RNA–Protein interactions for RNA: ENST00000490035.6

LSAMP-205, Transcript of limbic system associated membrane protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSAMP, Length 9,446 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-205ENST00000490035 PSMC3IPQ9P2W1 217 aaPredicted RBP9.33□□□□□ -0.92
LSAMP-205ENST00000490035 GTPBP10A4D1E9 387 aaKnown RBP9.32□□□□□ -0.92
LSAMP-205ENST00000490035 E7ENQ6 273 aa9.32□□□□□ -0.92
LSAMP-205ENST00000490035 ALDH1A1P00352 501 aa9.32□□□□□ -0.92
LSAMP-205ENST00000490035 PYGMP11217 842 aa9.32□□□□□ -0.92
LSAMP-205ENST00000490035 RGS4P49798 205 aa9.32□□□□□ -0.92
LSAMP-205ENST00000490035 CEP55Q53EZ4 464 aa9.32□□□□□ -0.92
LSAMP-205ENST00000490035 ZBTB9Q96C00 473 aa9.32□□□□□ -0.92
LSAMP-205ENST00000490035 CD209Q9NNX6 404 aa9.32□□□□□ -0.92
LSAMP-205ENST00000490035 PIH1D3Q9NQM4 214 aaKnown RBP9.32□□□□□ -0.92
LSAMP-205ENST00000490035 NDUFA13Q9P0J0 144 aa9.32□□□□□ -0.92
LSAMP-205ENST00000490035 A0A1B0GTH6 734 aa9.32□□□□□ -0.92
LSAMP-205ENST00000490035 SFSWAPQ12872 951 aaKnown RBP9.32□□□□□ -0.92
LSAMP-205ENST00000490035 TRIM69Q86WT6 500 aa9.32□□□□□ -0.92
LSAMP-205ENST00000490035 SH3RF3Q8TEJ3 882 aaPredicted RBP9.32□□□□□ -0.92
LSAMP-205ENST00000490035 RNPC3Q96LT9 517 aaKnown RBP9.32□□□□□ -0.92
LSAMP-205ENST00000490035 RANBP17Q9H2T7 1088 aaKnown RBP9.32□□□□□ -0.92
LSAMP-205ENST00000490035 DBNDD1Q9H9R9 158 aa9.32□□□□□ -0.92
LSAMP-205ENST00000490035 MYO1CO00159 1063 aa9.32□□□□□ -0.92
LSAMP-205ENST00000490035 TBC1D4O60343 1298 aa9.32□□□□□ -0.92
LSAMP-205ENST00000490035 PLEKHA8P1O95397 391 aa9.32□□□□□ -0.92
LSAMP-205ENST00000490035 CYBBP04839 570 aa9.32□□□□□ -0.92
LSAMP-205ENST00000490035 RBP5P82980 135 aa9.32□□□□□ -0.92
LSAMP-205ENST00000490035 CYFIP1Q7L576 1253 aa9.32□□□□□ -0.92
LSAMP-205ENST00000490035 MFN1Q8IWA4 741 aa9.32□□□□□ -0.92
LSAMP-205ENST00000490035 ADGRF4Q8IZF3 695 aa9.32□□□□□ -0.92
LSAMP-205ENST00000490035 CATSPERBQ9H7T0 1116 aa9.32□□□□□ -0.92
LSAMP-205ENST00000490035 SEC31BQ9NQW1 1179 aa9.32□□□□□ -0.92
LSAMP-205ENST00000490035 KANSL1LA0AUZ9 987 aa9.32□□□□□ -0.92
LSAMP-205ENST00000490035 ANXA11P50995 505 aaKnown RBP9.32□□□□□ -0.92
LSAMP-205ENST00000490035 MAPRE1Q15691 268 aaKnown RBP9.32□□□□□ -0.92
LSAMP-205ENST00000490035 ADRM1Q16186 407 aa9.32□□□□□ -0.92
LSAMP-205ENST00000490035 XKR3Q5GH77 459 aa9.32□□□□□ -0.92
LSAMP-205ENST00000490035 ASIC4Q96FT7 647 aa9.32□□□□□ -0.92
LSAMP-205ENST00000490035 FAM213AQ9BRX8 229 aa9.32□□□□□ -0.92
LSAMP-205ENST00000490035 VPS11Q9H270 941 aa9.32□□□□□ -0.92
LSAMP-205ENST00000490035 SNX24Q9Y343 169 aa9.32□□□□□ -0.92
LSAMP-205ENST00000490035 SPATA31A3Q5VYP0 1347 aa9.32□□□□□ -0.92
LSAMP-205ENST00000490035 RHOBTB3O94955 611 aa9.32□□□□□ -0.92
LSAMP-205ENST00000490035 MAP4P27816 1152 aaKnown RBP9.32□□□□□ -0.92
LSAMP-205ENST00000490035 GFPT1Q06210 699 aaPredicted RBP9.32□□□□□ -0.92
LSAMP-205ENST00000490035 SF3A3Q12874 501 aaKnown RBP eCLIP9.32□□□□□ -0.92
LSAMP-205ENST00000490035 PDIA2Q13087 525 aaKnown RBP9.32□□□□□ -0.92
LSAMP-205ENST00000490035 TXNRD1Q16881 649 aa9.32□□□□□ -0.92
LSAMP-205ENST00000490035 RAPGEF5Q92565 580 aa9.32□□□□□ -0.92
LSAMP-205ENST00000490035 MMP19Q99542 508 aa9.32□□□□□ -0.92
LSAMP-205ENST00000490035 INTS2Q9H0H0 1204 aaKnown RBP9.32□□□□□ -0.92
LSAMP-205ENST00000490035 CCDC134Q9H6E4 229 aa9.32□□□□□ -0.92
LSAMP-205ENST00000490035 ANLNQ9NQW6 1124 aa9.32□□□□□ -0.92
LSAMP-205ENST00000490035 CRB1P82279 1406 aa9.32□□□□□ -0.92
LSAMP-205ENST00000490035 PRKAB2O43741 272 aa9.32□□□□□ -0.92
LSAMP-205ENST00000490035 GCLMP48507 274 aa9.32□□□□□ -0.92
LSAMP-205ENST00000490035 ACTR2P61160 394 aa9.32□□□□□ -0.92
LSAMP-205ENST00000490035 KBTBD12Q3ZCT8 623 aa9.32□□□□□ -0.92
LSAMP-205ENST00000490035 FAM102AQ5T9C2 384 aaPredicted RBP9.32□□□□□ -0.92
LSAMP-205ENST00000490035 IZUMO3Q5VZ72 239 aa9.32□□□□□ -0.92
LSAMP-205ENST00000490035 DHX40Q8IX18 779 aaKnown RBP9.32□□□□□ -0.92
LSAMP-205ENST00000490035 PIGBQ92521 554 aa9.32□□□□□ -0.92
LSAMP-205ENST00000490035 EEF2KMTQ96G04 330 aa9.32□□□□□ -0.92
LSAMP-205ENST00000490035 DCUN1D1Q96GG9 259 aa9.32□□□□□ -0.92
LSAMP-205ENST00000490035 ECT2Q9H8V3 914 aa9.32□□□□□ -0.92
LSAMP-205ENST00000490035 SATB2Q9UPW6 733 aa9.32□□□□□ -0.92
LSAMP-205ENST00000490035 USP17L15C9J2P7 530 aa9.32□□□□□ -0.92
LSAMP-205ENST00000490035 USP17L13C9JLJ4 530 aa9.32□□□□□ -0.92
LSAMP-205ENST00000490035 USP17L11C9JVI0 530 aa9.32□□□□□ -0.92
LSAMP-205ENST00000490035 USP17L18D6R9N7 530 aa9.32□□□□□ -0.92
LSAMP-205ENST00000490035 USP17L22D6RA61 530 aa9.32□□□□□ -0.92
LSAMP-205ENST00000490035 USP17L17D6RBQ6 530 aa9.32□□□□□ -0.92
LSAMP-205ENST00000490035 USP17L19D6RCP7 530 aa9.32□□□□□ -0.92
LSAMP-205ENST00000490035 USP17L20D6RJB6 530 aa9.32□□□□□ -0.92
LSAMP-205ENST00000490035 YWHABP31946 246 aaKnown RBP9.32□□□□□ -0.92
LSAMP-205ENST00000490035 USP17L24Q0WX57 530 aa9.32□□□□□ -0.92
LSAMP-205ENST00000490035 ZNF235Q14590 738 aa9.32□□□□□ -0.92
LSAMP-205ENST00000490035 RSAD1Q9HA92 442 aa9.32□□□□□ -0.92
LSAMP-205ENST00000490035 POLE3Q9NRF9 147 aa9.32□□□□□ -0.92
LSAMP-205ENST00000490035 APPL1Q9UKG1 709 aa9.32□□□□□ -0.92
LSAMP-205ENST00000490035 GDAQ9Y2T3 454 aa9.32□□□□□ -0.92
LSAMP-205ENST00000490035 CYP2C8P10632 490 aa9.32□□□□□ -0.92
LSAMP-205ENST00000490035 C4BPBP20851 252 aa9.32□□□□□ -0.92
LSAMP-205ENST00000490035 STKLD1Q8NE28 680 aa9.32□□□□□ -0.92
LSAMP-205ENST00000490035 VPS37AQ8NEZ2 397 aa9.32□□□□□ -0.92
LSAMP-205ENST00000490035 PIGOQ8TEQ8 1089 aa9.32□□□□□ -0.92
LSAMP-205ENST00000490035 FIS1Q9Y3D6 152 aa9.32□□□□□ -0.92
LSAMP-205ENST00000490035 FAM32AQ9Y421 112 aaKnown RBP9.32□□□□□ -0.92
LSAMP-205ENST00000490035 FAM107AO95990 144 aa9.31□□□□□ -0.92
LSAMP-205ENST00000490035 ARSEP51690 589 aa9.31□□□□□ -0.92
LSAMP-205ENST00000490035 ZC3H12BQ5HYM0 836 aaKnown RBP9.31□□□□□ -0.92
LSAMP-205ENST00000490035 KHDRBS2Q5VWX1 349 aaKnown RBP9.31□□□□□ -0.92
LSAMP-205ENST00000490035 PNPLA6Q8IY17 1366 aa9.31□□□□□ -0.92
LSAMP-205ENST00000490035 SMARCAD1Q9H4L7 1026 aa9.31□□□□□ -0.92
LSAMP-205ENST00000490035 KLC4Q9NSK0 619 aa9.31□□□□□ -0.92
LSAMP-205ENST00000490035 ZMYM2Q9UBW7 1377 aa9.31□□□□□ -0.92
LSAMP-205ENST00000490035 FLT1P17948 1338 aa9.31□□□□□ -0.92
LSAMP-205ENST00000490035 M0QYV0 167 aa9.31□□□□□ -0.92
LSAMP-205ENST00000490035 SRGNP10124 158 aa9.31□□□□□ -0.92
LSAMP-205ENST00000490035 CCND1P24385 295 aa9.31□□□□□ -0.92
LSAMP-205ENST00000490035 PNPLA4P41247 253 aa9.31□□□□□ -0.92
LSAMP-205ENST00000490035 SCARA5Q6ZMJ2 495 aa9.31□□□□□ -0.92
LSAMP-205ENST00000490035 PPM1NQ8N819 430 aa9.31□□□□□ -0.92
LSAMP-205ENST00000490035 TUBGCP4Q9UGJ1 667 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms