RNA–Protein interactions for RNA: ENST00000489868.5

CCDC39-206, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 534 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-206ENST00000489868 RAP2AP10114 183 aa6.93□□□□□ -1.3
CCDC39-206ENST00000489868 IL2RBP14784 551 aa6.93□□□□□ -1.3
CCDC39-206ENST00000489868 CCND1P24385 295 aa6.93□□□□□ -1.3
CCDC39-206ENST00000489868 ZFP36P26651 326 aaKnown RBP6.93□□□□□ -1.3
CCDC39-206ENST00000489868 RECQLP46063 649 aaPredicted RBP6.93□□□□□ -1.3
CCDC39-206ENST00000489868 FXR1P51114 621 aaKnown RBP eCLIP6.93□□□□□ -1.3
CCDC39-206ENST00000489868 ADKP55263 362 aaKnown RBP6.93□□□□□ -1.3
CCDC39-206ENST00000489868 CLRN1P58418 232 aa6.93□□□□□ -1.3
CCDC39-206ENST00000489868 PTH1RQ03431 593 aa6.93□□□□□ -1.3
CCDC39-206ENST00000489868 MCL1Q07820 350 aa6.93□□□□□ -1.3
CCDC39-206ENST00000489868 RABL3Q5HYI8 236 aa6.93□□□□□ -1.3
CCDC39-206ENST00000489868 ZBTB46Q86UZ6 589 aa6.93□□□□□ -1.3
CCDC39-206ENST00000489868 CPA6Q8N4T0 437 aa6.93□□□□□ -1.3
CCDC39-206ENST00000489868 DCBLD1Q8N8Z6 715 aa6.93□□□□□ -1.3
CCDC39-206ENST00000489868 CASKIN2Q8WXE0 1202 aa6.93□□□□□ -1.3
CCDC39-206ENST00000489868 HOOK2Q96ED9 719 aa6.93□□□□□ -1.3
CCDC39-206ENST00000489868 TEX101Q9BY14 249 aa6.93□□□□□ -1.3
CCDC39-206ENST00000489868 SORCS3Q9UPU3 1222 aa6.93□□□□□ -1.3
CCDC39-206ENST00000489868 PCDHB1Q9Y5F3 818 aa6.93□□□□□ -1.3
CCDC39-206ENST00000489868 MYBBP1AQ9BQG0 1328 aaKnown RBP6.93□□□□□ -1.3
CCDC39-206ENST00000489868 NPIPB8E9PQR5 432 aa6.92□□□□□ -1.3
CCDC39-206ENST00000489868 DDCP20711 480 aa6.92□□□□□ -1.3
CCDC39-206ENST00000489868 SLC16A1P53985 500 aa6.92□□□□□ -1.3
CCDC39-206ENST00000489868 RAP2BP61225 183 aa6.92□□□□□ -1.3
CCDC39-206ENST00000489868 FAM189BP81408 668 aa6.92□□□□□ -1.3
CCDC39-206ENST00000489868 NHLH2Q02577 135 aa6.92□□□□□ -1.3
CCDC39-206ENST00000489868 TTF1Q15361 905 aaPredicted RBP6.92□□□□□ -1.3
CCDC39-206ENST00000489868 UAP1L1Q3KQV9 507 aa6.92□□□□□ -1.3
CCDC39-206ENST00000489868 TMEM240Q5SV17 173 aa6.92□□□□□ -1.3
CCDC39-206ENST00000489868 OTUD7BQ6GQQ9 843 aa6.92□□□□□ -1.3
CCDC39-206ENST00000489868 EFCAB12Q6NXP0 572 aa6.92□□□□□ -1.3
CCDC39-206ENST00000489868 RAVER1Q8IY67 606 aaKnown RBP6.92□□□□□ -1.3
CCDC39-206ENST00000489868 CYFIP2Q96F07 1278 aa6.92□□□□□ -1.3
CCDC39-206ENST00000489868 DMRTA2Q96SC8 542 aa6.92□□□□□ -1.3
CCDC39-206ENST00000489868 TMEM140Q9NV12 185 aa6.92□□□□□ -1.3
CCDC39-206ENST00000489868 FBXO34Q9NWN3 711 aa6.92□□□□□ -1.3
CCDC39-206ENST00000489868 PARPBPQ9NWS1 579 aa6.92□□□□□ -1.3
CCDC39-206ENST00000489868 SAP30BPQ9UHR5 308 aaKnown RBP6.92□□□□□ -1.3
CCDC39-206ENST00000489868 THRAP3Q9Y2W1 955 aaKnown RBP6.92□□□□□ -1.3
CCDC39-206ENST00000489868 CHST2Q9Y4C5 530 aa6.92□□□□□ -1.3
CCDC39-206ENST00000489868 ZNF185O15231 689 aa6.91□□□□□ -1.3
CCDC39-206ENST00000489868 SNUPNO95149 360 aaKnown RBP6.91□□□□□ -1.3
CCDC39-206ENST00000489868 TACR2P21452 398 aa6.91□□□□□ -1.3
CCDC39-206ENST00000489868 CHN2P52757 468 aa6.91□□□□□ -1.3
CCDC39-206ENST00000489868 ATXN7L2Q5T6C5 722 aaPredicted RBP6.91□□□□□ -1.3
CCDC39-206ENST00000489868 FAM102AQ5T9C2 384 aaPredicted RBP6.91□□□□□ -1.3
CCDC39-206ENST00000489868 MIGA2Q7L4E1 593 aa6.91□□□□□ -1.3
CCDC39-206ENST00000489868 IFI44Q8TCB0 444 aa6.91□□□□□ -1.3
CCDC39-206ENST00000489868 CPT1CQ8TCG5 803 aa6.91□□□□□ -1.3
CCDC39-206ENST00000489868 HDAC10Q969S8 669 aa6.91□□□□□ -1.3
CCDC39-206ENST00000489868 CSRNP2Q9H175 543 aa6.91□□□□□ -1.3
CCDC39-206ENST00000489868 MANSC1Q9H8J5 431 aa6.91□□□□□ -1.3
CCDC39-206ENST00000489868 SLC2A4RGQ9NR83 387 aa6.91□□□□□ -1.3
CCDC39-206ENST00000489868 MOCS1Q9NZB8 636 aa6.91□□□□□ -1.3
CCDC39-206ENST00000489868 GPRC5BQ9NZH0 403 aa6.91□□□□□ -1.3
CCDC39-206ENST00000489868 DRGXA6NNA5 263 aa6.9□□□□□ -1.3
CCDC39-206ENST00000489868 NARSO43776 548 aaKnown RBP6.9□□□□□ -1.3
CCDC39-206ENST00000489868 ABLIM3O94929 683 aa6.9□□□□□ -1.3
CCDC39-206ENST00000489868 PRSS23O95084 383 aa6.9□□□□□ -1.3
CCDC39-206ENST00000489868 SCAF4O95104 1147 aaKnown RBP6.9□□□□□ -1.3
CCDC39-206ENST00000489868 SNRPA1P09661 255 aaKnown RBP6.9□□□□□ -1.3
CCDC39-206ENST00000489868 C6P13671 934 aa6.9□□□□□ -1.3
CCDC39-206ENST00000489868 ZSCAN20P17040 1043 aaPredicted RBP6.9□□□□□ -1.3
CCDC39-206ENST00000489868 ATP5JP18859 108 aa6.9□□□□□ -1.3
CCDC39-206ENST00000489868 SLC6A2P23975 617 aa6.9□□□□□ -1.3
CCDC39-206ENST00000489868 RNASE9P60153 205 aaKnown RBP6.9□□□□□ -1.3
CCDC39-206ENST00000489868 ZXDAP98168 799 aa6.9□□□□□ -1.3
CCDC39-206ENST00000489868 CDC42EP1Q00587 391 aa6.9□□□□□ -1.3
CCDC39-206ENST00000489868 DSC2Q02487 901 aa6.9□□□□□ -1.3
CCDC39-206ENST00000489868 LSM12Q3MHD2 195 aaKnown RBP6.9□□□□□ -1.3
CCDC39-206ENST00000489868 RRP12Q5JTH9 1297 aaKnown RBP6.9□□□□□ -1.3
CCDC39-206ENST00000489868 UBE3BQ7Z3V4 1068 aa6.9□□□□□ -1.3
CCDC39-206ENST00000489868 ZFP28Q8NHY6 868 aa6.9□□□□□ -1.3
CCDC39-206ENST00000489868 TMX3Q96JJ7 454 aa6.9□□□□□ -1.3
CCDC39-206ENST00000489868 MRGPRX4Q96LA9 322 aa6.9□□□□□ -1.3
CCDC39-206ENST00000489868 AASDHPPTQ9NRN7 309 aa6.9□□□□□ -1.3
CCDC39-206ENST00000489868 TDP1Q9NUW8 608 aa6.9□□□□□ -1.3
CCDC39-206ENST00000489868 POGKQ9P215 609 aa6.9□□□□□ -1.3
CCDC39-206ENST00000489868 EIF2B4Q9UI10 523 aaKnown RBP6.9□□□□□ -1.3
CCDC39-206ENST00000489868 TRIM24O15164 1050 aa6.89□□□□□ -1.31
CCDC39-206ENST00000489868 SLC6A4P31645 630 aa6.89□□□□□ -1.31
CCDC39-206ENST00000489868 ZNF280AP59817 542 aaPredicted RBP6.89□□□□□ -1.31
CCDC39-206ENST00000489868 TUBA3CQ13748 450 aa6.89□□□□□ -1.31
CCDC39-206ENST00000489868 PLEKHG6Q3KR16 790 aa6.89□□□□□ -1.31
CCDC39-206ENST00000489868 ZNF529Q6P280 563 aa6.89□□□□□ -1.31
CCDC39-206ENST00000489868 TUBA3EQ6PEY2 450 aa6.89□□□□□ -1.31
CCDC39-206ENST00000489868 SEM1Q6ZVN7 128 aa6.89□□□□□ -1.31
CCDC39-206ENST00000489868 PLXDC1Q8IUK5 500 aa6.89□□□□□ -1.31
CCDC39-206ENST00000489868 PHACTR3Q96KR7 559 aa6.89□□□□□ -1.31
CCDC39-206ENST00000489868 RTFDC1Q9BY42 306 aaPredicted RBP6.89□□□□□ -1.31
CCDC39-206ENST00000489868 ZNF341Q9BYN7 854 aa6.89□□□□□ -1.31
CCDC39-206ENST00000489868 TCF7L1Q9HCS4 588 aa6.89□□□□□ -1.31
CCDC39-206ENST00000489868 IP6K2Q9UHH9 426 aa6.89□□□□□ -1.31
CCDC39-206ENST00000489868 CLCA2Q9UQC9 943 aa6.89□□□□□ -1.31
CCDC39-206ENST00000489868 TCRBV7S2A1N4TA0A589 114 aa6.88□□□□□ -1.31
CCDC39-206ENST00000489868 SBK3P0C264 359 aa6.88□□□□□ -1.31
CCDC39-206ENST00000489868 RAB27AP51159 221 aa6.88□□□□□ -1.31
CCDC39-206ENST00000489868 CTXN1P60606 82 aa6.88□□□□□ -1.31
CCDC39-206ENST00000489868 PDCD4Q53EL6 469 aaKnown RBP6.88□□□□□ -1.31
CCDC39-206ENST00000489868 CATIPQ7Z7H3 387 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms