RNA–Protein interactions for RNA: ENST00000490099.5

TMEM39A-210, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 868 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-210ENST00000490099 HIP1RO75146 1068 aa10.7□□□□□ -0.7
TMEM39A-210ENST00000490099 URODP06132 367 aa10.7□□□□□ -0.7
TMEM39A-210ENST00000490099 THP07101 528 aa10.7□□□□□ -0.7
TMEM39A-210ENST00000490099 ADH1AP07327 375 aa10.7□□□□□ -0.7
TMEM39A-210ENST00000490099 PEX3P56589 373 aa10.7□□□□□ -0.7
TMEM39A-210ENST00000490099 SIGLEC14Q08ET2 396 aa10.7□□□□□ -0.7
TMEM39A-210ENST00000490099 HSP90AA2PQ14568 343 aaPredicted RBP10.7□□□□□ -0.7
TMEM39A-210ENST00000490099 USP41Q3LFD5 358 aa10.7□□□□□ -0.7
TMEM39A-210ENST00000490099 ARSHQ5FYA8 562 aa10.7□□□□□ -0.7
TMEM39A-210ENST00000490099 MCTP1Q6DN14 999 aa10.7□□□□□ -0.7
TMEM39A-210ENST00000490099 TMC5Q6UXY8 1006 aa10.7□□□□□ -0.7
TMEM39A-210ENST00000490099 DRC1Q96MC2 740 aa10.7□□□□□ -0.7
TMEM39A-210ENST00000490099 MFSD14AQ96MC6 490 aa10.7□□□□□ -0.7
TMEM39A-210ENST00000490099 PPP1R10Q96QC0 940 aaKnown RBP10.7□□□□□ -0.7
TMEM39A-210ENST00000490099 ADPGKQ9BRR6 497 aa10.7□□□□□ -0.7
TMEM39A-210ENST00000490099 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.7□□□□□ -0.7
TMEM39A-210ENST00000490099 PARP2Q9UGN5 583 aa10.7□□□□□ -0.7
TMEM39A-210ENST00000490099 SMC3Q9UQE7 1217 aa10.7□□□□□ -0.7
TMEM39A-210ENST00000490099 TDRD15B5MCY1 1934 aaKnown RBP10.69□□□□□ -0.7
TMEM39A-210ENST00000490099 TMEM221A6NGB7 291 aa10.69□□□□□ -0.7
TMEM39A-210ENST00000490099 H3BQV1 296 aa10.69□□□□□ -0.7
TMEM39A-210ENST00000490099 M0R296 226 aa10.69□□□□□ -0.7
TMEM39A-210ENST00000490099 MEFVO15553 781 aaPredicted RBP10.69□□□□□ -0.7
TMEM39A-210ENST00000490099 PPP1R37O75864 691 aa10.69□□□□□ -0.7
TMEM39A-210ENST00000490099 SSBP05455 408 aaKnown RBP eCLIP10.69□□□□□ -0.7
TMEM39A-210ENST00000490099 WEE2P0C1S8 567 aa10.69□□□□□ -0.7
TMEM39A-210ENST00000490099 IGFBP6P24592 240 aaPredicted RBP10.69□□□□□ -0.7
TMEM39A-210ENST00000490099 GRM5P41594 1212 aa10.69□□□□□ -0.7
TMEM39A-210ENST00000490099 LARP1BQ659C4 914 aaKnown RBP10.69□□□□□ -0.7
TMEM39A-210ENST00000490099 BRAPQ7Z569 592 aa10.69□□□□□ -0.7
TMEM39A-210ENST00000490099 TMEM87AQ8NBN3 555 aa10.69□□□□□ -0.7
TMEM39A-210ENST00000490099 TMEM161BQ8NDZ6 487 aa10.69□□□□□ -0.7
TMEM39A-210ENST00000490099 LNX1Q8TBB1 728 aaPredicted RBP10.69□□□□□ -0.7
TMEM39A-210ENST00000490099 LRRC15Q8TF66 581 aa10.69□□□□□ -0.7
TMEM39A-210ENST00000490099 PIK3R5Q8WYR1 880 aa10.69□□□□□ -0.7
TMEM39A-210ENST00000490099 RABGGTAQ92696 567 aa10.69□□□□□ -0.7
TMEM39A-210ENST00000490099 ZNF707Q96C28 371 aaPredicted RBP10.69□□□□□ -0.7
TMEM39A-210ENST00000490099 B3GALT6Q96L58 329 aa10.69□□□□□ -0.7
TMEM39A-210ENST00000490099 CLSTN3Q9BQT9 956 aa10.69□□□□□ -0.7
TMEM39A-210ENST00000490099 NT5C3AQ9H0P0 336 aa10.69□□□□□ -0.7
TMEM39A-210ENST00000490099 CDT1Q9H211 546 aa10.69□□□□□ -0.7
TMEM39A-210ENST00000490099 PLEKHA4Q9H4M7 779 aa10.69□□□□□ -0.7
TMEM39A-210ENST00000490099 CACNG4Q9UBN1 327 aa10.69□□□□□ -0.7
TMEM39A-210ENST00000490099 DPP7Q9UHL4 492 aa10.69□□□□□ -0.7
TMEM39A-210ENST00000490099 SF3B1O75533 1304 aaKnown RBP eCLIP10.68□□□□□ -0.7
TMEM39A-210ENST00000490099 SMIM28A0A1B0GU29 152 aa10.68□□□□□ -0.7
TMEM39A-210ENST00000490099 VWA3AA6NCI4 1184 aa10.68□□□□□ -0.7
TMEM39A-210ENST00000490099 CCDC169A6NNP5 214 aa10.68□□□□□ -0.7
TMEM39A-210ENST00000490099 C2CD2LO14523 706 aa10.68□□□□□ -0.7
TMEM39A-210ENST00000490099 TGM5O43548 720 aa10.68□□□□□ -0.7
TMEM39A-210ENST00000490099 TADA2AO75478 443 aa10.68□□□□□ -0.7
TMEM39A-210ENST00000490099 KIF4AO95239 1232 aa10.68□□□□□ -0.7
TMEM39A-210ENST00000490099 BMP15O95972 392 aa10.68□□□□□ -0.7
TMEM39A-210ENST00000490099 GLUD1P00367 558 aa10.68□□□□□ -0.7
TMEM39A-210ENST00000490099 PLA2G4BP0C869 781 aa10.68□□□□□ -0.7
TMEM39A-210ENST00000490099 MCF2P10911 925 aa10.68□□□□□ -0.7
TMEM39A-210ENST00000490099 PLS3P13797 630 aa10.68□□□□□ -0.7
TMEM39A-210ENST00000490099 KCNE1P15382 129 aa10.68□□□□□ -0.7
TMEM39A-210ENST00000490099 FGFR3P22607 806 aa10.68□□□□□ -0.7
TMEM39A-210ENST00000490099 PLCB2Q00722 1185 aa10.68□□□□□ -0.7
TMEM39A-210ENST00000490099 CREMQ03060 361 aa10.68□□□□□ -0.7
TMEM39A-210ENST00000490099 DMP1Q13316 513 aaPredicted RBP10.68□□□□□ -0.7
TMEM39A-210ENST00000490099 UPP1Q16831 310 aa10.68□□□□□ -0.7
TMEM39A-210ENST00000490099 RTP2Q5QGT7 225 aa10.68□□□□□ -0.7
TMEM39A-210ENST00000490099 DCLRE1AQ6PJP8 1040 aa10.68□□□□□ -0.7
TMEM39A-210ENST00000490099 ZPBP2Q6X784 338 aa10.68□□□□□ -0.7
TMEM39A-210ENST00000490099 APBB1IPQ7Z5R6 666 aaPredicted RBP10.68□□□□□ -0.7
TMEM39A-210ENST00000490099 UBALD2Q8IYN6 164 aa10.68□□□□□ -0.7
TMEM39A-210ENST00000490099 FBXL6Q8N531 539 aa10.68□□□□□ -0.7
TMEM39A-210ENST00000490099 KREMEN2Q8NCW0 462 aa10.68□□□□□ -0.7
TMEM39A-210ENST00000490099 FAM122AQ96E09 287 aa10.68□□□□□ -0.7
TMEM39A-210ENST00000490099 TARS2Q9BW92 718 aaKnown RBP10.68□□□□□ -0.7
TMEM39A-210ENST00000490099 MRPL4Q9BYD3 311 aaKnown RBP10.68□□□□□ -0.7
TMEM39A-210ENST00000490099 WDR6Q9NNW5 1121 aaKnown RBP10.68□□□□□ -0.7
TMEM39A-210ENST00000490099 KMT5AQ9NQR1 393 aa10.68□□□□□ -0.7
TMEM39A-210ENST00000490099 MAN1C1Q9NR34 630 aa10.68□□□□□ -0.7
TMEM39A-210ENST00000490099 SORCS3Q9UPU3 1222 aa10.68□□□□□ -0.7
TMEM39A-210ENST00000490099 CCDC195A0A1B0GUA6 201 aa10.67□□□□□ -0.7
TMEM39A-210ENST00000490099 CASTOR2A6NHX0 329 aa10.67□□□□□ -0.7
TMEM39A-210ENST00000490099 SFI1A8K8P3 1242 aa10.67□□□□□ -0.7
TMEM39A-210ENST00000490099 SLC16A4O15374 487 aa10.67□□□□□ -0.7
TMEM39A-210ENST00000490099 TOM1L1O75674 476 aa10.67□□□□□ -0.7
TMEM39A-210ENST00000490099 MAPTP10636 758 aaKnown RBP10.67□□□□□ -0.7
TMEM39A-210ENST00000490099 SCP2P22307 547 aa10.67□□□□□ -0.7
TMEM39A-210ENST00000490099 CA8P35219 290 aa10.67□□□□□ -0.7
TMEM39A-210ENST00000490099 ZNF131P52739 623 aa10.67□□□□□ -0.7
TMEM39A-210ENST00000490099 GRIN1Q05586 938 aa10.67□□□□□ -0.7
TMEM39A-210ENST00000490099 ELAVL2Q12926 359 aaKnown RBP10.67□□□□□ -0.7
TMEM39A-210ENST00000490099 PTPAQ15257 358 aa10.67□□□□□ -0.7
TMEM39A-210ENST00000490099 FAM171A1Q5VUB5 890 aa10.67□□□□□ -0.7
TMEM39A-210ENST00000490099 OTOP3Q7RTS5 596 aa10.67□□□□□ -0.7
TMEM39A-210ENST00000490099 CEP120Q8N960 986 aa10.67□□□□□ -0.7
TMEM39A-210ENST00000490099 RIN2Q8WYP3 895 aaPredicted RBP10.67□□□□□ -0.7
TMEM39A-210ENST00000490099 PBXIP1Q96AQ6 731 aa10.67□□□□□ -0.7
TMEM39A-210ENST00000490099 INTS4Q96HW7 963 aaKnown RBP10.67□□□□□ -0.7
TMEM39A-210ENST00000490099 UROC1Q96N76 676 aa10.67□□□□□ -0.7
TMEM39A-210ENST00000490099 ZMAT2Q96NC0 199 aaKnown RBP10.67□□□□□ -0.7
TMEM39A-210ENST00000490099 TTPALQ9BTX7 342 aa10.67□□□□□ -0.7
TMEM39A-210ENST00000490099 BACH2Q9BYV9 841 aa10.67□□□□□ -0.7
TMEM39A-210ENST00000490099 CCSER1Q9C0I3 900 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms