RNA–Protein interactions for RNA: ENST00000490504.5

PCCB-218, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

TSL 3 BASIC

Gene PCCB, Length 1,613 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-218ENST00000490504 BRWD1Q9NSI6 2320 aa17.09■□□□□ 0.33
PCCB-218ENST00000490504 ASAP2O43150 1006 aa17.09■□□□□ 0.33
PCCB-218ENST00000490504 NRDCO43847 1150 aa17.09■□□□□ 0.33
PCCB-218ENST00000490504 FGF18O76093 207 aa17.09■□□□□ 0.33
PCCB-218ENST00000490504 ZNF131P52739 623 aa17.09■□□□□ 0.33
PCCB-218ENST00000490504 CCZ1BP86790 482 aa17.09■□□□□ 0.33
PCCB-218ENST00000490504 CCZ1P86791 482 aaPredicted RBP17.09■□□□□ 0.33
PCCB-218ENST00000490504 PTPN21Q16825 1174 aa17.09■□□□□ 0.33
PCCB-218ENST00000490504 PPP4R3CPQ6ZMV5 832 aa17.09■□□□□ 0.33
PCCB-218ENST00000490504 EPM2AIP1Q7L775 607 aaPredicted RBP17.09■□□□□ 0.33
PCCB-218ENST00000490504 THNSL1Q8IYQ7 743 aa17.09■□□□□ 0.33
PCCB-218ENST00000490504 ASAP3Q8TDY4 903 aa17.09■□□□□ 0.33
PCCB-218ENST00000490504 LPPQ93052 612 aa17.09■□□□□ 0.33
PCCB-218ENST00000490504 IGFLR1Q9H665 355 aa17.09■□□□□ 0.33
PCCB-218ENST00000490504 MRPL44Q9H9J2 332 aaKnown RBP17.09■□□□□ 0.33
PCCB-218ENST00000490504 LGALS16A8MUM7 142 aa17.08■□□□□ 0.32
PCCB-218ENST00000490504 DGAT1O75907 488 aa17.08■□□□□ 0.32
PCCB-218ENST00000490504 LAG3P18627 525 aa17.08■□□□□ 0.32
PCCB-218ENST00000490504 HOXA11P31270 313 aaPredicted RBP17.08■□□□□ 0.32
PCCB-218ENST00000490504 ARL2P36404 184 aa17.08■□□□□ 0.32
PCCB-218ENST00000490504 LTBRP36941 435 aa17.08■□□□□ 0.32
PCCB-218ENST00000490504 PBX3P40426 434 aa17.08■□□□□ 0.32
PCCB-218ENST00000490504 BMT2Q1RMZ1 405 aa17.08■□□□□ 0.32
PCCB-218ENST00000490504 CTC1Q2NKJ3 1217 aa17.08■□□□□ 0.32
PCCB-218ENST00000490504 PADI6Q6TGC4 694 aa17.08■□□□□ 0.32
PCCB-218ENST00000490504 ADGRD2Q7Z7M1 963 aa17.08■□□□□ 0.32
PCCB-218ENST00000490504 LRRC43Q8N309 656 aa17.08■□□□□ 0.32
PCCB-218ENST00000490504 CCDC43Q96MW1 224 aaKnown RBP17.08■□□□□ 0.32
PCCB-218ENST00000490504 TUBGCP2Q9BSJ2 902 aa17.08■□□□□ 0.32
PCCB-218ENST00000490504 KCTD10Q9H3F6 313 aa17.08■□□□□ 0.32
PCCB-218ENST00000490504 AGPAT5Q9NUQ2 364 aa17.08■□□□□ 0.32
PCCB-218ENST00000490504 FAM105AQ9NUU6 356 aa17.08■□□□□ 0.32
PCCB-218ENST00000490504 RALGAPA2Q2PPJ7 1873 aa17.08■□□□□ 0.32
PCCB-218ENST00000490504 NLRC5Q86WI3 1866 aa17.08■□□□□ 0.32
PCCB-218ENST00000490504 MEIS3P2A8K0S8 358 aa17.07■□□□□ 0.32
PCCB-218ENST00000490504 EIF3DO15371 548 aaKnown RBP eCLIP17.07■□□□□ 0.32
PCCB-218ENST00000490504 SKILP12757 684 aa17.07■□□□□ 0.32
PCCB-218ENST00000490504 PRKCSHP14314 528 aaPredicted RBP17.07■□□□□ 0.32
PCCB-218ENST00000490504 MTIF2P46199 727 aaKnown RBP17.07■□□□□ 0.32
PCCB-218ENST00000490504 CASP5P51878 434 aa17.07■□□□□ 0.32
PCCB-218ENST00000490504 FKBP3Q00688 224 aaKnown RBP17.07■□□□□ 0.32
PCCB-218ENST00000490504 DLX2Q07687 328 aaPredicted RBP17.07■□□□□ 0.32
PCCB-218ENST00000490504 MXD4Q14582 209 aaPredicted RBP17.07■□□□□ 0.32
PCCB-218ENST00000490504 KCNT2Q6UVM3 1135 aa17.07■□□□□ 0.32
PCCB-218ENST00000490504 NELFCDQ8IXH7 590 aa17.07■□□□□ 0.32
PCCB-218ENST00000490504 MYCT1Q8N699 235 aa17.07■□□□□ 0.32
PCCB-218ENST00000490504 CCDC112Q8NEF3 446 aa17.07■□□□□ 0.32
PCCB-218ENST00000490504 TIPINQ9BVW5 301 aa17.07■□□□□ 0.32
PCCB-218ENST00000490504 UBE4BO95155 1302 aa17.07■□□□□ 0.32
PCCB-218ENST00000490504 LINC01565O15544 149 aa17.07■□□□□ 0.32
PCCB-218ENST00000490504 NCK2O43639 380 aa17.07■□□□□ 0.32
PCCB-218ENST00000490504 USO1O60763 962 aaKnown RBP17.07■□□□□ 0.32
PCCB-218ENST00000490504 ZNF623O75123 536 aa17.07■□□□□ 0.32
PCCB-218ENST00000490504 MYBP10242 640 aa17.07■□□□□ 0.32
PCCB-218ENST00000490504 GLRA2P23416 452 aa17.07■□□□□ 0.32
PCCB-218ENST00000490504 PTENP60484 403 aa17.07■□□□□ 0.32
PCCB-218ENST00000490504 ERVFC1P60507 584 aa17.07■□□□□ 0.32
PCCB-218ENST00000490504 UBXN1Q04323 297 aa17.07■□□□□ 0.32
PCCB-218ENST00000490504 UBE3AQ05086 875 aa17.07■□□□□ 0.32
PCCB-218ENST00000490504 EDRF1Q3B7T1 1238 aa17.07■□□□□ 0.32
PCCB-218ENST00000490504 UBXN11Q5T124 520 aa17.07■□□□□ 0.32
PCCB-218ENST00000490504 MICAL1Q8TDZ2 1067 aa17.07■□□□□ 0.32
PCCB-218ENST00000490504 CEP63Q96MT8 703 aa17.07■□□□□ 0.32
PCCB-218ENST00000490504 SPTLC3Q9NUV7 552 aa17.07■□□□□ 0.32
PCCB-218ENST00000490504 PCDHB2Q9Y5E7 798 aa17.07■□□□□ 0.32
PCCB-218ENST00000490504 A0A1W2PQC6 194 aa17.06■□□□□ 0.32
PCCB-218ENST00000490504 HIP1RO75146 1068 aa17.06■□□□□ 0.32
PCCB-218ENST00000490504 GCNT3O95395 438 aa17.06■□□□□ 0.32
PCCB-218ENST00000490504 SKIP12755 728 aa17.06■□□□□ 0.32
PCCB-218ENST00000490504 IL9P15248 144 aa17.06■□□□□ 0.32
PCCB-218ENST00000490504 ADAM15Q13444 863 aa17.06■□□□□ 0.32
PCCB-218ENST00000490504 CAPSQ13938 189 aa17.06■□□□□ 0.32
PCCB-218ENST00000490504 NOLC1Q14978 699 aaKnown RBP eCLIP17.06■□□□□ 0.32
PCCB-218ENST00000490504 KNOP1Q1ED39 458 aaKnown RBP17.06■□□□□ 0.32
PCCB-218ENST00000490504 PTCRAQ6ISU1 281 aaPredicted RBP17.06■□□□□ 0.32
PCCB-218ENST00000490504 MAEAQ7L5Y9 396 aa17.06■□□□□ 0.32
PCCB-218ENST00000490504 RBM23Q86U06 439 aaKnown RBP17.06■□□□□ 0.32
PCCB-218ENST00000490504 PPFIBP1Q86W92 1011 aa17.06■□□□□ 0.32
PCCB-218ENST00000490504 ZC3H3Q8IXZ2 948 aaKnown RBP17.06■□□□□ 0.32
PCCB-218ENST00000490504 ZNF507Q8TCN5 953 aa17.06■□□□□ 0.32
PCCB-218ENST00000490504 EEF2KMTQ96G04 330 aa17.06■□□□□ 0.32
PCCB-218ENST00000490504 ZNF558Q96NG5 402 aa17.06■□□□□ 0.32
PCCB-218ENST00000490504 POLR3FQ9H1D9 316 aaPredicted RBP17.06■□□□□ 0.32
PCCB-218ENST00000490504 GPRC5CQ9NQ84 441 aa17.06■□□□□ 0.32
PCCB-218ENST00000490504 TLR9Q9NR96 1032 aa17.06■□□□□ 0.32
PCCB-218ENST00000490504 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.06■□□□□ 0.32
PCCB-218ENST00000490504 BDP1A6H8Y1 2624 aa17.05■□□□□ 0.32
PCCB-218ENST00000490504 GRXCR2A6NFK2 248 aa17.05■□□□□ 0.32
PCCB-218ENST00000490504 SFI1A8K8P3 1242 aa17.05■□□□□ 0.32
PCCB-218ENST00000490504 PES1O00541 588 aaKnown RBP17.05■□□□□ 0.32
PCCB-218ENST00000490504 OFD1O75665 1012 aa17.05■□□□□ 0.32
PCCB-218ENST00000490504 GNA14O95837 355 aa17.05■□□□□ 0.32
PCCB-218ENST00000490504 TPM1P09493 284 aa17.05■□□□□ 0.32
PCCB-218ENST00000490504 NRIP1P48552 1158 aa17.05■□□□□ 0.32
PCCB-218ENST00000490504 RAB27AP51159 221 aa17.05■□□□□ 0.32
PCCB-218ENST00000490504 PLCB3Q01970 1234 aa17.05■□□□□ 0.32
PCCB-218ENST00000490504 MAPK7Q13164 816 aa17.05■□□□□ 0.32
PCCB-218ENST00000490504 TRIM14Q14142 442 aa17.05■□□□□ 0.32
PCCB-218ENST00000490504 TFDP1Q14186 410 aa17.05■□□□□ 0.32
PCCB-218ENST00000490504 STXBP4Q6ZWJ1 553 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms