RNA–Protein interactions for RNA: ENST00000490796.1

SREBF1-216, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 698 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-216ENST00000490796 DMP1Q13316 513 aaPredicted RBP21.68■■□□□ 1.06
SREBF1-216ENST00000490796 ZRSR1Q15695 479 aaKnown RBP21.68■■□□□ 1.06
SREBF1-216ENST00000490796 LILRA6Q6PI73 481 aa21.68■■□□□ 1.06
SREBF1-216ENST00000490796 GET4Q7L5D6 327 aaPredicted RBP21.68■■□□□ 1.06
SREBF1-216ENST00000490796 TMEM105Q8N8V8 129 aa21.68■■□□□ 1.06
SREBF1-216ENST00000490796 IGSF22Q8N9C0 903 aa21.68■■□□□ 1.06
SREBF1-216ENST00000490796 ZNF707Q96C28 371 aaPredicted RBP21.68■■□□□ 1.06
SREBF1-216ENST00000490796 DRC1Q96MC2 740 aa21.68■■□□□ 1.06
SREBF1-216ENST00000490796 CCDC94Q9BW85 323 aaPredicted RBP21.68■■□□□ 1.06
SREBF1-216ENST00000490796 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP21.68■■□□□ 1.062e-17■■■■■ 51.1
SREBF1-216ENST00000490796 PHLPP2Q6ZVD8 1323 aa21.68■■□□□ 1.06
SREBF1-216ENST00000490796 PLXNA3P51805 1871 aa21.68■■□□□ 1.06
SREBF1-216ENST00000490796 E9PMD0 336 aa21.67■■□□□ 1.06
SREBF1-216ENST00000490796 RABEP1Q15276 862 aa21.67■■□□□ 1.06
SREBF1-216ENST00000490796 GLRA4Q5JXX5 417 aa21.67■■□□□ 1.06
SREBF1-216ENST00000490796 NT5DC1Q5TFE4 455 aa21.67■■□□□ 1.06
SREBF1-216ENST00000490796 SIX5Q8N196 739 aa21.67■■□□□ 1.06
SREBF1-216ENST00000490796 NXPE3Q969Y0 559 aa21.67■■□□□ 1.06
SREBF1-216ENST00000490796 MYADMQ96S97 322 aa21.67■■□□□ 1.06
SREBF1-216ENST00000490796 TCHPQ9BT92 498 aa21.67■■□□□ 1.06
SREBF1-216ENST00000490796 MRPL4Q9BYD3 311 aaKnown RBP21.67■■□□□ 1.06
SREBF1-216ENST00000490796 KMT5AQ9NQR1 393 aa21.67■■□□□ 1.06
SREBF1-216ENST00000490796 TOPORSQ9NS56 1045 aaPredicted RBP21.67■■□□□ 1.06
SREBF1-216ENST00000490796 EPS15L1Q9UBC2 864 aa21.67■■□□□ 1.06
SREBF1-216ENST00000490796 TNFSF13BQ9Y275 285 aa21.67■■□□□ 1.06
SREBF1-216ENST00000490796 ZFHX2Q9C0A1 2572 aaPredicted RBP21.66■■□□□ 1.06
SREBF1-216ENST00000490796 TRAPPC3O43617 180 aa21.66■■□□□ 1.06
SREBF1-216ENST00000490796 N4BP1O75113 896 aaKnown RBP21.66■■□□□ 1.06
SREBF1-216ENST00000490796 HIP1RO75146 1068 aa21.66■■□□□ 1.06
SREBF1-216ENST00000490796 B3GAT3O94766 335 aa21.66■■□□□ 1.06
SREBF1-216ENST00000490796 EDN1P05305 212 aa21.66■■□□□ 1.06
SREBF1-216ENST00000490796 PRPHP41219 470 aa21.66■■□□□ 1.06
SREBF1-216ENST00000490796 TOB1P50616 345 aaPredicted RBP21.66■■□□□ 1.06
SREBF1-216ENST00000490796 ZNF568Q3ZCX4 644 aa21.66■■□□□ 1.06
SREBF1-216ENST00000490796 PPM1LQ5SGD2 360 aa21.66■■□□□ 1.06
SREBF1-216ENST00000490796 DCLRE1AQ6PJP8 1040 aa21.66■■□□□ 1.06
SREBF1-216ENST00000490796 PDZRN4Q6ZMN7 1036 aaPredicted RBP21.66■■□□□ 1.06
SREBF1-216ENST00000490796 LNX1Q8TBB1 728 aaPredicted RBP21.66■■□□□ 1.06
SREBF1-216ENST00000490796 UROC1Q96N76 676 aa21.66■■□□□ 1.06
SREBF1-216ENST00000490796 KIF2CQ99661 725 aa21.66■■□□□ 1.06
SREBF1-216ENST00000490796 CLSTN3Q9BQT9 956 aa21.66■■□□□ 1.06
SREBF1-216ENST00000490796 POLIQ9UNA4 740 aa21.66■■□□□ 1.06
SREBF1-216ENST00000490796 RBM19Q9Y4C8 960 aaKnown RBP21.66■■□□□ 1.06
SREBF1-216ENST00000490796 PP2D1A8MPX8 630 aa21.65■■□□□ 1.06
SREBF1-216ENST00000490796 H3BQV1 296 aa21.65■■□□□ 1.06
SREBF1-216ENST00000490796 XYLBO75191 536 aa21.65■■□□□ 1.06
SREBF1-216ENST00000490796 HNRNPA1P09651 372 aaKnown RBP eCLIP21.65■■□□□ 1.06
SREBF1-216ENST00000490796 NPTX2P47972 431 aa21.65■■□□□ 1.06
SREBF1-216ENST00000490796 RSAD2Q8WXG1 361 aa21.65■■□□□ 1.06
SREBF1-216ENST00000490796 RTP3Q9BQQ7 232 aa21.65■■□□□ 1.06
SREBF1-216ENST00000490796 CXCL16Q9H2A7 254 aa21.65■■□□□ 1.06
SREBF1-216ENST00000490796 FBXW11Q9UKB1 542 aa21.65■■□□□ 1.06
SREBF1-216ENST00000490796 MTCL1Q9Y4B5 1905 aaKnown RBP21.65■■□□□ 1.06
SREBF1-216ENST00000490796 NARSO43776 548 aaKnown RBP21.64■■□□□ 1.05
SREBF1-216ENST00000490796 C8AP07357 584 aa21.64■■□□□ 1.05
SREBF1-216ENST00000490796 CFHP08603 1231 aa21.64■■□□□ 1.05
SREBF1-216ENST00000490796 FSHRP23945 695 aa21.64■■□□□ 1.05
SREBF1-216ENST00000490796 CDC25AP30304 524 aa21.64■■□□□ 1.05
SREBF1-216ENST00000490796 OSTNP61366 133 aa21.64■■□□□ 1.05
SREBF1-216ENST00000490796 NAB2Q15742 525 aa21.64■■□□□ 1.05
SREBF1-216ENST00000490796 C8orf34Q49A92 452 aa21.64■■□□□ 1.05
SREBF1-216ENST00000490796 RILPL1Q5EBL4 403 aa21.64■■□□□ 1.05
SREBF1-216ENST00000490796 CDK5RAP3Q96JB5 506 aa21.64■■□□□ 1.05
SREBF1-216ENST00000490796 PPP1R10Q96QC0 940 aaKnown RBP21.64■■□□□ 1.05
SREBF1-216ENST00000490796 ACO2Q99798 780 aaKnown RBP21.64■■□□□ 1.05
SREBF1-216ENST00000490796 TMEM134Q9H6X4 195 aa21.64■■□□□ 1.05
SREBF1-216ENST00000490796 C17orf75Q9HAS0 396 aa21.64■■□□□ 1.05
SREBF1-216ENST00000490796 UPF2Q9HAU5 1272 aaKnown RBP21.64■■□□□ 1.05
SREBF1-216ENST00000490796 KCNG1Q9UIX4 513 aa21.64■■□□□ 1.05
SREBF1-216ENST00000490796 TMEM189-UBE2V1I3L0A0 370 aa21.63■■□□□ 1.05
SREBF1-216ENST00000490796 GFRA3O60609 400 aa21.63■■□□□ 1.05
SREBF1-216ENST00000490796 LAMP2P13473 410 aa21.63■■□□□ 1.05
SREBF1-216ENST00000490796 GRM5P41594 1212 aa21.63■■□□□ 1.05
SREBF1-216ENST00000490796 CLCNKBP51801 687 aa21.63■■□□□ 1.05
SREBF1-216ENST00000490796 STRN3Q13033 797 aa21.63■■□□□ 1.05
SREBF1-216ENST00000490796 GRASPQ7Z6J2 395 aaPredicted RBP21.63■■□□□ 1.05
SREBF1-216ENST00000490796 SLC44A3Q8N4M1 653 aa21.63■■□□□ 1.05
SREBF1-216ENST00000490796 RUSC1Q9BVN2 902 aa21.63■■□□□ 1.05
SREBF1-216ENST00000490796 TIPINQ9BVW5 301 aa21.63■■□□□ 1.05
SREBF1-216ENST00000490796 CDT1Q9H211 546 aa21.63■■□□□ 1.05
SREBF1-216ENST00000490796 EIF4ENIF1Q9NRA8 985 aaKnown RBP21.63■■□□□ 1.05
SREBF1-216ENST00000490796 SLC38A7Q9NVC3 462 aa21.63■■□□□ 1.05
SREBF1-216ENST00000490796 WNT16Q9UBV4 365 aa21.63■■□□□ 1.05
SREBF1-216ENST00000490796 ZFP37Q9Y6Q3 630 aaPredicted RBP21.63■■□□□ 1.05
SREBF1-216ENST00000490796 PTPRZ1P23471 2315 aaPredicted RBP21.63■■□□□ 1.05
SREBF1-216ENST00000490796 PAPLNO95428 1278 aa21.62■■□□□ 1.05
SREBF1-216ENST00000490796 HARSP12081 509 aaKnown RBP21.62■■□□□ 1.05
SREBF1-216ENST00000490796 AOC1P19801 751 aa21.62■■□□□ 1.05
SREBF1-216ENST00000490796 OR1D2P34982 312 aa21.62■■□□□ 1.05
SREBF1-216ENST00000490796 SMTNP53814 917 aa21.62■■□□□ 1.05
SREBF1-216ENST00000490796 RINT1Q6NUQ1 792 aa21.62■■□□□ 1.05
SREBF1-216ENST00000490796 DDX27Q96GQ7 796 aaKnown RBP21.62■■□□□ 1.05
SREBF1-216ENST00000490796 ACAP3Q96P50 834 aa21.62■■□□□ 1.05
SREBF1-216ENST00000490796 TARS2Q9BW92 718 aaKnown RBP21.62■■□□□ 1.05
SREBF1-216ENST00000490796 SMIM28A0A1B0GU29 152 aa21.61■■□□□ 1.05
SREBF1-216ENST00000490796 SLC16A4O15374 487 aa21.61■■□□□ 1.05
SREBF1-216ENST00000490796 CCL16O15467 120 aa21.61■■□□□ 1.05
SREBF1-216ENST00000490796 MCF2P10911 925 aa21.61■■□□□ 1.05
SREBF1-216ENST00000490796 SRFP11831 508 aa21.61■■□□□ 1.05
SREBF1-216ENST00000490796 FGFR3P22607 806 aa21.61■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms