RNA–Protein interactions for RNA: ENST00000490475.1

TTC28-207, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 5

Gene TTC28, Length 724 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-207ENST00000490475 GBP2P32456 591 aaPredicted RBP11.39□□□□□ -0.59
TTC28-207ENST00000490475 YARSP54577 528 aaKnown RBP11.39□□□□□ -0.59
TTC28-207ENST00000490475 VCPP55072 806 aaKnown RBP11.39□□□□□ -0.59
TTC28-207ENST00000490475 PKP1Q13835 747 aa11.39□□□□□ -0.59
TTC28-207ENST00000490475 LIN9Q5TKA1 542 aa11.39□□□□□ -0.59
TTC28-207ENST00000490475 KRT79Q5XKE5 535 aa11.39□□□□□ -0.59
TTC28-207ENST00000490475 POTEGQ6S5H5 508 aa11.39□□□□□ -0.59
TTC28-207ENST00000490475 RIN2Q8WYP3 895 aaPredicted RBP11.39□□□□□ -0.59
TTC28-207ENST00000490475 PIK3R5Q8WYR1 880 aa11.39□□□□□ -0.59
TTC28-207ENST00000490475 ATOH1Q92858 354 aaPredicted RBP11.39□□□□□ -0.59
TTC28-207ENST00000490475 DRC1Q96MC2 740 aa11.39□□□□□ -0.59
TTC28-207ENST00000490475 GPR62Q9BZJ7 368 aa11.39□□□□□ -0.59
TTC28-207ENST00000490475 PRKD2Q9BZL6 878 aa11.39□□□□□ -0.59
TTC28-207ENST00000490475 NT5C3AQ9H0P0 336 aa11.39□□□□□ -0.59
TTC28-207ENST00000490475 PDZD7Q9H5P4 517 aa11.39□□□□□ -0.59
TTC28-207ENST00000490475 GPRC5CQ9NQ84 441 aa11.39□□□□□ -0.59
TTC28-207ENST00000490475 WNT16Q9UBV4 365 aa11.39□□□□□ -0.59
TTC28-207ENST00000490475 CDH22Q9UJ99 828 aa11.39□□□□□ -0.59
TTC28-207ENST00000490475 DNM3Q9UQ16 869 aa11.39□□□□□ -0.59
TTC28-207ENST00000490475 PLXNA3P51805 1871 aa11.38□□□□□ -0.59
TTC28-207ENST00000490475 TMEM189-UBE2V1I3L0A0 370 aa11.38□□□□□ -0.59
TTC28-207ENST00000490475 TGM5O43548 720 aa11.38□□□□□ -0.59
TTC28-207ENST00000490475 XYLBO75191 536 aa11.38□□□□□ -0.59
TTC28-207ENST00000490475 ZMYND10O75800 440 aa11.38□□□□□ -0.59
TTC28-207ENST00000490475 RECQL4O94761 1208 aa11.38□□□□□ -0.59
TTC28-207ENST00000490475 RFX1P22670 979 aa11.38□□□□□ -0.59
TTC28-207ENST00000490475 GRIN1Q05586 938 aa11.38□□□□□ -0.59
TTC28-207ENST00000490475 DMP1Q13316 513 aaPredicted RBP11.38□□□□□ -0.59
TTC28-207ENST00000490475 UVSSAQ2YD98 709 aa11.38□□□□□ -0.59
TTC28-207ENST00000490475 LILRA6Q6PI73 481 aa11.38□□□□□ -0.59
TTC28-207ENST00000490475 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.38□□□□□ -0.59
TTC28-207ENST00000490475 TAS1R1Q7RTX1 841 aa11.38□□□□□ -0.59
TTC28-207ENST00000490475 DDX27Q96GQ7 796 aaKnown RBP11.38□□□□□ -0.59
TTC28-207ENST00000490475 MMTAG2Q9BU76 263 aaKnown RBP11.38□□□□□ -0.59
TTC28-207ENST00000490475 CCDC94Q9BW85 323 aaPredicted RBP11.38□□□□□ -0.59
TTC28-207ENST00000490475 CCDC113Q9H0I3 377 aa11.38□□□□□ -0.59
TTC28-207ENST00000490475 BHMT2Q9H2M3 363 aa11.38□□□□□ -0.59
TTC28-207ENST00000490475 ZSCAN16Q9H4T2 348 aaPredicted RBP11.38□□□□□ -0.59
TTC28-207ENST00000490475 SLC38A7Q9NVC3 462 aa11.38□□□□□ -0.59
TTC28-207ENST00000490475 KLK14Q9P0G3 267 aa11.38□□□□□ -0.59
TTC28-207ENST00000490475 TFIP11Q9UBB9 837 aaKnown RBP11.38□□□□□ -0.59
TTC28-207ENST00000490475 KIAA1024Q9UPX6 916 aa11.38□□□□□ -0.59
TTC28-207ENST00000490475 DOCK8Q8NF50 2099 aa11.37□□□□□ -0.59
TTC28-207ENST00000490475 PTPRZ1P23471 2315 aaPredicted RBP11.37□□□□□ -0.59
TTC28-207ENST00000490475 PROB1E7EW31 1015 aa11.37□□□□□ -0.59
TTC28-207ENST00000490475 POU2F2P09086 479 aa11.37□□□□□ -0.59
TTC28-207ENST00000490475 ZSCAN22P10073 491 aaPredicted RBP11.37□□□□□ -0.59
TTC28-207ENST00000490475 SRFP11831 508 aa11.37□□□□□ -0.59
TTC28-207ENST00000490475 AOC1P19801 751 aa11.37□□□□□ -0.59
TTC28-207ENST00000490475 SCP2P22307 547 aa11.37□□□□□ -0.59
TTC28-207ENST00000490475 MARCKSP29966 332 aaPredicted RBP11.37□□□□□ -0.59
TTC28-207ENST00000490475 PTPAQ15257 358 aa11.37□□□□□ -0.59
TTC28-207ENST00000490475 ZRSR1Q15695 479 aaKnown RBP11.37□□□□□ -0.59
TTC28-207ENST00000490475 PSMD5Q16401 504 aa11.37□□□□□ -0.59
TTC28-207ENST00000490475 FOXD4L6Q3SYB3 417 aaPredicted RBP11.37□□□□□ -0.59
TTC28-207ENST00000490475 ATF7IP2Q5U623 682 aa11.37□□□□□ -0.59
TTC28-207ENST00000490475 FAM171A1Q5VUB5 890 aa11.37□□□□□ -0.59
TTC28-207ENST00000490475 ARL6IP4Q66PJ3 421 aaKnown RBP11.37□□□□□ -0.59
TTC28-207ENST00000490475 KANK3Q6NY19 840 aa11.37□□□□□ -0.59
TTC28-207ENST00000490475 DCLRE1AQ6PJP8 1040 aa11.37□□□□□ -0.59
TTC28-207ENST00000490475 FOXD4L3Q6VB84 417 aaPredicted RBP11.37□□□□□ -0.59
TTC28-207ENST00000490475 ANKS3Q6ZW76 656 aa11.37□□□□□ -0.59
TTC28-207ENST00000490475 CDR2LQ86X02 465 aaPredicted RBP11.37□□□□□ -0.59
TTC28-207ENST00000490475 PALB2Q86YC2 1186 aa11.37□□□□□ -0.59
TTC28-207ENST00000490475 SNX29Q8TEQ0 813 aa11.37□□□□□ -0.59
TTC28-207ENST00000490475 USP28Q96RU2 1077 aa11.37□□□□□ -0.59
TTC28-207ENST00000490475 PLIN2Q99541 437 aa11.37□□□□□ -0.59
TTC28-207ENST00000490475 TMEM134Q9H6X4 195 aa11.37□□□□□ -0.59
TTC28-207ENST00000490475 POLD4Q9HCU8 107 aa11.37□□□□□ -0.59
TTC28-207ENST00000490475 DDX19AQ9NUU7 478 aaKnown RBP11.37□□□□□ -0.59
TTC28-207ENST00000490475 SNTG2Q9NY99 539 aa11.37□□□□□ -0.59
TTC28-207ENST00000490475 KCND2Q9NZV8 630 aa11.37□□□□□ -0.59
TTC28-207ENST00000490475 FBXW11Q9UKB1 542 aa11.37□□□□□ -0.59
TTC28-207ENST00000490475 TNFSF13BQ9Y275 285 aa11.37□□□□□ -0.59
TTC28-207ENST00000490475 E9PMD0 336 aa11.36□□□□□ -0.59
TTC28-207ENST00000490475 H0YCG3 227 aa11.36□□□□□ -0.59
TTC28-207ENST00000490475 PTGESO14684 152 aa11.36□□□□□ -0.59
TTC28-207ENST00000490475 GFRA3O60609 400 aa11.36□□□□□ -0.59
TTC28-207ENST00000490475 B3GAT3O94766 335 aa11.36□□□□□ -0.59
TTC28-207ENST00000490475 PDGFBP01127 241 aaPredicted RBP11.36□□□□□ -0.59
TTC28-207ENST00000490475 LAMP2P13473 410 aa11.36□□□□□ -0.59
TTC28-207ENST00000490475 LIG1P18858 919 aa11.36□□□□□ -0.59
TTC28-207ENST00000490475 SMTNP53814 917 aa11.36□□□□□ -0.59
TTC28-207ENST00000490475 PPM1LQ5SGD2 360 aa11.36□□□□□ -0.59
TTC28-207ENST00000490475 MTSS1LQ765P7 747 aa11.36□□□□□ -0.59
TTC28-207ENST00000490475 CEP57Q86XR8 500 aa11.36□□□□□ -0.59
TTC28-207ENST00000490475 FLCNQ8NFG4 579 aa11.36□□□□□ -0.59
TTC28-207ENST00000490475 ZNF707Q96C28 371 aaPredicted RBP11.36□□□□□ -0.59
TTC28-207ENST00000490475 SHDQ96IW2 340 aa11.36□□□□□ -0.59
TTC28-207ENST00000490475 MRPL4Q9BYD3 311 aaKnown RBP11.36□□□□□ -0.59
TTC28-207ENST00000490475 RIF1Q5UIP0 2472 aaKnown RBP11.36□□□□□ -0.59
TTC28-207ENST00000490475 CITO14578 2027 aa11.35□□□□□ -0.59
TTC28-207ENST00000490475 CASTOR2A6NHX0 329 aa11.35□□□□□ -0.59
TTC28-207ENST00000490475 CCDC169A6NNP5 214 aa11.35□□□□□ -0.59
TTC28-207ENST00000490475 H0Y858 1186 aa11.35□□□□□ -0.59
TTC28-207ENST00000490475 SLC26A4O43511 780 aa11.35□□□□□ -0.59
TTC28-207ENST00000490475 RFPL2O75678 378 aa11.35□□□□□ -0.59
TTC28-207ENST00000490475 KIF4AO95239 1232 aa11.35□□□□□ -0.59
TTC28-207ENST00000490475 BMP15O95972 392 aa11.35□□□□□ -0.59
TTC28-207ENST00000490475 F13A1P00488 732 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms