RNA–Protein interactions for RNA: ENST00000490751.1

LDB1-204, Transcript of LIM domain binding 1, humanhuman

TSL 2

Gene LDB1, Length 762 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-204ENST00000490751 ATAT1Q5SQI0 421 aa34.39■■■■□ 3.1
LDB1-204ENST00000490751 MPZL3Q6UWV2 235 aa34.39■■■■□ 3.1
LDB1-204ENST00000490751 GPR65Q8IYL9 337 aa34.39■■■■□ 3.1
LDB1-204ENST00000490751 FEZF2Q8TBJ5 459 aa34.39■■■■□ 3.1
LDB1-204ENST00000490751 MAN1C1Q9NR34 630 aa34.39■■■■□ 3.1
LDB1-204ENST00000490751 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP34.39■■■■□ 3.1
LDB1-204ENST00000490751 TOPORSQ9NS56 1045 aaPredicted RBP34.39■■■■□ 3.1
LDB1-204ENST00000490751 ODF2LQ9ULJ1 636 aa34.39■■■■□ 3.1
LDB1-204ENST00000490751 MTMR6Q9Y217 621 aa34.39■■■■□ 3.1
LDB1-204ENST00000490751 NR2E1Q9Y466 385 aa34.39■■■■□ 3.1
LDB1-204ENST00000490751 DENND4AQ7Z401 1863 aa34.38■■■■□ 3.09
LDB1-204ENST00000490751 GLUD1P00367 558 aa34.38■■■■□ 3.09
LDB1-204ENST00000490751 HARSP12081 509 aaKnown RBP34.38■■■■□ 3.09
LDB1-204ENST00000490751 MARCKSP29966 332 aaPredicted RBP34.38■■■■□ 3.09
LDB1-204ENST00000490751 MCM6Q14566 821 aa34.38■■■■□ 3.09
LDB1-204ENST00000490751 RAD54LQ92698 747 aa34.38■■■■□ 3.09
LDB1-204ENST00000490751 CCSER1Q9C0I3 900 aa34.38■■■■□ 3.09
LDB1-204ENST00000490751 CITO14578 2027 aa34.38■■■■□ 3.09
LDB1-204ENST00000490751 C2orf16Q68DN1 1984 aa34.38■■■■□ 3.09
LDB1-204ENST00000490751 GPR149Q86SP6 731 aa34.37■■■■□ 3.09
LDB1-204ENST00000490751 ZBTB45Q96K62 511 aaPredicted RBP34.37■■■■□ 3.09
LDB1-204ENST00000490751 ANKFY1Q9P2R3 1169 aa34.37■■■■□ 3.09
LDB1-204ENST00000490751 FBXO2Q9UK22 296 aaPredicted RBP34.37■■■■□ 3.09
LDB1-204ENST00000490751 BRD1O95696 1058 aa34.36■■■■□ 3.09
LDB1-204ENST00000490751 NCKAP1LP55160 1127 aa34.36■■■■□ 3.09
LDB1-204ENST00000490751 CEBPZQ03701 1054 aaKnown RBP34.36■■■■□ 3.09
LDB1-204ENST00000490751 SPECC1Q5M775 1068 aa34.36■■■■□ 3.09
LDB1-204ENST00000490751 RTP2Q5QGT7 225 aa34.36■■■■□ 3.09
LDB1-204ENST00000490751 FAM171A1Q5VUB5 890 aa34.36■■■■□ 3.09
LDB1-204ENST00000490751 USP49Q70CQ1 688 aa34.36■■■■□ 3.09
LDB1-204ENST00000490751 EDAQ92838 391 aa34.36■■■■□ 3.09
LDB1-204ENST00000490751 EPSTI1Q96J88 318 aa34.36■■■■□ 3.09
LDB1-204ENST00000490751 FNIP2Q9P278 1114 aa34.36■■■■□ 3.09
LDB1-204ENST00000490751 SMIM28A0A1B0GU29 152 aa34.35■■■■□ 3.09
LDB1-204ENST00000490751 H0YCG3 227 aa34.35■■■■□ 3.09
LDB1-204ENST00000490751 TOM1L1O75674 476 aa34.35■■■■□ 3.09
LDB1-204ENST00000490751 XKR4Q5GH76 650 aa34.35■■■■□ 3.09
LDB1-204ENST00000490751 PRSS55Q6UWB4 352 aaPredicted RBP34.35■■■■□ 3.09
LDB1-204ENST00000490751 ZPBP2Q6X784 338 aa34.35■■■■□ 3.09
LDB1-204ENST00000490751 GLYCTKQ8IVS8 523 aa34.35■■■■□ 3.09
LDB1-204ENST00000490751 LARP4BQ92615 738 aaKnown RBP34.35■■■■□ 3.09
LDB1-204ENST00000490751 ACAP3Q96P50 834 aa34.35■■■■□ 3.09
LDB1-204ENST00000490751 TTPALQ9BTX7 342 aa34.35■■■■□ 3.09
LDB1-204ENST00000490751 VWA8A3KMH1 1905 aa34.34■■■■□ 3.09
LDB1-204ENST00000490751 MTCL1Q9Y4B5 1905 aaKnown RBP34.34■■■■□ 3.09
LDB1-204ENST00000490751 C2CD4DB7Z1M9 353 aa34.34■■■■□ 3.09
LDB1-204ENST00000490751 STX6O43752 255 aa34.34■■■■□ 3.09
LDB1-204ENST00000490751 FAM13AO94988 1023 aa34.34■■■■□ 3.09
LDB1-204ENST00000490751 KRT18P05783 430 aaKnown RBP34.34■■■■□ 3.09
LDB1-204ENST00000490751 MYBP10242 640 aa34.34■■■■□ 3.09
LDB1-204ENST00000490751 RPL17P18621 184 aaKnown RBP34.34■■■■□ 3.09
LDB1-204ENST00000490751 CREMQ03060 361 aa34.34■■■■□ 3.09
LDB1-204ENST00000490751 NOLC1Q14978 699 aaKnown RBP eCLIP34.34■■■■□ 3.09
LDB1-204ENST00000490751 ELMSAN1Q6PJG2 1045 aa34.34■■■■□ 3.09
LDB1-204ENST00000490751 ALKAL1Q6UXT8 129 aa34.34■■■■□ 3.09
LDB1-204ENST00000490751 HAUS6Q7Z4H7 955 aa34.34■■■■□ 3.09
LDB1-204ENST00000490751 PALB2Q86YC2 1186 aa34.34■■■■□ 3.09
LDB1-204ENST00000490751 SNX27Q96L92 541 aa34.34■■■■□ 3.09
LDB1-204ENST00000490751 GOLGA2P5Q9HBQ8 144 aa34.34■■■■□ 3.09
LDB1-204ENST00000490751 DPP7Q9UHL4 492 aa34.34■■■■□ 3.09
LDB1-204ENST00000490751 SRPRBQ9Y5M8 271 aaKnown RBP34.34■■■■□ 3.09
LDB1-204ENST00000490751 TMEM189-UBE2V1I3L0A0 370 aa34.33■■■■□ 3.09
LDB1-204ENST00000490751 CLCNKBP51801 687 aa34.33■■■■□ 3.09
LDB1-204ENST00000490751 ELAVL2Q12926 359 aaKnown RBP34.33■■■■□ 3.09
LDB1-204ENST00000490751 CEP57Q86XR8 500 aa34.33■■■■□ 3.09
LDB1-204ENST00000490751 MYCT1Q8N699 235 aa34.33■■■■□ 3.09
LDB1-204ENST00000490751 SNX21Q969T3 373 aa34.33■■■■□ 3.09
LDB1-204ENST00000490751 UROC1Q96N76 676 aa34.33■■■■□ 3.09
LDB1-204ENST00000490751 MYH15Q9Y2K3 1946 aa34.32■■■■□ 3.08
LDB1-204ENST00000490751 B3GAT3O94766 335 aa34.32■■■■□ 3.08
LDB1-204ENST00000490751 SPATA31D3P0C874 917 aa34.32■■■■□ 3.08
LDB1-204ENST00000490751 ZNF131P52739 623 aa34.32■■■■□ 3.08
LDB1-204ENST00000490751 ZXDAP98168 799 aa34.32■■■■□ 3.08
LDB1-204ENST00000490751 C15orf39Q6ZRI6 1047 aa34.32■■■■□ 3.08
LDB1-204ENST00000490751 SPATA31D4Q6ZUB0 917 aa34.32■■■■□ 3.08
LDB1-204ENST00000490751 CMASQ8NFW8 434 aaPredicted RBP34.32■■■■□ 3.08
LDB1-204ENST00000490751 PIK3R5Q8WYR1 880 aa34.32■■■■□ 3.08
LDB1-204ENST00000490751 BICD1Q96G01 975 aa34.32■■■■□ 3.08
LDB1-204ENST00000490751 CLIC6Q96NY7 704 aa34.32■■■■□ 3.08
LDB1-204ENST00000490751 USP28Q96RU2 1077 aa34.32■■■■□ 3.08
LDB1-204ENST00000490751 ZSCAN16Q9H4T2 348 aaPredicted RBP34.32■■■■□ 3.08
LDB1-204ENST00000490751 PARVGQ9HBI0 331 aa34.32■■■■□ 3.08
LDB1-204ENST00000490751 HCN4Q9Y3Q4 1203 aa34.32■■■■□ 3.08
LDB1-204ENST00000490751 PDCD11Q14690 1871 aaKnown RBP34.31■■■■□ 3.08
LDB1-204ENST00000490751 TECTAO75443 2155 aa34.31■■■■□ 3.08
LDB1-204ENST00000490751 TGM5O43548 720 aa34.31■■■■□ 3.08
LDB1-204ENST00000490751 IGFBP6P24592 240 aaPredicted RBP34.31■■■■□ 3.08
LDB1-204ENST00000490751 SOX4Q06945 474 aaPredicted RBP34.31■■■■□ 3.08
LDB1-204ENST00000490751 PTPN21Q16825 1174 aa34.31■■■■□ 3.08
LDB1-204ENST00000490751 DCLRE1AQ6PJP8 1040 aa34.31■■■■□ 3.08
LDB1-204ENST00000490751 TDRD5Q8NAT2 981 aaKnown RBP34.31■■■■□ 3.08
LDB1-204ENST00000490751 KCNN1Q92952 543 aa34.31■■■■□ 3.08
LDB1-204ENST00000490751 ZMAT2Q96NC0 199 aaKnown RBP34.31■■■■□ 3.08
LDB1-204ENST00000490751 ZHX3Q9H4I2 956 aa34.31■■■■□ 3.08
LDB1-204ENST00000490751 SLC38A7Q9NVC3 462 aa34.31■■■■□ 3.08
LDB1-204ENST00000490751 CCDC39Q9UFE4 941 aa34.31■■■■□ 3.08
LDB1-204ENST00000490751 K7ENM7 598 aa34.3■■■■□ 3.08
LDB1-204ENST00000490751 CLDN3O15551 220 aa34.3■■■■□ 3.08
LDB1-204ENST00000490751 TBCAO75347 108 aaKnown RBP34.3■■■■□ 3.08
LDB1-204ENST00000490751 C1RP00736 705 aa34.3■■■■□ 3.08
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms