RNA–Protein interactions for RNA: ENST00000491433.1

CLCNKA-206, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 3

Gene CLCNKA, Length 824 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-206ENST00000491433 RNF149Q8NC42 400 aa12.4□□□□□ -0.42
CLCNKA-206ENST00000491433 PIK3R5Q8WYR1 880 aa12.4□□□□□ -0.42
CLCNKA-206ENST00000491433 DNASE1L2Q92874 299 aa12.4□□□□□ -0.42
CLCNKA-206ENST00000491433 TTPALQ9BTX7 342 aa12.4□□□□□ -0.42
CLCNKA-206ENST00000491433 GPR62Q9BZJ7 368 aa12.4□□□□□ -0.42
CLCNKA-206ENST00000491433 MINDY3Q9H8M7 445 aa12.4□□□□□ -0.42
CLCNKA-206ENST00000491433 GDE1Q9NZC3 331 aa12.4□□□□□ -0.42
CLCNKA-206ENST00000491433 DAXXQ9UER7 740 aaPredicted RBP12.4□□□□□ -0.42
CLCNKA-206ENST00000491433 POLIQ9UNA4 740 aa12.4□□□□□ -0.42
CLCNKA-206ENST00000491433 MTF2Q9Y483 593 aaPredicted RBP12.4□□□□□ -0.42
CLCNKA-206ENST00000491433 NID2Q14112 1375 aa12.4□□□□□ -0.42
CLCNKA-206ENST00000491433 ZNF462Q96JM2 2506 aa12.39□□□□□ -0.43
CLCNKA-206ENST00000491433 DOCK6Q96HP0 2047 aa12.39□□□□□ -0.43
CLCNKA-206ENST00000491433 TARSP26639 723 aaKnown RBP12.39□□□□□ -0.43
CLCNKA-206ENST00000491433 CCR3P51677 355 aa12.39□□□□□ -0.43
CLCNKA-206ENST00000491433 NLRP5P59047 1200 aa12.39□□□□□ -0.43
CLCNKA-206ENST00000491433 PTENP60484 403 aa12.39□□□□□ -0.43
CLCNKA-206ENST00000491433 HSP90AA2PQ14568 343 aaPredicted RBP12.39□□□□□ -0.43
CLCNKA-206ENST00000491433 PSMD5Q16401 504 aa12.39□□□□□ -0.43
CLCNKA-206ENST00000491433 AASDHQ4L235 1098 aaPredicted RBP12.39□□□□□ -0.43
CLCNKA-206ENST00000491433 PLA2G4FQ68DD2 849 aa12.39□□□□□ -0.43
CLCNKA-206ENST00000491433 FERMT3Q86UX7 667 aa12.39□□□□□ -0.43
CLCNKA-206ENST00000491433 FAM177A1Q8N128 213 aaPredicted RBP12.39□□□□□ -0.43
CLCNKA-206ENST00000491433 TMEM143Q96AN5 459 aa12.39□□□□□ -0.43
CLCNKA-206ENST00000491433 TCEANC2Q96MN5 208 aa12.39□□□□□ -0.43
CLCNKA-206ENST00000491433 MTRQ99707 1265 aa12.39□□□□□ -0.43
CLCNKA-206ENST00000491433 EIF2AQ9BY44 585 aaKnown RBP12.39□□□□□ -0.43
CLCNKA-206ENST00000491433 SLKQ9H2G2 1235 aaPredicted RBP12.39□□□□□ -0.43
CLCNKA-206ENST00000491433 MIOSQ9NXC5 875 aa12.39□□□□□ -0.43
CLCNKA-206ENST00000491433 RALGAPA1Q6GYQ0 2036 aa12.38□□□□□ -0.43
CLCNKA-206ENST00000491433 INO80B-WBP1J3KQ70 363 aa12.38□□□□□ -0.43
CLCNKA-206ENST00000491433 ADAMTS3O15072 1205 aa12.38□□□□□ -0.43
CLCNKA-206ENST00000491433 CCL16O15467 120 aa12.38□□□□□ -0.43
CLCNKA-206ENST00000491433 TSPAN1O60635 241 aa12.38□□□□□ -0.43
CLCNKA-206ENST00000491433 RPL17P18621 184 aaKnown RBP12.38□□□□□ -0.43
CLCNKA-206ENST00000491433 SPINK2P20155 84 aa12.38□□□□□ -0.43
CLCNKA-206ENST00000491433 CD72P21854 359 aa12.38□□□□□ -0.43
CLCNKA-206ENST00000491433 CNR2P34972 360 aa12.38□□□□□ -0.43
CLCNKA-206ENST00000491433 NPEPPSP55786 919 aa12.38□□□□□ -0.43
CLCNKA-206ENST00000491433 PPP2R5CQ13362 524 aa12.38□□□□□ -0.43
CLCNKA-206ENST00000491433 TUSC3Q13454 348 aa12.38□□□□□ -0.43
CLCNKA-206ENST00000491433 EMC2Q15006 297 aa12.38□□□□□ -0.43
CLCNKA-206ENST00000491433 PABPC1LQ4VXU2 614 aaKnown RBP12.38□□□□□ -0.43
CLCNKA-206ENST00000491433 LARP1BQ659C4 914 aaKnown RBP12.38□□□□□ -0.43
CLCNKA-206ENST00000491433 PSAPL1Q6NUJ1 521 aa12.38□□□□□ -0.43
CLCNKA-206ENST00000491433 C19orf48Q6RUI8 117 aa12.38□□□□□ -0.43
CLCNKA-206ENST00000491433 SKAP1Q86WV1 359 aa12.38□□□□□ -0.43
CLCNKA-206ENST00000491433 IFNLR1Q8IU57 520 aaPredicted RBP12.38□□□□□ -0.43
CLCNKA-206ENST00000491433 C4orf19Q8IY42 314 aa12.38□□□□□ -0.43
CLCNKA-206ENST00000491433 ETNPPLQ8TBG4 499 aa12.38□□□□□ -0.43
CLCNKA-206ENST00000491433 B3GALT6Q96L58 329 aa12.38□□□□□ -0.43
CLCNKA-206ENST00000491433 FAM20AQ96MK3 541 aa12.38□□□□□ -0.43
CLCNKA-206ENST00000491433 ZFP42Q96MM3 310 aa12.38□□□□□ -0.43
CLCNKA-206ENST00000491433 KXD1Q9BQD3 176 aa12.38□□□□□ -0.43
CLCNKA-206ENST00000491433 APOL6Q9BWW8 343 aa12.38□□□□□ -0.43
CLCNKA-206ENST00000491433 RNF39Q9H2S5 420 aa12.38□□□□□ -0.43
CLCNKA-206ENST00000491433 SPTA1P02549 2419 aa12.38□□□□□ -0.43
CLCNKA-206ENST00000491433 F8W810 466 aa12.37□□□□□ -0.43
CLCNKA-206ENST00000491433 EDIL3O43854 480 aa12.37□□□□□ -0.43
CLCNKA-206ENST00000491433 IFNAR1P17181 557 aa12.37□□□□□ -0.43
CLCNKA-206ENST00000491433 YWHABP31946 246 aaKnown RBP12.37□□□□□ -0.43
CLCNKA-206ENST00000491433 NTHL1P78549 312 aa12.37□□□□□ -0.43
CLCNKA-206ENST00000491433 RTP2Q5QGT7 225 aa12.37□□□□□ -0.43
CLCNKA-206ENST00000491433 AXDND1Q5T1B0 1012 aaPredicted RBP12.37□□□□□ -0.43
CLCNKA-206ENST00000491433 FAM171A1Q5VUB5 890 aa12.37□□□□□ -0.43
CLCNKA-206ENST00000491433 GALNT17Q6IS24 598 aa12.37□□□□□ -0.43
CLCNKA-206ENST00000491433 SLC27A1Q6PCB7 646 aa12.37□□□□□ -0.43
CLCNKA-206ENST00000491433 TSSK4Q6SA08 328 aa12.37□□□□□ -0.43
CLCNKA-206ENST00000491433 PRSS55Q6UWB4 352 aaPredicted RBP12.37□□□□□ -0.43
CLCNKA-206ENST00000491433 CEP57Q86XR8 500 aa12.37□□□□□ -0.43
CLCNKA-206ENST00000491433 NPAS3Q8IXF0 933 aa12.37□□□□□ -0.43
CLCNKA-206ENST00000491433 TRIM22Q8IYM9 498 aa12.37□□□□□ -0.43
CLCNKA-206ENST00000491433 ST13P5Q8NFI4 369 aaPredicted RBP12.37□□□□□ -0.43
CLCNKA-206ENST00000491433 ITFG1Q8TB96 612 aa12.37□□□□□ -0.43
CLCNKA-206ENST00000491433 GJA10Q969M2 543 aa12.37□□□□□ -0.43
CLCNKA-206ENST00000491433 ELSPBP1Q96BH3 223 aa12.37□□□□□ -0.43
CLCNKA-206ENST00000491433 CPB2Q96IY4 423 aa12.37□□□□□ -0.43
CLCNKA-206ENST00000491433 BBC3Q96PG8 261 aaPredicted RBP12.37□□□□□ -0.43
CLCNKA-206ENST00000491433 CLSTN3Q9BQT9 956 aa12.37□□□□□ -0.43
CLCNKA-206ENST00000491433 SLC26A6Q9BXS9 759 aa12.37□□□□□ -0.43
CLCNKA-206ENST00000491433 NFKBIZQ9BYH8 718 aa12.37□□□□□ -0.43
CLCNKA-206ENST00000491433 CHRDQ9H2X0 955 aa12.37□□□□□ -0.43
CLCNKA-206ENST00000491433 AVENQ9NQS1 362 aaPredicted RBP12.37□□□□□ -0.43
CLCNKA-206ENST00000491433 VPS54Q9P1Q0 977 aa12.37□□□□□ -0.43
CLCNKA-206ENST00000491433 PARP2Q9UGN5 583 aa12.37□□□□□ -0.43
CLCNKA-206ENST00000491433 DDX25Q9UHL0 483 aaKnown RBP12.37□□□□□ -0.43
CLCNKA-206ENST00000491433 PCDHA4Q9UN74 947 aa12.37□□□□□ -0.43
CLCNKA-206ENST00000491433 WASF3Q9UPY6 502 aa12.37□□□□□ -0.43
CLCNKA-206ENST00000491433 MRPS23Q9Y3D9 190 aaKnown RBP12.37□□□□□ -0.43
CLCNKA-206ENST00000491433 GPSM3Q9Y4H4 160 aa12.37□□□□□ -0.43
CLCNKA-206ENST00000491433 HES2Q9Y543 173 aa12.37□□□□□ -0.43
CLCNKA-206ENST00000491433 WDFY3Q8IZQ1 3526 aa12.37□□□□□ -0.43
CLCNKA-206ENST00000491433 ARID2Q68CP9 1835 aa12.37□□□□□ -0.43
CLCNKA-206ENST00000491433 TDP2O95551 362 aa12.36□□□□□ -0.43
CLCNKA-206ENST00000491433 MTAPQ13126 283 aa12.36□□□□□ -0.43
CLCNKA-206ENST00000491433 RAB33AQ14088 237 aa12.36□□□□□ -0.43
CLCNKA-206ENST00000491433 EPHA7Q15375 998 aa12.36□□□□□ -0.43
CLCNKA-206ENST00000491433 XKR9Q5GH70 373 aa12.36□□□□□ -0.43
CLCNKA-206ENST00000491433 C1orf228Q6PIY5 440 aa12.36□□□□□ -0.43
CLCNKA-206ENST00000491433 LNX1Q8TBB1 728 aaPredicted RBP12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms