RNA–Protein interactions for RNA: ENST00000491183.5

HMGN1-219, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 527 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-219ENST00000491183 ZDHHC14Q8IZN3 488 aa19.76■□□□□ 0.75
HMGN1-219ENST00000491183 CMASQ8NFW8 434 aaPredicted RBP19.76■□□□□ 0.75
HMGN1-219ENST00000491183 ZBTB45Q96K62 511 aaPredicted RBP19.76■□□□□ 0.75
HMGN1-219ENST00000491183 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP19.76■□□□□ 0.75
HMGN1-219ENST00000491183 SF3B1O75533 1304 aaKnown RBP eCLIP19.76■□□□□ 0.754e-6■□□□□ 8.6
HMGN1-219ENST00000491183 SMIM28A0A1B0GU29 152 aa19.75■□□□□ 0.75
HMGN1-219ENST00000491183 CCDC195A0A1B0GUA6 201 aa19.75■□□□□ 0.75
HMGN1-219ENST00000491183 VPS37CA5D8V6 355 aaPredicted RBP19.75■□□□□ 0.75
HMGN1-219ENST00000491183 SPDYE4A6NLX3 237 aa19.75■□□□□ 0.75
HMGN1-219ENST00000491183 SLC26A4O43511 780 aa19.75■□□□□ 0.75
HMGN1-219ENST00000491183 TGM5O43548 720 aa19.75■□□□□ 0.75
HMGN1-219ENST00000491183 RFPL2O75678 378 aa19.75■□□□□ 0.75
HMGN1-219ENST00000491183 PLA2G5P39877 138 aa19.75■□□□□ 0.75
HMGN1-219ENST00000491183 UBA7P41226 1012 aa19.75■□□□□ 0.75
HMGN1-219ENST00000491183 OSTNP61366 133 aa19.75■□□□□ 0.75
HMGN1-219ENST00000491183 CACNB1Q02641 598 aaPredicted RBP19.75■□□□□ 0.75
HMGN1-219ENST00000491183 FAM171A1Q5VUB5 890 aa19.75■□□□□ 0.75
HMGN1-219ENST00000491183 CD300LGQ6UXG3 332 aa19.75■□□□□ 0.75
HMGN1-219ENST00000491183 APBB1IPQ7Z5R6 666 aaPredicted RBP19.75■□□□□ 0.75
HMGN1-219ENST00000491183 TMEM161BQ8NDZ6 487 aa19.75■□□□□ 0.75
HMGN1-219ENST00000491183 LNX1Q8TBB1 728 aaPredicted RBP19.75■□□□□ 0.75
HMGN1-219ENST00000491183 CCDC94Q9BW85 323 aaPredicted RBP19.75■□□□□ 0.75
HMGN1-219ENST00000491183 BLOC1S4Q9NUP1 217 aa19.75■□□□□ 0.75
HMGN1-219ENST00000491183 KCND2Q9NZV8 630 aa19.75■□□□□ 0.75
HMGN1-219ENST00000491183 USTQ9Y2C2 406 aa19.75■□□□□ 0.75
HMGN1-219ENST00000491183 VWA8A3KMH1 1905 aa19.74■□□□□ 0.75
HMGN1-219ENST00000491183 MEFVO15553 781 aaPredicted RBP19.74■□□□□ 0.75
HMGN1-219ENST00000491183 BRD1O95696 1058 aa19.74■□□□□ 0.75
HMGN1-219ENST00000491183 BMP15O95972 392 aa19.74■□□□□ 0.75
HMGN1-219ENST00000491183 C1RP00736 705 aa19.74■□□□□ 0.75
HMGN1-219ENST00000491183 MAPTP10636 758 aaKnown RBP19.74■□□□□ 0.75
HMGN1-219ENST00000491183 MCF2P10911 925 aa19.74■□□□□ 0.75
HMGN1-219ENST00000491183 CLCNKBP51801 687 aa19.74■□□□□ 0.75
HMGN1-219ENST00000491183 SIGLEC14Q08ET2 396 aa19.74■□□□□ 0.75
HMGN1-219ENST00000491183 CEP57Q86XR8 500 aa19.74■□□□□ 0.75
HMGN1-219ENST00000491183 KREMEN2Q8NCW0 462 aa19.74■□□□□ 0.75
HMGN1-219ENST00000491183 HDAC7Q8WUI4 952 aa19.74■□□□□ 0.75
HMGN1-219ENST00000491183 PIK3R5Q8WYR1 880 aa19.74■□□□□ 0.75
HMGN1-219ENST00000491183 PBXIP1Q96AQ6 731 aa19.74■□□□□ 0.75
HMGN1-219ENST00000491183 FAM122AQ96E09 287 aa19.74■□□□□ 0.75
HMGN1-219ENST00000491183 ASIC4Q96FT7 647 aa19.74■□□□□ 0.75
HMGN1-219ENST00000491183 CLSTN3Q9BQT9 956 aa19.74■□□□□ 0.75
HMGN1-219ENST00000491183 TCHPQ9BT92 498 aa19.74■□□□□ 0.75
HMGN1-219ENST00000491183 TTPALQ9BTX7 342 aa19.74■□□□□ 0.75
HMGN1-219ENST00000491183 GOLGA2P5Q9HBQ8 144 aa19.74■□□□□ 0.75
HMGN1-219ENST00000491183 LIMD1Q9UGP4 676 aa19.74■□□□□ 0.75
HMGN1-219ENST00000491183 CLIC4Q9Y696 253 aa19.74■□□□□ 0.75
HMGN1-219ENST00000491183 TMEM189-UBE2V1I3L0A0 370 aa19.73■□□□□ 0.75
HMGN1-219ENST00000491183 PAPLNO95428 1278 aa19.73■□□□□ 0.75
HMGN1-219ENST00000491183 ASGR2P07307 311 aa19.73■□□□□ 0.75
HMGN1-219ENST00000491183 LONP1P36776 959 aaKnown RBP19.73■□□□□ 0.75
HMGN1-219ENST00000491183 SOX4Q06945 474 aaPredicted RBP19.73■□□□□ 0.75
HMGN1-219ENST00000491183 DHX8Q14562 1220 aaKnown RBP19.73■□□□□ 0.75
HMGN1-219ENST00000491183 KARSQ15046 597 aaKnown RBP19.73■□□□□ 0.75
HMGN1-219ENST00000491183 PTPAQ15257 358 aa19.73■□□□□ 0.75
HMGN1-219ENST00000491183 UPP1Q16831 310 aa19.73■□□□□ 0.75
HMGN1-219ENST00000491183 DCLRE1AQ6PJP8 1040 aa19.73■□□□□ 0.75
HMGN1-219ENST00000491183 MPZL3Q6UWV2 235 aa19.73■□□□□ 0.75
HMGN1-219ENST00000491183 TDRD5Q8NAT2 981 aaKnown RBP19.73■□□□□ 0.75
HMGN1-219ENST00000491183 ZNF707Q96C28 371 aaPredicted RBP19.73■□□□□ 0.75
HMGN1-219ENST00000491183 CALML4Q96GE6 196 aa19.73■□□□□ 0.75
HMGN1-219ENST00000491183 MFSD14AQ96MC6 490 aa19.73■□□□□ 0.75
HMGN1-219ENST00000491183 ZMAT2Q96NC0 199 aaKnown RBP19.73■□□□□ 0.75
HMGN1-219ENST00000491183 PLEKHA4Q9H4M7 779 aa19.73■□□□□ 0.75
HMGN1-219ENST00000491183 DPP7Q9UHL4 492 aa19.73■□□□□ 0.75
HMGN1-219ENST00000491183 KCNG1Q9UIX4 513 aa19.73■□□□□ 0.75
HMGN1-219ENST00000491183 CITO14578 2027 aa19.72■□□□□ 0.75
HMGN1-219ENST00000491183 ADAM12O43184 909 aa19.72■□□□□ 0.75
HMGN1-219ENST00000491183 B3GAT3O94766 335 aa19.72■□□□□ 0.75
HMGN1-219ENST00000491183 PDCP20941 246 aa19.72■□□□□ 0.75
HMGN1-219ENST00000491183 SYT1P21579 422 aa19.72■□□□□ 0.75
HMGN1-219ENST00000491183 SMTNP53814 917 aa19.72■□□□□ 0.75
HMGN1-219ENST00000491183 YARSP54577 528 aaKnown RBP19.72■□□□□ 0.75
HMGN1-219ENST00000491183 STRN3Q13033 797 aa19.72■□□□□ 0.75
HMGN1-219ENST00000491183 RESTQ13127 1097 aa19.72■□□□□ 0.75
HMGN1-219ENST00000491183 FAM173BQ6P4H8 233 aa19.72■□□□□ 0.75
HMGN1-219ENST00000491183 CCDC149Q6ZUS6 474 aa19.72■□□□□ 0.75
HMGN1-219ENST00000491183 GPBP1Q86WP2 473 aa19.72■□□□□ 0.75
HMGN1-219ENST00000491183 PLCD3Q8N3E9 789 aa19.72■□□□□ 0.75
HMGN1-219ENST00000491183 C3orf58Q8NDZ4 430 aa19.72■□□□□ 0.75
HMGN1-219ENST00000491183 ACAP3Q96P50 834 aa19.72■□□□□ 0.75
HMGN1-219ENST00000491183 REEP2Q9BRK0 252 aa19.72■□□□□ 0.75
HMGN1-219ENST00000491183 RHOBTB2Q9BYZ6 727 aa19.72■□□□□ 0.75
HMGN1-219ENST00000491183 HAPLN2Q9GZV7 340 aa19.72■□□□□ 0.75
HMGN1-219ENST00000491183 SMOC2Q9H3U7 446 aa19.72■□□□□ 0.75
HMGN1-219ENST00000491183 TOPORSQ9NS56 1045 aaPredicted RBP19.72■□□□□ 0.75
HMGN1-219ENST00000491183 SORCS3Q9UPU3 1222 aa19.72■□□□□ 0.75
HMGN1-219ENST00000491183 ZNF318Q5VUA4 2279 aa19.72■□□□□ 0.75
HMGN1-219ENST00000491183 TOM1L1O75674 476 aa19.71■□□□□ 0.75
HMGN1-219ENST00000491183 HARSP12081 509 aaKnown RBP19.71■□□□□ 0.75
HMGN1-219ENST00000491183 PLCG1P19174 1290 aa19.71■□□□□ 0.75
HMGN1-219ENST00000491183 FGFR3P22607 806 aa19.71■□□□□ 0.75
HMGN1-219ENST00000491183 NCKAP1LP55160 1127 aa19.71■□□□□ 0.75
HMGN1-219ENST00000491183 CREMQ03060 361 aa19.71■□□□□ 0.75
HMGN1-219ENST00000491183 ELAVL2Q12926 359 aaKnown RBP19.71■□□□□ 0.75
HMGN1-219ENST00000491183 MCM6Q14566 821 aa19.71■□□□□ 0.75
HMGN1-219ENST00000491183 PSMD5Q16401 504 aa19.71■□□□□ 0.75
HMGN1-219ENST00000491183 SEZ6Q53EL9 994 aa19.71■□□□□ 0.75
HMGN1-219ENST00000491183 CYP26C1Q6V0L0 522 aa19.71■□□□□ 0.75
HMGN1-219ENST00000491183 ZPBP2Q6X784 338 aa19.71■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms