN1Q9NPG3 1134 aa9.81□□□□□ -0.84
HDAC3-211ENST00000491581 SH2B1Q9NRF2 756 aaPredicted RBP9.81□□□□□ -0.84
HDAC3-211ENST00000491581 NOL7Q9UMY1 257 aaKnown RBP9.81□□□□□ -0.84
HDAC3-211ENST00000491581 LRRN2O75325 713 aa9.8□□□□□ -0.84
HDAC3-211ENST00000491581 THP07101 528 aa9.8□□□□□ -0.84
HDAC3-211ENST00000491581 ADH1AP07327 375 aa9.8□□□□□ -0.84
HDAC3-211ENST00000491581 GUCY2FP51841 1108 aa9.8□□□□□ -0.84
HDAC3-211ENST00000491581 NCBP1Q09161 790 aaKnown RBP9.8□□□□□ -0.84
HDAC3-211ENST00000491581 MTMR3Q13615 1198 aa9.8□□□□□ -0.84
HDAC3-211ENST00000491581 GIT2Q14161 759 aa9.8□□□□□ -0.84
HDAC3-211ENST00000491581 PSMD5Q16401 504 aa9.8□□□□□ -0.84
HDAC3-211ENST00000491581 USP41Q3LFD5 358 aa9.8□□□□□ -0.84
HDAC3-211ENST00000491581 ARSHQ5FYA8 562 aa9.8□□□□□ -0.84
HDAC3-211ENST00000491581 SPECC1Q5M775 1068 aa9.8□□□□□ -0.84
HDAC3-211ENST00000491581 USP49Q70CQ1 688 aa9.8□□□□□ -0.84
HDAC3-211ENST00000491581 ZDHHC14Q8IZN3 488 aa9.8□□□□□ -0.84
HDAC3-211ENST00000491581 ITFG1Q8TB96 612 aa9.8□□□□□ -0.84
HDAC3-211ENST00000491581 ING5Q8WYH8 240 aa9.8□□□□□ -0.84
HDAC3-211ENST00000491581 NECTIN4Q96NY8 510 aa9.8□□□□□ -0.84
HDAC3-211ENST00000491581 PPP1R10Q96QC0 940 aaKnown RBP9.8□□□□□ -0.84
HDAC3-211ENST00000491581 ACO2Q99798 780 aaKnown RBP9.8□□□□□ -0.84
HDAC3-211ENST00000491581 NT5C3AQ9H0P0 336 aa9.8□□□□□ -0.84
HDAC3-211ENST00000491581 PTPRHQ9HD43 1115 aa9.8□□□□□ -0.84
HDAC3-211ENST00000491581 CA14Q9ULX7 337 aa9.8□□□□□ -0.84
HDAC3-211ENST00000491581 FARP1Q9Y4F1 1045 aaPredicted RBP9.8□□□□□ -0.84
HDAC3-211ENST00000491581 CLUHO75153 1309 aa9.8□□□□□ -0.84
HDAC3-211ENST00000491581 TSC2P49815 1807 aa9.79□□□□□ -0.84
HDAC3-211ENST00000491581 MYO15AQ9UKN7 3530 aa9.79□□□□□ -0.84
HDAC3-211ENST00000491581 SMIM28A0A1B0GU29 152 aa9.79□□□□□ -0.84
HDAC3-211ENST00000491581 FSD2A1L4K1 749 aa9.79□□□□□ -0.84
HDAC3-211ENST00000491581 KRBA1A5PL33 1030 aa9.79□□□□□ -0.84
HDAC3-211ENST00000491581 TISP43B9A030 160 aa9.79□□□□□ -0.84
HDAC3-211ENST00000491581 K7ERI5 159 aa9.79□□□□□ -0.84
HDAC3-211ENST00000491581 OR1D2P34982 312 aa9.79□□□□□ -0.84
HDAC3-211ENST00000491581 TNFSF9P41273 254 aa9.79□□□□□ -0.84
HDAC3-211ENST00000491581 ATP2C1P98194 919 aaPredicted RBP9.79□□□□□ -0.84
HDAC3-211ENST00000491581 BMS1Q14692 1282 aaKnown RBP9.79□□□□□ -0.84
HDAC3-211ENST00000491581 RABEP1Q15276 862 aa9.79□□□□□ -0.84
HDAC3-211ENST00000491581 ZNF568Q3ZCX4 644 aa9.79□□□□□ -0.84
HDAC3-211ENST00000491581 HAUS3Q68CZ6 603 aa9.79□□□□□ -0.84
HDAC3-211ENST00000491581 SCARA3Q6AZY7 606 aa9.79□□□□□ -0.84
HDAC3-211ENST00000491581 DTHD1Q6ZMT9 781 aa9.79□□□□□ -0.84
HDAC3-211ENST00000491581 PPFIBP1Q86W92 1011 aa9.79□□□□□ -0.84
HDAC3-211ENST00000491581 DDX27Q96GQ7 796 aaKnown RBP9.79□□□□□ -0.84
HDAC3-211ENST00000491581 FAM84AQ96KN4 292 aa9.79□□□□□ -0.84
HDAC3-211ENST00000491581 PRIMPOLQ96LW4 560 aa9.79□□□□□ -0.84
HDAC3-211ENST00000491581 DCBLD2Q96PD2 775 aa9.79□□□□□ -0.84
HDAC3-211ENST00000491581 C2orf40Q9H1Z8 148 aa9.79□□□□□ -0.84
HDAC3-211ENST00000491581 PIDD1Q9HB75 910 aa9.79□□□□□ -0.84
HDAC3-211ENST00000491581 WDR6Q9NNW5 1121 aaKnown RBP9.79□□□□□ -0.84
HDAC3-211ENST00000491581 KMT5AQ9NQR1 393 aa9.79□□□□□ -0.84
HDAC3-211ENST00000491581 ARHGAP28Q9P2N2 729 aa9.79□□□□□ -0.84
HDAC3-211ENST00000491581 ANKFY1Q9P2R3 1169 aa9.79□□□□□ -0.84
HDAC3-211ENST00000491581 TUBGCP4Q9UGJ1 667 aa9.79□□□□□ -0.84
HDAC3-211ENST00000491581 POLIQ9UNA4 740 aa9.79□□□□□ -0.84
HDAC3-211ENST00000491581 ARIH1Q9Y4X5 557 aaPredicted RBP9.79□□□□□ -0.84
HDAC3-211ENST00000491581 MUC6Q6W4X9 2439 aa9.79□□□□□ -0.84
HDAC3-211ENST00000491581 USP34Q70CQ2 3546 aa9.79□□□□□ -0.84
HDAC3-211ENST00000491581 PPEF2O14830 753 aa9.78□□□□□ -0.84
HDAC3-211ENST00000491581 B3GAT3O94766 335 aa9.78□□□□□ -0.84
HDAC3-211ENST00000491581 CENPBP07199 599 aaPredicted RBP9.78□□□□□ -0.84
HDAC3-211ENST00000491581 C8AP07357 584 aa9.78□□□□□ -0.84
HDAC3-211ENST00000491581 TRAPPC10P48553 1259 aa9.78□□□□□ -0.84
HDAC3-211ENST00000491581 SLC12A3P55017 1021 aa9.78□□□□□ -0.84
HDAC3-211ENST00000491581 ARPP19P56211 112 aa9.78□□□□□ -0.84
HDAC3-211ENST00000491581 PDIA5Q14554 519 aa9.78□□□□□ -0.84
HDAC3-211ENST00000491581 PCBP1Q15365 356 aaKnown RBP eCLIP9.78□□□□□ -0.84
HDAC3-211ENST00000491581 UPP1Q16831 310 aa9.78□□□□□ -0.84
HDAC3-211ENST00000491581 KRT79Q5XKE5 535 aa9.78□□□□□ -0.84
HDAC3-211ENST00000491581 PARM1Q6UWI2 310 aa9.78□□□□□ -0.84
HDAC3-211ENST00000491581 HACE1Q8IYU2 909 aa9.78□□□□□ -0.84
HDAC3-211ENST00000491581 SIX5Q8N196 739 aa9.78□□□□□ -0.84
HDAC3-211ENST00000491581 SLC7A14Q8TBB6 771 aa9.78□□□□□ -0.84
HDAC3-211ENST00000491581 FGF14Q92915 247 aa9.78□□□□□ -0.84
HDAC3-211ENST00000491581 IFT74Q96LB3 600 aa9.78□□□□□ -0.84
HDAC3-211ENST00000491581 TTPALQ9BTX7 342 aa9.78□□□□□ -0.84
HDAC3-211ENST00000491581 FBXW11Q9UKB1 542 aa9.78□□□□□ -0.84
HDAC3-211ENST00000491581 DNM3Q9UQ16 869 aa9.78□□□□□ -0.84
HDAC3-211ENST00000491581 TNFSF13BQ9Y275 285 aa9.78□□□□□ -0.84
HDAC3-211ENST00000491581 CDY1Q9Y6F8 540 aa9.78□□□□□ -0.84
HDAC3-211ENST00000491581 SF3B1O75533 1304 aaKnown RBP eCLIP9.78□□□□□ -0.849e-6■■■■■ 68.9
HDAC3-211ENST00000491581 PHLPP2Q6ZVD8 1323 aa9.78□□□□□ -0.84
HDAC3-211ENST00000491581 NR1I2O75469 434 aa9.77□□□□□ -0.85
HDAC3-211ENST00000491581 ZMYND10O75800 440 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms