RNA–Protein interactions for RNA: ENST00000490653.1

PRPF4B-208, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 2

Gene PRPF4B, Length 581 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-208ENST00000490653 S1PR5Q9H228 398 aa8.13□□□□□ -1.11
PRPF4B-208ENST00000490653 FOXP1Q9H334 677 aaPredicted RBP8.13□□□□□ -1.11
PRPF4B-208ENST00000490653 AGPAT5Q9NUQ2 364 aa8.13□□□□□ -1.11
PRPF4B-208ENST00000490653 TBC1D13Q9NVG8 400 aa8.13□□□□□ -1.11
PRPF4B-208ENST00000490653 FAM86C1Q9NVL1 165 aa8.13□□□□□ -1.11
PRPF4B-208ENST00000490653 DACT1Q9NYF0 836 aa8.13□□□□□ -1.11
PRPF4B-208ENST00000490653 SPG21Q9NZD8 308 aa8.13□□□□□ -1.11
PRPF4B-208ENST00000490653 CACNG4Q9UBN1 327 aa8.13□□□□□ -1.11
PRPF4B-208ENST00000490653 FKBPLQ9UIM3 349 aa8.13□□□□□ -1.11
PRPF4B-208ENST00000490653 CD207Q9UJ71 328 aa8.13□□□□□ -1.11
PRPF4B-208ENST00000490653 ARID2Q68CP9 1835 aa8.13□□□□□ -1.11
PRPF4B-208ENST00000490653 CACNA1HO95180 2353 aa8.12□□□□□ -1.11
PRPF4B-208ENST00000490653 C2orf71A6NGG8 1288 aa8.12□□□□□ -1.11
PRPF4B-208ENST00000490653 INO80B-WBP1J3KQ70 363 aa8.12□□□□□ -1.11
PRPF4B-208ENST00000490653 CLASP2O75122 1294 aaKnown RBP8.12□□□□□ -1.11
PRPF4B-208ENST00000490653 ZC3H11AO75152 810 aaKnown RBP eCLIP8.12□□□□□ -1.11
PRPF4B-208ENST00000490653 EYA4O95677 639 aa8.12□□□□□ -1.11
PRPF4B-208ENST00000490653 PDGFBP01127 241 aaPredicted RBP8.12□□□□□ -1.11
PRPF4B-208ENST00000490653 POMCP01189 267 aa8.12□□□□□ -1.11
PRPF4B-208ENST00000490653 WEE2P0C1S8 567 aa8.12□□□□□ -1.11
PRPF4B-208ENST00000490653 OR52Z1P0C646 297 aa8.12□□□□□ -1.11
PRPF4B-208ENST00000490653 MYBP10242 640 aa8.12□□□□□ -1.11
PRPF4B-208ENST00000490653 XRCC6P12956 609 aaKnown RBP eCLIP8.12□□□□□ -1.11
PRPF4B-208ENST00000490653 ARF4P18085 180 aaPredicted RBP8.12□□□□□ -1.11
PRPF4B-208ENST00000490653 AKAP5P24588 427 aa8.12□□□□□ -1.11
PRPF4B-208ENST00000490653 IGFBP6P24592 240 aaPredicted RBP8.12□□□□□ -1.11
PRPF4B-208ENST00000490653 UBE3AQ05086 875 aa8.12□□□□□ -1.11
PRPF4B-208ENST00000490653 CBX2Q14781 532 aaPredicted RBP8.12□□□□□ -1.11
PRPF4B-208ENST00000490653 TMC7Q7Z402 723 aa8.12□□□□□ -1.11
PRPF4B-208ENST00000490653 LRRC43Q8N309 656 aa8.12□□□□□ -1.11
PRPF4B-208ENST00000490653 C12orf76Q8N812 135 aaPredicted RBP8.12□□□□□ -1.11
PRPF4B-208ENST00000490653 TCP11Q8WWU5 503 aa8.12□□□□□ -1.11
PRPF4B-208ENST00000490653 GAD1Q99259 594 aa8.12□□□□□ -1.11
PRPF4B-208ENST00000490653 POLR3CQ9BUI4 534 aaPredicted RBP8.12□□□□□ -1.11
PRPF4B-208ENST00000490653 APOL6Q9BWW8 343 aa8.12□□□□□ -1.11
PRPF4B-208ENST00000490653 KCNH6Q9H252 994 aa8.12□□□□□ -1.11
PRPF4B-208ENST00000490653 ENTPD7Q9NQZ7 604 aa8.12□□□□□ -1.11
PRPF4B-208ENST00000490653 SH2B1Q9NRF2 756 aaPredicted RBP8.12□□□□□ -1.11
PRPF4B-208ENST00000490653 KLK14Q9P0G3 267 aa8.12□□□□□ -1.11
PRPF4B-208ENST00000490653 USP15Q9Y4E8 981 aaPredicted RBP8.12□□□□□ -1.11
PRPF4B-208ENST00000490653 IPPQ9Y573 584 aa8.12□□□□□ -1.11
PRPF4B-208ENST00000490653 DNMT3AQ9Y6K1 912 aaPredicted RBP8.12□□□□□ -1.11
PRPF4B-208ENST00000490653 VPS13AQ96RL7 3174 aa8.12□□□□□ -1.11
PRPF4B-208ENST00000490653 ZDBF2Q9HCK1 2354 aa8.11□□□□□ -1.11
PRPF4B-208ENST00000490653 CDC14CA4D256 554 aa8.11□□□□□ -1.11
PRPF4B-208ENST00000490653 TMEM221A6NGB7 291 aa8.11□□□□□ -1.11
PRPF4B-208ENST00000490653 E9PMD0 336 aa8.11□□□□□ -1.11
PRPF4B-208ENST00000490653 M0R296 226 aa8.11□□□□□ -1.11
PRPF4B-208ENST00000490653 NRP1O14786 923 aa8.11□□□□□ -1.11
PRPF4B-208ENST00000490653 NCK2O43639 380 aa8.11□□□□□ -1.11
PRPF4B-208ENST00000490653 NPTXRO95502 500 aa8.11□□□□□ -1.11
PRPF4B-208ENST00000490653 SSBP05455 408 aaKnown RBP eCLIP8.11□□□□□ -1.11
PRPF4B-208ENST00000490653 NCLP19338 710 aaKnown RBP8.11□□□□□ -1.11
PRPF4B-208ENST00000490653 U2AF2P26368 475 aaKnown RBP eCLIP8.11□□□□□ -1.116e-42■□□□□ 9.6
PRPF4B-208ENST00000490653 GJB2P29033 226 aa8.11□□□□□ -1.11
PRPF4B-208ENST00000490653 CA8P35219 290 aa8.11□□□□□ -1.11
PRPF4B-208ENST00000490653 HMGN5P82970 282 aaKnown RBP8.11□□□□□ -1.11
PRPF4B-208ENST00000490653 RELBQ01201 579 aa8.11□□□□□ -1.11
PRPF4B-208ENST00000490653 COASYQ13057 564 aa8.11□□□□□ -1.11
PRPF4B-208ENST00000490653 SMAD4Q13485 552 aaKnown RBP8.11□□□□□ -1.11
PRPF4B-208ENST00000490653 ANKRD54Q6NXT1 300 aa8.11□□□□□ -1.11
PRPF4B-208ENST00000490653 FAM43BQ6ZT52 329 aaPredicted RBP8.11□□□□□ -1.11
PRPF4B-208ENST00000490653 KCNK18Q7Z418 384 aa8.11□□□□□ -1.11
PRPF4B-208ENST00000490653 NOSTRINQ8IVI9 506 aa8.11□□□□□ -1.11
PRPF4B-208ENST00000490653 VPS52Q8N1B4 723 aa8.11□□□□□ -1.11
PRPF4B-208ENST00000490653 MRPL43Q8N983 215 aaKnown RBP8.11□□□□□ -1.11
PRPF4B-208ENST00000490653 SMRP1Q8NCR6 262 aa8.11□□□□□ -1.11
PRPF4B-208ENST00000490653 GSTCDQ8NEC7 633 aa8.11□□□□□ -1.11
PRPF4B-208ENST00000490653 RNF217Q8TC41 542 aa8.11□□□□□ -1.11
PRPF4B-208ENST00000490653 IGSF21Q96ID5 467 aa8.11□□□□□ -1.11
PRPF4B-208ENST00000490653 NACC1Q96RE7 527 aa8.11□□□□□ -1.11
PRPF4B-208ENST00000490653 INSM2Q96T92 566 aaPredicted RBP8.11□□□□□ -1.11
PRPF4B-208ENST00000490653 PLIN2Q99541 437 aa8.11□□□□□ -1.11
PRPF4B-208ENST00000490653 MMTAG2Q9BU76 263 aaKnown RBP8.11□□□□□ -1.11
PRPF4B-208ENST00000490653 KIFC3Q9BVG8 833 aa8.11□□□□□ -1.11
PRPF4B-208ENST00000490653 ZBP1Q9H171 429 aa8.11□□□□□ -1.11
PRPF4B-208ENST00000490653 RSAD1Q9HA92 442 aa8.11□□□□□ -1.11
PRPF4B-208ENST00000490653 TUFT1Q9NNX1 390 aa8.11□□□□□ -1.11
PRPF4B-208ENST00000490653 PUF60Q9UHX1 559 aaKnown RBP8.11□□□□□ -1.11
PRPF4B-208ENST00000490653 KIAA1024Q9UPX6 916 aa8.11□□□□□ -1.11
PRPF4B-208ENST00000490653 LZTS1Q9Y250 596 aa8.11□□□□□ -1.11
PRPF4B-208ENST00000490653 PPME1Q9Y570 386 aa8.11□□□□□ -1.11
PRPF4B-208ENST00000490653 LRRIQ4A6NIV6 560 aa8.1□□□□□ -1.11
PRPF4B-208ENST00000490653 SFI1A8K8P3 1242 aa8.1□□□□□ -1.11
PRPF4B-208ENST00000490653 EIF5BO60841 1220 aaKnown RBP8.1□□□□□ -1.11
PRPF4B-208ENST00000490653 ALDH2P05091 517 aa8.1□□□□□ -1.11
PRPF4B-208ENST00000490653 SKIP12755 728 aa8.1□□□□□ -1.11
PRPF4B-208ENST00000490653 ITGA4P13612 1032 aa8.1□□□□□ -1.11
PRPF4B-208ENST00000490653 EPCAMP16422 314 aa8.1□□□□□ -1.11
PRPF4B-208ENST00000490653 LIG1P18858 919 aa8.1□□□□□ -1.11
PRPF4B-208ENST00000490653 CYP11B2P19099 503 aa8.1□□□□□ -1.11
PRPF4B-208ENST00000490653 SP100P23497 879 aaPredicted RBP8.1□□□□□ -1.11
PRPF4B-208ENST00000490653 RPA1P27694 616 aa8.1□□□□□ -1.11
PRPF4B-208ENST00000490653 CCT6AP40227 531 aaKnown RBP8.1□□□□□ -1.11
PRPF4B-208ENST00000490653 ALDH7A1P49419 539 aaKnown RBP8.1□□□□□ -1.11
PRPF4B-208ENST00000490653 SCNN1GP51170 649 aa8.1□□□□□ -1.11
PRPF4B-208ENST00000490653 ZXDAP98168 799 aa8.1□□□□□ -1.11
PRPF4B-208ENST00000490653 KRT17Q04695 432 aa8.1□□□□□ -1.11
PRPF4B-208ENST00000490653 RNASELQ05823 741 aaKnown RBP8.1□□□□□ -1.11
PRPF4B-208ENST00000490653 POU5F1BQ06416 359 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms