RNA–Protein interactions for RNA: ENST00000491382.1

PFDN6-207, Transcript of prefoldin subunit 6, humanhuman

TSL 2

Gene PFDN6, Length 989 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN6-207ENST00000491382 CD207Q9UJ71 328 aa17.52■□□□□ 0.4
PFDN6-207ENST00000491382 ADAM28Q9UKQ2 775 aa17.52■□□□□ 0.4
PFDN6-207ENST00000491382 PDCD11Q14690 1871 aaKnown RBP17.52■□□□□ 0.39
PFDN6-207ENST00000491382 SF3B1O75533 1304 aaKnown RBP eCLIP17.51■□□□□ 0.39
PFDN6-207ENST00000491382 CASTOR2A6NHX0 329 aa17.51■□□□□ 0.39
PFDN6-207ENST00000491382 TADA2AO75478 443 aa17.51■□□□□ 0.39
PFDN6-207ENST00000491382 DLX2Q07687 328 aaPredicted RBP17.51■□□□□ 0.39
PFDN6-207ENST00000491382 ALCAMQ13740 583 aa17.51■□□□□ 0.39
PFDN6-207ENST00000491382 PTPN14Q15678 1187 aa17.51■□□□□ 0.39
PFDN6-207ENST00000491382 HERC4Q5GLZ8 1057 aaPredicted RBP17.51■□□□□ 0.39
PFDN6-207ENST00000491382 GLRA4Q5JXX5 417 aa17.51■□□□□ 0.39
PFDN6-207ENST00000491382 KIAA1841Q6NSI8 718 aa17.51■□□□□ 0.39
PFDN6-207ENST00000491382 FUT10Q6P4F1 479 aa17.51■□□□□ 0.39
PFDN6-207ENST00000491382 ZNF720Q7Z2F6 126 aa17.51■□□□□ 0.39
PFDN6-207ENST00000491382 AUTS2Q8WXX7 1259 aa17.51■□□□□ 0.39
PFDN6-207ENST00000491382 SNX27Q96L92 541 aa17.51■□□□□ 0.39
PFDN6-207ENST00000491382 UROC1Q96N76 676 aa17.51■□□□□ 0.39
PFDN6-207ENST00000491382 PPP1R10Q96QC0 940 aaKnown RBP17.51■□□□□ 0.39
PFDN6-207ENST00000491382 UHRF1Q96T88 793 aaPredicted RBP17.51■□□□□ 0.39
PFDN6-207ENST00000491382 EMILIN2Q9BXX0 1053 aa17.51■□□□□ 0.39
PFDN6-207ENST00000491382 SCAND2PQ9GZW5 306 aaPredicted RBP17.51■□□□□ 0.39
PFDN6-207ENST00000491382 PANK4Q9NVE7 773 aa17.51■□□□□ 0.39
PFDN6-207ENST00000491382 KBTBD4Q9NVX7 518 aa17.51■□□□□ 0.39
PFDN6-207ENST00000491382 TCHHQ07283 1943 aa17.51■□□□□ 0.39
PFDN6-207ENST00000491382 SMIM28A0A1B0GU29 152 aa17.5■□□□□ 0.39
PFDN6-207ENST00000491382 GRXCR2A6NFK2 248 aa17.5■□□□□ 0.39
PFDN6-207ENST00000491382 POLR2DO15514 142 aaKnown RBP17.5■□□□□ 0.39
PFDN6-207ENST00000491382 GLP2RO95838 553 aa17.5■□□□□ 0.39
PFDN6-207ENST00000491382 CLTAP09496 248 aa17.5■□□□□ 0.39
PFDN6-207ENST00000491382 GLUD2P49448 558 aa17.5■□□□□ 0.39
PFDN6-207ENST00000491382 NUCB2P80303 420 aa17.5■□□□□ 0.39
PFDN6-207ENST00000491382 NAB2Q15742 525 aa17.5■□□□□ 0.39
PFDN6-207ENST00000491382 CLUL1Q15846 466 aa17.5■□□□□ 0.39
PFDN6-207ENST00000491382 ZC2HC1CQ53FD0 456 aaPredicted RBP17.5■□□□□ 0.39
PFDN6-207ENST00000491382 XKR4Q5GH76 650 aa17.5■□□□□ 0.39
PFDN6-207ENST00000491382 ALKAL1Q6UXT8 129 aa17.5■□□□□ 0.39
PFDN6-207ENST00000491382 TMEM184AQ6ZMB5 413 aa17.5■□□□□ 0.39
PFDN6-207ENST00000491382 PPFIBP1Q86W92 1011 aa17.5■□□□□ 0.39
PFDN6-207ENST00000491382 RNF168Q8IYW5 571 aaPredicted RBP17.5■□□□□ 0.39
PFDN6-207ENST00000491382 LEO1Q8WVC0 666 aaPredicted RBP17.5■□□□□ 0.39
PFDN6-207ENST00000491382 CASP10Q92851 521 aa17.5■□□□□ 0.39
PFDN6-207ENST00000491382 MSLNLQ96KJ4 702 aa17.5■□□□□ 0.39
PFDN6-207ENST00000491382 CNTN3Q9P232 1028 aa17.5■□□□□ 0.39
PFDN6-207ENST00000491382 BARX2Q9UMQ3 279 aaPredicted RBP17.5■□□□□ 0.39
PFDN6-207ENST00000491382 EXOC7Q9UPT5 735 aa17.5■□□□□ 0.39
PFDN6-207ENST00000491382 CUL9Q8IWT3 2517 aa17.5■□□□□ 0.39
PFDN6-207ENST00000491382 FRMD3A2A2Y4 597 aa17.49■□□□□ 0.39
PFDN6-207ENST00000491382 OGTO15294 1046 aa17.49■□□□□ 0.39
PFDN6-207ENST00000491382 CLASP2O75122 1294 aaKnown RBP17.49■□□□□ 0.39
PFDN6-207ENST00000491382 GCNT3O95395 438 aa17.49■□□□□ 0.39
PFDN6-207ENST00000491382 KCNE1P15382 129 aa17.49■□□□□ 0.39
PFDN6-207ENST00000491382 ELAVL2Q12926 359 aaKnown RBP17.49■□□□□ 0.39
PFDN6-207ENST00000491382 COASYQ13057 564 aa17.49■□□□□ 0.39
PFDN6-207ENST00000491382 SMAD4Q13485 552 aaKnown RBP17.49■□□□□ 0.39
PFDN6-207ENST00000491382 USP41Q3LFD5 358 aa17.49■□□□□ 0.39
PFDN6-207ENST00000491382 ADALQ6DHV7 355 aa17.49■□□□□ 0.39
PFDN6-207ENST00000491382 SLFN12LQ6IEE8 588 aa17.49■□□□□ 0.39
PFDN6-207ENST00000491382 LLGL2Q6P1M3 1020 aa17.49■□□□□ 0.39
PFDN6-207ENST00000491382 STXBP4Q6ZWJ1 553 aa17.49■□□□□ 0.39
PFDN6-207ENST00000491382 RABGGTAQ92696 567 aa17.49■□□□□ 0.39
PFDN6-207ENST00000491382 STAMQ92783 540 aa17.49■□□□□ 0.39
PFDN6-207ENST00000491382 PAAF1Q9BRP4 392 aa17.49■□□□□ 0.39
PFDN6-207ENST00000491382 MSTO1Q9BUK6 570 aa17.49■□□□□ 0.39
PFDN6-207ENST00000491382 TRIM9Q9C026 710 aa17.49■□□□□ 0.39
PFDN6-207ENST00000491382 CXCL16Q9H2A7 254 aa17.49■□□□□ 0.39
PFDN6-207ENST00000491382 TBC1D7Q9P0N9 293 aa17.49■□□□□ 0.39
PFDN6-207ENST00000491382 CLEC1BQ9P126 229 aa17.49■□□□□ 0.39
PFDN6-207ENST00000491382 KCNH3Q9ULD8 1083 aa17.49■□□□□ 0.39
PFDN6-207ENST00000491382 PCDHB13Q9Y5F0 798 aa17.49■□□□□ 0.39
PFDN6-207ENST00000491382 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.49■□□□□ 0.39
PFDN6-207ENST00000491382 HCFC2Q9Y5Z7 792 aa17.49■□□□□ 0.39
PFDN6-207ENST00000491382 F8W810 466 aa17.48■□□□□ 0.39
PFDN6-207ENST00000491382 C2CD2LO14523 706 aa17.48■□□□□ 0.39
PFDN6-207ENST00000491382 MBTPS2O43462 519 aa17.48■□□□□ 0.39
PFDN6-207ENST00000491382 PPP1R37O75864 691 aa17.48■□□□□ 0.39
PFDN6-207ENST00000491382 KIF4AO95239 1232 aa17.48■□□□□ 0.39
PFDN6-207ENST00000491382 EFEMP2O95967 443 aa17.48■□□□□ 0.39
PFDN6-207ENST00000491382 IL9P15248 144 aa17.48■□□□□ 0.39
PFDN6-207ENST00000491382 HOXB8P17481 243 aaPredicted RBP17.48■□□□□ 0.39
PFDN6-207ENST00000491382 ASIC1P78348 528 aa17.48■□□□□ 0.39
PFDN6-207ENST00000491382 DSG1Q02413 1049 aa17.48■□□□□ 0.39
PFDN6-207ENST00000491382 CREMQ03060 361 aa17.48■□□□□ 0.39
PFDN6-207ENST00000491382 PPP2R3AQ06190 1150 aa17.48■□□□□ 0.39
PFDN6-207ENST00000491382 KCNC3Q14003 757 aa17.48■□□□□ 0.39
PFDN6-207ENST00000491382 SEZ6Q53EL9 994 aa17.48■□□□□ 0.39
PFDN6-207ENST00000491382 GPR65Q8IYL9 337 aa17.48■□□□□ 0.39
PFDN6-207ENST00000491382 CEP57L1Q8IYX8 460 aa17.48■□□□□ 0.39
PFDN6-207ENST00000491382 SMRP1Q8NCR6 262 aa17.48■□□□□ 0.39
PFDN6-207ENST00000491382 VN1R2Q8NFZ6 395 aa17.48■□□□□ 0.39
PFDN6-207ENST00000491382 DDX27Q96GQ7 796 aaKnown RBP17.48■□□□□ 0.39
PFDN6-207ENST00000491382 ACCSQ96QU6 501 aa17.48■□□□□ 0.39
PFDN6-207ENST00000491382 HAPLN2Q9GZV7 340 aa17.48■□□□□ 0.39
PFDN6-207ENST00000491382 PLEKHA5Q9HAU0 1116 aa17.48■□□□□ 0.39
PFDN6-207ENST00000491382 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP17.48■□□□□ 0.392e-7■■■■■ 43.8
PFDN6-207ENST00000491382 CACNG4Q9UBN1 327 aa17.48■□□□□ 0.39
PFDN6-207ENST00000491382 SPTBN5Q9NRC6 3674 aaKnown RBP17.47■□□□□ 0.39
PFDN6-207ENST00000491382 A0A0B4J269 797 aa17.47■□□□□ 0.39
PFDN6-207ENST00000491382 TMEM189-UBE2V1I3L0A0 370 aa17.47■□□□□ 0.39
PFDN6-207ENST00000491382 B3GAT3O94766 335 aa17.47■□□□□ 0.39
PFDN6-207ENST00000491382 ADH1AP07327 375 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms