RNA–Protein interactions for RNA: ENST00000491094.6

VPS72-205, Transcript of vacuolar protein sorting 72 homolog, humanhuman

TSL 5

Gene VPS72, Length 4,267 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS72-205ENST00000491094 DNAJC3Q13217 504 aa11.91□□□□□ -0.5
VPS72-205ENST00000491094 SNRNP35Q16560 246 aaKnown RBP11.91□□□□□ -0.5
VPS72-205ENST00000491094 SPOPLQ6IQ16 392 aa11.91□□□□□ -0.5
VPS72-205ENST00000491094 RUNDC3BQ96NL0 473 aa11.91□□□□□ -0.5
VPS72-205ENST00000491094 HERPUD2Q9BSE4 406 aa11.91□□□□□ -0.5
VPS72-205ENST00000491094 PLVAPQ9BX97 442 aa11.91□□□□□ -0.5
VPS72-205ENST00000491094 PITPNM3Q9BZ71 974 aa11.91□□□□□ -0.5
VPS72-205ENST00000491094 VPS37BQ9H9H4 285 aa11.91□□□□□ -0.5
VPS72-205ENST00000491094 DMAC2Q9NW81 257 aa11.91□□□□□ -0.5
VPS72-205ENST00000491094 ATXN2Q99700 1313 aaKnown RBP11.91□□□□□ -0.5
VPS72-205ENST00000491094 NFIBO00712 420 aa11.91□□□□□ -0.5
VPS72-205ENST00000491094 GAS8O95995 478 aa11.91□□□□□ -0.5
VPS72-205ENST00000491094 MMP10P09238 476 aa11.91□□□□□ -0.5
VPS72-205ENST00000491094 ZSCAN5DPP0CG00 497 aa11.91□□□□□ -0.5
VPS72-205ENST00000491094 SPATA21Q7Z572 469 aa11.91□□□□□ -0.5
VPS72-205ENST00000491094 CERKQ8TCT0 537 aa11.91□□□□□ -0.5
VPS72-205ENST00000491094 FAM213AQ9BRX8 229 aa11.91□□□□□ -0.5
VPS72-205ENST00000491094 SEL1LQ9UBV2 794 aa11.91□□□□□ -0.5
VPS72-205ENST00000491094 MCM8Q9UJA3 840 aa11.91□□□□□ -0.5
VPS72-205ENST00000491094 XIRP1Q702N8 1843 aaKnown RBP11.91□□□□□ -0.5
VPS72-205ENST00000491094 KRT16P08779 473 aa11.9□□□□□ -0.5
VPS72-205ENST00000491094 PSMC4P43686 418 aa11.9□□□□□ -0.5
VPS72-205ENST00000491094 VPS72Q15906 364 aa11.9□□□□□ -0.5
VPS72-205ENST00000491094 ZNF394Q53GI3 561 aa11.9□□□□□ -0.5
VPS72-205ENST00000491094 SYCP2LQ5T4T6 812 aa11.9□□□□□ -0.5
VPS72-205ENST00000491094 ZDHHC15Q96MV8 337 aa11.9□□□□□ -0.5
VPS72-205ENST00000491094 KIF9Q9HAQ2 790 aa11.9□□□□□ -0.5
VPS72-205ENST00000491094 ZNF148Q9UQR1 794 aa11.9□□□□□ -0.5
VPS72-205ENST00000491094 MRPL11Q9Y3B7 192 aaKnown RBP11.9□□□□□ -0.5
VPS72-205ENST00000491094 DENND3A2RUS2 1198 aa11.9□□□□□ -0.5
VPS72-205ENST00000491094 HNRNPDLO14979 420 aaKnown RBP11.9□□□□□ -0.5
VPS72-205ENST00000491094 HSPA6P17066 643 aa11.9□□□□□ -0.5
VPS72-205ENST00000491094 CHRNA5P30532 468 aa11.9□□□□□ -0.5
VPS72-205ENST00000491094 PIGWQ7Z7B1 504 aa11.9□□□□□ -0.5
VPS72-205ENST00000491094 RMDN2Q96LZ7 410 aa11.9□□□□□ -0.5
VPS72-205ENST00000491094 NAALADL1Q9UQQ1 740 aa11.9□□□□□ -0.5
VPS72-205ENST00000491094 ZBTB12Q9Y330 459 aaPredicted RBP11.9□□□□□ -0.5
VPS72-205ENST00000491094 COL22A1Q8NFW1 1626 aaPredicted RBP11.9□□□□□ -0.5
VPS72-205ENST00000491094 LAMB1P07942 1786 aa11.9□□□□□ -0.5
VPS72-205ENST00000491094 ASAP2O43150 1006 aa11.9□□□□□ -0.5
VPS72-205ENST00000491094 NQO1P15559 274 aaKnown RBP11.9□□□□□ -0.5
VPS72-205ENST00000491094 LACTB2Q53H82 288 aaPredicted RBP11.9□□□□□ -0.5
VPS72-205ENST00000491094 TMEM237Q96Q45 408 aa11.9□□□□□ -0.5
VPS72-205ENST00000491094 SYT11Q9BT88 431 aa11.9□□□□□ -0.5
VPS72-205ENST00000491094 C10orf88Q9H8K7 445 aa11.9□□□□□ -0.5
VPS72-205ENST00000491094 RAVER2Q9HCJ3 691 aaKnown RBP11.9□□□□□ -0.5
VPS72-205ENST00000491094 SAYSD1Q9NPB0 183 aa11.9□□□□□ -0.5
VPS72-205ENST00000491094 PCYOX1Q9UHG3 505 aa11.9□□□□□ -0.5
VPS72-205ENST00000491094 STK24Q9Y6E0 443 aa11.9□□□□□ -0.5
VPS72-205ENST00000491094 A0A1B0GUA9 196 aa11.89□□□□□ -0.51
VPS72-205ENST00000491094 MYBL1P10243 752 aa11.89□□□□□ -0.51
VPS72-205ENST00000491094 CNGA1P29973 690 aa11.89□□□□□ -0.51
VPS72-205ENST00000491094 DYNLT1P63172 113 aa11.89□□□□□ -0.51
VPS72-205ENST00000491094 SEZ6Q53EL9 994 aa11.89□□□□□ -0.51
VPS72-205ENST00000491094 FITM2Q8N6M3 262 aa11.89□□□□□ -0.51
VPS72-205ENST00000491094 C3orf20Q8ND61 904 aa11.89□□□□□ -0.51
VPS72-205ENST00000491094 KIFAP3Q92845 792 aa11.89□□□□□ -0.51
VPS72-205ENST00000491094 KLF6Q99612 283 aaPredicted RBP11.89□□□□□ -0.51
VPS72-205ENST00000491094 TMEM206Q9H813 350 aa11.89□□□□□ -0.51
VPS72-205ENST00000491094 EHMT1Q9H9B1 1298 aa11.89□□□□□ -0.51
VPS72-205ENST00000491094 SLCO1B3Q9NPD5 702 aa11.89□□□□□ -0.51
VPS72-205ENST00000491094 FRMPD4Q14CM0 1322 aa11.89□□□□□ -0.51
VPS72-205ENST00000491094 ETS1P14921 441 aa11.89□□□□□ -0.51
VPS72-205ENST00000491094 CTNNA2P26232 953 aa11.89□□□□□ -0.51
VPS72-205ENST00000491094 HOXA10P31260 410 aaPredicted RBP11.89□□□□□ -0.51
VPS72-205ENST00000491094 YWHABP31946 246 aaKnown RBP11.89□□□□□ -0.51
VPS72-205ENST00000491094 CYFIP1Q7L576 1253 aa11.89□□□□□ -0.51
VPS72-205ENST00000491094 SEPT12Q8IYM1 358 aa11.89□□□□□ -0.51
VPS72-205ENST00000491094 CHURC1Q8WUH1 139 aa11.89□□□□□ -0.51
VPS72-205ENST00000491094 ART4Q93070 314 aa11.89□□□□□ -0.51
VPS72-205ENST00000491094 PCDHA3Q9Y5H8 950 aa11.89□□□□□ -0.51
VPS72-205ENST00000491094 COL14A1Q05707 1796 aaKnown RBP11.89□□□□□ -0.51
VPS72-205ENST00000491094 NAV1Q8NEY1 1877 aa11.89□□□□□ -0.51
VPS72-205ENST00000491094 GOLGA8RI6L899 631 aa11.89□□□□□ -0.51
VPS72-205ENST00000491094 DNAJC8O75937 253 aaPredicted RBP11.89□□□□□ -0.51
VPS72-205ENST00000491094 CETPP11597 493 aa11.89□□□□□ -0.51
VPS72-205ENST00000491094 RARRES1P49788 294 aa11.89□□□□□ -0.51
VPS72-205ENST00000491094 SESN3P58005 492 aa11.89□□□□□ -0.51
VPS72-205ENST00000491094 NCALDP61601 193 aa11.89□□□□□ -0.51
VPS72-205ENST00000491094 SEPT7Q16181 437 aaKnown RBP11.89□□□□□ -0.51
VPS72-205ENST00000491094 IZUMO3Q5VZ72 239 aa11.89□□□□□ -0.51
VPS72-205ENST00000491094 GMCL1Q96IK5 515 aa11.89□□□□□ -0.51
VPS72-205ENST00000491094 RPS6KC1Q96S38 1066 aa11.89□□□□□ -0.51
VPS72-205ENST00000491094 CCDC77Q9BR77 488 aa11.89□□□□□ -0.51
VPS72-205ENST00000491094 SRRM3A6NNA2 597 aaPredicted RBP11.89□□□□□ -0.51
VPS72-205ENST00000491094 MGRN1O60291 552 aa11.89□□□□□ -0.51
VPS72-205ENST00000491094 P4HBP07237 508 aaKnown RBP11.89□□□□□ -0.51
VPS72-205ENST00000491094 NSFP46459 744 aaKnown RBP11.89□□□□□ -0.51
VPS72-205ENST00000491094 ACOT2P49753 483 aa11.89□□□□□ -0.51
VPS72-205ENST00000491094 DRG2P55039 364 aaKnown RBP11.89□□□□□ -0.51
VPS72-205ENST00000491094 PPP2R5CQ13362 524 aa11.89□□□□□ -0.51
VPS72-205ENST00000491094 UGCGQ16739 394 aa11.89□□□□□ -0.51
VPS72-205ENST00000491094 KRT39Q6A163 491 aa11.89□□□□□ -0.51
VPS72-205ENST00000491094 C11orf63Q6NUN7 778 aa11.89□□□□□ -0.51
VPS72-205ENST00000491094 PODNQ7Z5L7 613 aa11.89□□□□□ -0.51
VPS72-205ENST00000491094 ERICH1Q86X53 443 aa11.89□□□□□ -0.51
VPS72-205ENST00000491094 CENPTQ96BT3 561 aa11.89□□□□□ -0.51
VPS72-205ENST00000491094 RAB20Q9NX57 234 aa11.89□□□□□ -0.51
VPS72-205ENST00000491094 ABCA3Q99758 1704 aa11.88□□□□□ -0.51
VPS72-205ENST00000491094 EXOC1LA0A1B0GW35 172 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms