RNA–Protein interactions for RNA: ENST00000491075.1

CLIP2-208, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 1 (best)

Gene CLIP2, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-208ENST00000491075 NOTCH4Q99466 2003 aa22.86■■□□□ 1.25
CLIP2-208ENST00000491075 CCL16O15467 120 aa22.85■■□□□ 1.25
CLIP2-208ENST00000491075 LAMTOR5O43504 91 aa22.85■■□□□ 1.25
CLIP2-208ENST00000491075 USO1O60763 962 aaKnown RBP22.85■■□□□ 1.25
CLIP2-208ENST00000491075 THP07101 528 aa22.85■■□□□ 1.25
CLIP2-208ENST00000491075 MAGEA9P43362 315 aa22.85■■□□□ 1.25
CLIP2-208ENST00000491075 CALCRLQ16602 461 aa22.85■■□□□ 1.25
CLIP2-208ENST00000491075 RSPO2Q6UXX9 243 aaPredicted RBP22.85■■□□□ 1.25
CLIP2-208ENST00000491075 DCLK2Q8N568 766 aa22.85■■□□□ 1.25
CLIP2-208ENST00000491075 TTC12Q9H892 705 aaPredicted RBP22.85■■□□□ 1.25
CLIP2-208ENST00000491075 FAM205CA6NFA0 338 aa22.84■■□□□ 1.25
CLIP2-208ENST00000491075 PTGESO14684 152 aa22.84■■□□□ 1.25
CLIP2-208ENST00000491075 N4BP3O15049 544 aa22.84■■□□□ 1.25
CLIP2-208ENST00000491075 KRT2P35908 639 aa22.84■■□□□ 1.25
CLIP2-208ENST00000491075 UBXN2BQ14CS0 331 aa22.84■■□□□ 1.25
CLIP2-208ENST00000491075 FAM187BQ17R55 369 aa22.84■■□□□ 1.25
CLIP2-208ENST00000491075 SLC44A4Q53GD3 710 aa22.84■■□□□ 1.25
CLIP2-208ENST00000491075 CDCA2Q69YH5 1023 aaPredicted RBP22.84■■□□□ 1.25
CLIP2-208ENST00000491075 ZBTB8OSQ8IWT0 167 aa22.84■■□□□ 1.25
CLIP2-208ENST00000491075 SLC7A14Q8TBB6 771 aa22.84■■□□□ 1.25
CLIP2-208ENST00000491075 PIGOQ8TEQ8 1089 aa22.84■■□□□ 1.25
CLIP2-208ENST00000491075 WASF1Q92558 559 aa22.84■■□□□ 1.25
CLIP2-208ENST00000491075 BRMS1Q9HCU9 246 aa22.84■■□□□ 1.25
CLIP2-208ENST00000491075 XRCC6P12956 609 aaKnown RBP eCLIP22.83■■□□□ 1.25
CLIP2-208ENST00000491075 NR5A1Q13285 461 aa22.83■■□□□ 1.25
CLIP2-208ENST00000491075 UVSSAQ2YD98 709 aa22.83■■□□□ 1.25
CLIP2-208ENST00000491075 AXDND1Q5T1B0 1012 aaPredicted RBP22.83■■□□□ 1.25
CLIP2-208ENST00000491075 PDZRN4Q6ZMN7 1036 aaPredicted RBP22.83■■□□□ 1.25
CLIP2-208ENST00000491075 RTL10Q7L3V2 364 aa22.83■■□□□ 1.25
CLIP2-208ENST00000491075 MCPH1Q8NEM0 835 aa22.83■■□□□ 1.25
CLIP2-208ENST00000491075 ITFG1Q8TB96 612 aa22.83■■□□□ 1.25
CLIP2-208ENST00000491075 FZD8Q9H461 694 aa22.83■■□□□ 1.25
CLIP2-208ENST00000491075 KCNH3Q9ULD8 1083 aa22.83■■□□□ 1.25
CLIP2-208ENST00000491075 PCDHGA2Q9Y5H1 932 aa22.83■■□□□ 1.25
CLIP2-208ENST00000491075 ADAM12O43184 909 aa22.82■■□□□ 1.24
CLIP2-208ENST00000491075 NEMFO60524 1076 aa22.82■■□□□ 1.24
CLIP2-208ENST00000491075 RECQL4O94761 1208 aa22.82■■□□□ 1.24
CLIP2-208ENST00000491075 RAB33AQ14088 237 aa22.82■■□□□ 1.24
CLIP2-208ENST00000491075 NAB2Q15742 525 aa22.82■■□□□ 1.24
CLIP2-208ENST00000491075 PABPC1LQ4VXU2 614 aaKnown RBP22.82■■□□□ 1.24
CLIP2-208ENST00000491075 NPAS3Q8IXF0 933 aa22.82■■□□□ 1.24
CLIP2-208ENST00000491075 TNFRSF25Q93038 417 aa22.82■■□□□ 1.24
CLIP2-208ENST00000491075 KXD1Q9BQD3 176 aa22.82■■□□□ 1.24
CLIP2-208ENST00000491075 ADPGKQ9BRR6 497 aa22.82■■□□□ 1.24
CLIP2-208ENST00000491075 C2orf40Q9H1Z8 148 aa22.82■■□□□ 1.24
CLIP2-208ENST00000491075 PDZD7Q9H5P4 517 aa22.82■■□□□ 1.24
CLIP2-208ENST00000491075 LTB4R2Q9NPC1 389 aa22.82■■□□□ 1.24
CLIP2-208ENST00000491075 GPRC5CQ9NQ84 441 aa22.82■■□□□ 1.24
CLIP2-208ENST00000491075 SNTG2Q9NY99 539 aa22.82■■□□□ 1.24
CLIP2-208ENST00000491075 NCDNQ9UBB6 729 aa22.82■■□□□ 1.24
CLIP2-208ENST00000491075 ORC3Q9UBD5 711 aaPredicted RBP22.82■■□□□ 1.24
CLIP2-208ENST00000491075 NCOR2Q9Y618 2525 aa22.82■■□□□ 1.24
CLIP2-208ENST00000491075 GPR179Q6PRD1 2367 aa22.81■■□□□ 1.24
CLIP2-208ENST00000491075 FAM170BA6NMN3 283 aa22.81■■□□□ 1.24
CLIP2-208ENST00000491075 PFKFB2O60825 505 aa22.81■■□□□ 1.24
CLIP2-208ENST00000491075 TMEM132AQ24JP5 1023 aa22.81■■□□□ 1.24
CLIP2-208ENST00000491075 MTF2Q9Y483 593 aaPredicted RBP22.81■■□□□ 1.24
CLIP2-208ENST00000491075 TRIP11Q15643 1979 aa22.8■■□□□ 1.24
CLIP2-208ENST00000491075 OR1D2P34982 312 aa22.8■■□□□ 1.24
CLIP2-208ENST00000491075 TXKP42681 527 aa22.8■■□□□ 1.24
CLIP2-208ENST00000491075 CSTF1Q05048 431 aaKnown RBP22.8■■□□□ 1.24
CLIP2-208ENST00000491075 PRPF4BQ13523 1007 aaKnown RBP22.8■■□□□ 1.24
CLIP2-208ENST00000491075 VARS2Q5ST30 1063 aaKnown RBP22.8■■□□□ 1.24
CLIP2-208ENST00000491075 ZBTB41Q5SVQ8 909 aa22.8■■□□□ 1.24
CLIP2-208ENST00000491075 MAEAQ7L5Y9 396 aa22.8■■□□□ 1.24
CLIP2-208ENST00000491075 GPR161Q8N6U8 529 aaKnown RBP22.8■■□□□ 1.24
CLIP2-208ENST00000491075 ATRIPQ8WXE1 791 aa22.8■■□□□ 1.24
CLIP2-208ENST00000491075 NELL2Q99435 816 aa22.8■■□□□ 1.24
CLIP2-208ENST00000491075 HCFC1R1Q9NWW0 138 aa22.8■■□□□ 1.24
CLIP2-208ENST00000491075 MTRRQ9UBK8 725 aa22.8■■□□□ 1.24
CLIP2-208ENST00000491075 DAXXQ9UER7 740 aaPredicted RBP22.8■■□□□ 1.24
CLIP2-208ENST00000491075 TMEM189-UBE2V1I3L0A0 370 aa22.79■■□□□ 1.24
CLIP2-208ENST00000491075 NCAM2O15394 837 aa22.79■■□□□ 1.24
CLIP2-208ENST00000491075 SDHBP21912 280 aa22.79■■□□□ 1.24
CLIP2-208ENST00000491075 FGFR3P22607 806 aa22.79■■□□□ 1.24
CLIP2-208ENST00000491075 MAPK6Q16659 721 aa22.79■■□□□ 1.24
CLIP2-208ENST00000491075 RSPO4Q2I0M5 234 aaPredicted RBP22.79■■□□□ 1.24
CLIP2-208ENST00000491075 SECISBP2LQ93073 1101 aaKnown RBP22.79■■□□□ 1.24
CLIP2-208ENST00000491075 DNMT3BQ9UBC3 853 aaKnown RBP22.79■■□□□ 1.24
CLIP2-208ENST00000491075 TPCN1Q9ULQ1 816 aa22.79■■□□□ 1.24
CLIP2-208ENST00000491075 TTLL13PA6NNM8 815 aa22.78■■□□□ 1.24
CLIP2-208ENST00000491075 ECI2O75521 394 aa22.78■■□□□ 1.24
CLIP2-208ENST00000491075 CTDNEP1O95476 244 aa22.78■■□□□ 1.24
CLIP2-208ENST00000491075 PRKCBP05771 671 aa22.78■■□□□ 1.24
CLIP2-208ENST00000491075 ATP2B1P20020 1258 aa22.78■■□□□ 1.24
CLIP2-208ENST00000491075 CD72P21854 359 aa22.78■■□□□ 1.24
CLIP2-208ENST00000491075 RPS9P46781 194 aaKnown RBP22.78■■□□□ 1.24
CLIP2-208ENST00000491075 RBM25P49756 843 aaKnown RBP22.78■■□□□ 1.24
CLIP2-208ENST00000491075 TPRG1Q6ZUI0 275 aa22.78■■□□□ 1.24
CLIP2-208ENST00000491075 NOSTRINQ8IVI9 506 aa22.78■■□□□ 1.24
CLIP2-208ENST00000491075 ZBTB44Q8NCP5 570 aa22.78■■□□□ 1.24
CLIP2-208ENST00000491075 ING5Q8WYH8 240 aa22.78■■□□□ 1.24
CLIP2-208ENST00000491075 CLDN23Q96B33 292 aa22.78■■□□□ 1.24
CLIP2-208ENST00000491075 MTMR9Q96QG7 549 aa22.78■■□□□ 1.24
CLIP2-208ENST00000491075 TUFT1Q9NNX1 390 aa22.78■■□□□ 1.24
CLIP2-208ENST00000491075 ZSCAN32Q9NX65 697 aa22.78■■□□□ 1.24
CLIP2-208ENST00000491075 GDE1Q9NZC3 331 aa22.78■■□□□ 1.24
CLIP2-208ENST00000491075 MRPS23Q9Y3D9 190 aaKnown RBP22.78■■□□□ 1.24
CLIP2-208ENST00000491075 A0A087WWV3 80 aa22.77■■□□□ 1.24
CLIP2-208ENST00000491075 ACKR2O00590 384 aa22.77■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms