RNA–Protein interactions for RNA: ENST00000490283.1

SEC13-218, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 740 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-218ENST00000490283 ABCD1P33897 745 aa19.11■□□□□ 0.65
SEC13-218ENST00000490283 NOLC1Q14978 699 aaKnown RBP eCLIP19.11■□□□□ 0.659e-6■□□□□ 8.9
SEC13-218ENST00000490283 ARSHQ5FYA8 562 aa19.11■□□□□ 0.65
SEC13-218ENST00000490283 GLRA4Q5JXX5 417 aa19.11■□□□□ 0.65
SEC13-218ENST00000490283 KIAA0319Q5VV43 1072 aa19.11■□□□□ 0.65
SEC13-218ENST00000490283 FAM173BQ6P4H8 233 aa19.11■□□□□ 0.65
SEC13-218ENST00000490283 ZPBP2Q6X784 338 aa19.11■□□□□ 0.65
SEC13-218ENST00000490283 HASPINQ8TF76 798 aa19.11■□□□□ 0.65
SEC13-218ENST00000490283 RIN2Q8WYP3 895 aaPredicted RBP19.11■□□□□ 0.65
SEC13-218ENST00000490283 GPR62Q9BZJ7 368 aa19.11■□□□□ 0.65
SEC13-218ENST00000490283 RXFP1Q9HBX9 757 aa19.11■□□□□ 0.65
SEC13-218ENST00000490283 PTPRHQ9HD43 1115 aa19.11■□□□□ 0.65
SEC13-218ENST00000490283 TSHZ2Q9NRE2 1034 aa19.11■□□□□ 0.65
SEC13-218ENST00000490283 CHST7Q9NS84 486 aa19.11■□□□□ 0.65
SEC13-218ENST00000490283 BLOC1S4Q9NUP1 217 aa19.11■□□□□ 0.65
SEC13-218ENST00000490283 STK17AQ9UEE5 414 aa19.11■□□□□ 0.65
SEC13-218ENST00000490283 TDRD15B5MCY1 1934 aaKnown RBP19.1■□□□□ 0.65
SEC13-218ENST00000490283 K7ENM7 598 aa19.1■□□□□ 0.65
SEC13-218ENST00000490283 TEX28O15482 410 aa19.1■□□□□ 0.65
SEC13-218ENST00000490283 CLDN3O15551 220 aa19.1■□□□□ 0.65
SEC13-218ENST00000490283 KIF4AO95239 1232 aa19.1■□□□□ 0.65
SEC13-218ENST00000490283 EFEMP2O95967 443 aa19.1■□□□□ 0.65
SEC13-218ENST00000490283 COL9A1P20849 921 aa19.1■□□□□ 0.65
SEC13-218ENST00000490283 PROZP22891 400 aa19.1■□□□□ 0.65
SEC13-218ENST00000490283 DDIT3P35638 169 aa19.1■□□□□ 0.65
SEC13-218ENST00000490283 NCKAP1LP55160 1127 aa19.1■□□□□ 0.65
SEC13-218ENST00000490283 HERC4Q5GLZ8 1057 aaPredicted RBP19.1■□□□□ 0.65
SEC13-218ENST00000490283 PDXDC1Q6P996 788 aa19.1■□□□□ 0.65
SEC13-218ENST00000490283 HAUS6Q7Z4H7 955 aa19.1■□□□□ 0.65
SEC13-218ENST00000490283 CEP57Q86XR8 500 aa19.1■□□□□ 0.65
SEC13-218ENST00000490283 C12orf76Q8N812 135 aaPredicted RBP19.1■□□□□ 0.65
SEC13-218ENST00000490283 CEP120Q8N960 986 aa19.1■□□□□ 0.65
SEC13-218ENST00000490283 KRI1Q8N9T8 703 aaKnown RBP19.1■□□□□ 0.65
SEC13-218ENST00000490283 ZNF396Q96N95 335 aaPredicted RBP19.1■□□□□ 0.65
SEC13-218ENST00000490283 PAAF1Q9BRP4 392 aa19.1■□□□□ 0.65
SEC13-218ENST00000490283 TTPALQ9BTX7 342 aa19.1■□□□□ 0.65
SEC13-218ENST00000490283 CACNG4Q9UBN1 327 aa19.1■□□□□ 0.65
SEC13-218ENST00000490283 MUTYHQ9UIF7 546 aa19.1■□□□□ 0.65
SEC13-218ENST00000490283 FBXO2Q9UK22 296 aaPredicted RBP19.1■□□□□ 0.65
SEC13-218ENST00000490283 FAM86C2PA6NEL3 165 aa19.09■□□□□ 0.65
SEC13-218ENST00000490283 TRAPPC3O43617 180 aa19.09■□□□□ 0.65
SEC13-218ENST00000490283 TRAK2O60296 914 aa19.09■□□□□ 0.65
SEC13-218ENST00000490283 B3GAT3O94766 335 aa19.09■□□□□ 0.65
SEC13-218ENST00000490283 BRD1O95696 1058 aa19.09■□□□□ 0.65
SEC13-218ENST00000490283 LIG4P49917 911 aa19.09■□□□□ 0.65
SEC13-218ENST00000490283 STK38Q15208 465 aa19.09■□□□□ 0.65
SEC13-218ENST00000490283 SPECC1Q5M775 1068 aa19.09■□□□□ 0.65
SEC13-218ENST00000490283 FAM171A1Q5VUB5 890 aa19.09■□□□□ 0.65
SEC13-218ENST00000490283 RRAGBQ5VZM2 374 aa19.09■□□□□ 0.65
SEC13-218ENST00000490283 TMC5Q6UXY8 1006 aa19.09■□□□□ 0.65
SEC13-218ENST00000490283 EPSTI1Q96J88 318 aa19.09■□□□□ 0.65
SEC13-218ENST00000490283 B3GALT6Q96L58 329 aa19.09■□□□□ 0.65
SEC13-218ENST00000490283 SNX27Q96L92 541 aa19.09■□□□□ 0.65
SEC13-218ENST00000490283 PPP1R10Q96QC0 940 aaKnown RBP19.09■□□□□ 0.65
SEC13-218ENST00000490283 USP28Q96RU2 1077 aa19.09■□□□□ 0.65
SEC13-218ENST00000490283 LRFN3Q9BTN0 628 aa19.09■□□□□ 0.65
SEC13-218ENST00000490283 MAN1C1Q9NR34 630 aa19.09■□□□□ 0.65
SEC13-218ENST00000490283 FNIP2Q9P278 1114 aa19.09■□□□□ 0.65
SEC13-218ENST00000490283 SMIM28A0A1B0GU29 152 aa19.08■□□□□ 0.64
SEC13-218ENST00000490283 TMEM189-UBE2V1I3L0A0 370 aa19.08■□□□□ 0.64
SEC13-218ENST00000490283 HNRNPDLO14979 420 aaKnown RBP19.08■□□□□ 0.64
SEC13-218ENST00000490283 C1RP00736 705 aa19.08■□□□□ 0.64
SEC13-218ENST00000490283 SP100P23497 879 aaPredicted RBP19.08■□□□□ 0.64
SEC13-218ENST00000490283 SLC39A14Q15043 492 aa19.08■□□□□ 0.64
SEC13-218ENST00000490283 NAB2Q15742 525 aa19.08■□□□□ 0.64
SEC13-218ENST00000490283 KYAT1Q16773 422 aa19.08■□□□□ 0.64
SEC13-218ENST00000490283 DCLRE1AQ6PJP8 1040 aa19.08■□□□□ 0.64
SEC13-218ENST00000490283 CCDC73Q6ZRK6 1079 aa19.08■□□□□ 0.64
SEC13-218ENST00000490283 DDX27Q96GQ7 796 aaKnown RBP19.08■□□□□ 0.64
SEC13-218ENST00000490283 CLIC6Q96NY7 704 aa19.08■□□□□ 0.64
SEC13-218ENST00000490283 POMKQ9H5K3 350 aa19.08■□□□□ 0.64
SEC13-218ENST00000490283 MORC2Q9Y6X9 1032 aaPredicted RBP19.08■□□□□ 0.64
SEC13-218ENST00000490283 PRR33A8MZF0 331 aa19.07■□□□□ 0.64
SEC13-218ENST00000490283 WEE2P0C1S8 567 aa19.07■□□□□ 0.64
SEC13-218ENST00000490283 ZNF131P52739 623 aa19.07■□□□□ 0.64
SEC13-218ENST00000490283 MCL1Q07820 350 aa19.07■□□□□ 0.64
SEC13-218ENST00000490283 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.07■□□□□ 0.64
SEC13-218ENST00000490283 C15orf39Q6ZRI6 1047 aa19.07■□□□□ 0.64
SEC13-218ENST00000490283 SV2BQ7L1I2 683 aa19.07■□□□□ 0.64
SEC13-218ENST00000490283 GPR149Q86SP6 731 aa19.07■□□□□ 0.64
SEC13-218ENST00000490283 PALB2Q86YC2 1186 aa19.07■□□□□ 0.64
SEC13-218ENST00000490283 GLYCTKQ8IVS8 523 aa19.07■□□□□ 0.64
SEC13-218ENST00000490283 TDRD5Q8NAT2 981 aaKnown RBP19.07■□□□□ 0.64
SEC13-218ENST00000490283 LRRC15Q8TF66 581 aa19.07■□□□□ 0.64
SEC13-218ENST00000490283 HDAC7Q8WUI4 952 aa19.07■□□□□ 0.64
SEC13-218ENST00000490283 PIK3R5Q8WYR1 880 aa19.07■□□□□ 0.64
SEC13-218ENST00000490283 ZBTB45Q96K62 511 aaPredicted RBP19.07■□□□□ 0.64
SEC13-218ENST00000490283 CXCL16Q9H2A7 254 aa19.07■□□□□ 0.64
SEC13-218ENST00000490283 PLEKHA4Q9H4M7 779 aa19.07■□□□□ 0.64
SEC13-218ENST00000490283 CNTN3Q9P232 1028 aa19.07■□□□□ 0.64
SEC13-218ENST00000490283 TBX20Q9UMR3 447 aa19.07■□□□□ 0.64
SEC13-218ENST00000490283 HCN4Q9Y3Q4 1203 aa19.07■□□□□ 0.64
SEC13-218ENST00000490283 ABLIM1O14639 778 aa19.06■□□□□ 0.64
SEC13-218ENST00000490283 KCNE1P15382 129 aa19.06■□□□□ 0.64
SEC13-218ENST00000490283 STAT6P42226 847 aa19.06■□□□□ 0.64
SEC13-218ENST00000490283 NASPP49321 788 aaPredicted RBP19.06■□□□□ 0.64
SEC13-218ENST00000490283 CLCNKBP51801 687 aa19.06■□□□□ 0.64
SEC13-218ENST00000490283 PSMD5Q16401 504 aa19.06■□□□□ 0.64
SEC13-218ENST00000490283 XKR4Q5GH76 650 aa19.06■□□□□ 0.64
SEC13-218ENST00000490283 RTP2Q5QGT7 225 aa19.06■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms