RNA–Protein interactions for RNA: ENST00000489772.5

GGA1-222, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 1, human

TSL 2

Gene GGA1, Length 1,384 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GGA1-222	ENST00000489772	UROD	P06132	367 aa		12.12	□□□□□ -0.47
GGA1-222	ENST00000489772	IDE	P14735	1019 aa		12.12	□□□□□ -0.47
GGA1-222	ENST00000489772	AMPD3	Q01432	767 aa		12.12	□□□□□ -0.47
GGA1-222	ENST00000489772	COASY	Q13057	564 aa		12.12	□□□□□ -0.47
GGA1-222	ENST00000489772	PTPN14	Q15678	1187 aa		12.12	□□□□□ -0.47
GGA1-222	ENST00000489772	KYAT1	Q16773	422 aa		12.12	□□□□□ -0.47
GGA1-222	ENST00000489772	HERC4	Q5GLZ8	1057 aa	Predicted RBP	12.12	□□□□□ -0.47
GGA1-222	ENST00000489772	KIAA1841	Q6NSI8	718 aa		12.12	□□□□□ -0.47
GGA1-222	ENST00000489772	LLGL2	Q6P1M3	1020 aa		12.12	□□□□□ -0.47
GGA1-222	ENST00000489772	TMEM184A	Q6ZMB5	413 aa		12.12	□□□□□ -0.47
GGA1-222	ENST00000489772	ZNF720	Q7Z2F6	126 aa		12.12	□□□□□ -0.47
GGA1-222	ENST00000489772	SFR1	Q86XK3	245 aa		12.12	□□□□□ -0.47
GGA1-222	ENST00000489772	AUTS2	Q8WXX7	1259 aa		12.12	□□□□□ -0.47
GGA1-222	ENST00000489772	DHX58	Q96C10	678 aa		12.12	□□□□□ -0.47
GGA1-222	ENST00000489772	DNAJC19	Q96DA6	116 aa		12.12	□□□□□ -0.47
GGA1-222	ENST00000489772	FIZ1	Q96SL8	496 aa		12.12	□□□□□ -0.47
GGA1-222	ENST00000489772	PYM1	Q9BRP8	204 aa	Known RBP	12.12	□□□□□ -0.47
GGA1-222	ENST00000489772	CXCL16	Q9H2A7	254 aa		12.12	□□□□□ -0.47
GGA1-222	ENST00000489772	MRPL44	Q9H9J2	332 aa	Known RBP	12.12	□□□□□ -0.47
GGA1-222	ENST00000489772	SLC38A7	Q9NVC3	462 aa		12.12	□□□□□ -0.47
GGA1-222	ENST00000489772	ADAM28	Q9UKQ2	775 aa		12.12	□□□□□ -0.47
GGA1-222	ENST00000489772	BARX2	Q9UMQ3	279 aa	Predicted RBP	12.12	□□□□□ -0.47
GGA1-222	ENST00000489772	ZDHHC9	Q9Y397	364 aa		12.12	□□□□□ -0.47
GGA1-222	ENST00000489772	KIAA1671	Q9BY89	1806 aa		12.11	□□□□□ -0.47
GGA1-222	ENST00000489772	MUC3A	Q02505	3323 aa		12.11	□□□□□ -0.47
GGA1-222	ENST00000489772	SMIM28	A0A1B0GU29	152 aa		12.11	□□□□□ -0.47
GGA1-222	ENST00000489772		F8W810	466 aa		12.11	□□□□□ -0.47
GGA1-222	ENST00000489772	POLR2D	O15514	142 aa	Known RBP	12.11	□□□□□ -0.47
GGA1-222	ENST00000489772	CLASP2	O75122	1294 aa	Known RBP	12.11	□□□□□ -0.47
GGA1-222	ENST00000489772	PIGR	P01833	764 aa		12.11	□□□□□ -0.47
GGA1-222	ENST00000489772	SMAD4	Q13485	552 aa	Known RBP	12.11	□□□□□ -0.47
GGA1-222	ENST00000489772	NAB2	Q15742	525 aa		12.11	□□□□□ -0.47
GGA1-222	ENST00000489772	E2F4	Q16254	413 aa		12.11	□□□□□ -0.47
GGA1-222	ENST00000489772	ZC2HC1C	Q53FD0	456 aa	Predicted RBP	12.11	□□□□□ -0.47
GGA1-222	ENST00000489772	XKR4	Q5GH76	650 aa		12.11	□□□□□ -0.47
GGA1-222	ENST00000489772	GLRA4	Q5JXX5	417 aa		12.11	□□□□□ -0.47
GGA1-222	ENST00000489772	RESP18	Q5W5W9	173 aa		12.11	□□□□□ -0.47
GGA1-222	ENST00000489772	FUT10	Q6P4F1	479 aa		12.11	□□□□□ -0.47
GGA1-222	ENST00000489772	ALKAL1	Q6UXT8	129 aa		12.11	□□□□□ -0.47
GGA1-222	ENST00000489772	TAS1R1	Q7RTX1	841 aa		12.11	□□□□□ -0.47
GGA1-222	ENST00000489772	PPFIBP1	Q86W92	1011 aa		12.11	□□□□□ -0.47
GGA1-222	ENST00000489772	MAP4K3	Q8IVH8	894 aa		12.11	□□□□□ -0.47
GGA1-222	ENST00000489772	VN1R2	Q8NFZ6	395 aa		12.11	□□□□□ -0.47
GGA1-222	ENST00000489772	RABGGTA	Q92696	567 aa		12.11	□□□□□ -0.47
GGA1-222	ENST00000489772	CASP10	Q92851	521 aa		12.11	□□□□□ -0.47
GGA1-222	ENST00000489772	HVCN1	Q96D96	273 aa		12.11	□□□□□ -0.47
GGA1-222	ENST00000489772	MSLNL	Q96KJ4	702 aa		12.11	□□□□□ -0.47
GGA1-222	ENST00000489772	SNX27	Q96L92	541 aa		12.11	□□□□□ -0.47
GGA1-222	ENST00000489772	UROC1	Q96N76	676 aa		12.11	□□□□□ -0.47
GGA1-222	ENST00000489772	PPP1R10	Q96QC0	940 aa	Known RBP	12.11	□□□□□ -0.47
GGA1-222	ENST00000489772	HERC2P3	Q9BVR0	1158 aa		12.11	□□□□□ -0.47
GGA1-222	ENST00000489772	MAGEF1	Q9HAY2	307 aa		12.11	□□□□□ -0.47
GGA1-222	ENST00000489772	KBTBD4	Q9NVX7	518 aa		12.11	□□□□□ -0.47
GGA1-222	ENST00000489772	SF3B1	O75533	1304 aa	Known RBP eCLIP	12.11	□□□□□ -0.47	7e-7	■■■■■ 29.5
GGA1-222	ENST00000489772	MYO7A	Q13402	2215 aa		12.1	□□□□□ -0.47
GGA1-222	ENST00000489772	BDP1	A6H8Y1	2624 aa		12.1	□□□□□ -0.47
GGA1-222	ENST00000489772	FRMD3	A2A2Y4	597 aa		12.1	□□□□□ -0.47
GGA1-222	ENST00000489772	TNFRSF10A	O00220	468 aa		12.1	□□□□□ -0.47
GGA1-222	ENST00000489772	C2CD2L	O14523	706 aa		12.1	□□□□□ -0.47
GGA1-222	ENST00000489772	KIF4A	O95239	1232 aa		12.1	□□□□□ -0.47
GGA1-222	ENST00000489772	EFEMP2	O95967	443 aa		12.1	□□□□□ -0.47
GGA1-222	ENST00000489772	CLTA	P09496	248 aa		12.1	□□□□□ -0.47
GGA1-222	ENST00000489772	IL9	P15248	144 aa		12.1	□□□□□ -0.47
GGA1-222	ENST00000489772	KCNE1	P15382	129 aa		12.1	□□□□□ -0.47
GGA1-222	ENST00000489772	KLRC2	P26717	231 aa		12.1	□□□□□ -0.47
GGA1-222	ENST00000489772	GLUD2	P49448	558 aa		12.1	□□□□□ -0.47
GGA1-222	ENST00000489772	RBM10	P98175	930 aa	Known RBP	12.1	□□□□□ -0.47
GGA1-222	ENST00000489772	KCNC3	Q14003	757 aa		12.1	□□□□□ -0.47
GGA1-222	ENST00000489772	USP41	Q3LFD5	358 aa		12.1	□□□□□ -0.47
GGA1-222	ENST00000489772	CCDC65	Q8IXS2	484 aa		12.1	□□□□□ -0.47
GGA1-222	ENST00000489772	RNF168	Q8IYW5	571 aa	Predicted RBP	12.1	□□□□□ -0.47
GGA1-222	ENST00000489772	SMRP1	Q8NCR6	262 aa		12.1	□□□□□ -0.47
GGA1-222	ENST00000489772	LEO1	Q8WVC0	666 aa	Predicted RBP	12.1	□□□□□ -0.47
GGA1-222	ENST00000489772	DDX27	Q96GQ7	796 aa	Known RBP	12.1	□□□□□ -0.47
GGA1-222	ENST00000489772	SPATA32	Q96LK8	384 aa		12.1	□□□□□ -0.47
GGA1-222	ENST00000489772	NECAB3	Q96P71	396 aa	Predicted RBP	12.1	□□□□□ -0.47
GGA1-222	ENST00000489772	PAAF1	Q9BRP4	392 aa		12.1	□□□□□ -0.47
GGA1-222	ENST00000489772	MSTO1	Q9BUK6	570 aa		12.1	□□□□□ -0.47
GGA1-222	ENST00000489772	PLEKHA5	Q9HAU0	1116 aa		12.1	□□□□□ -0.47
GGA1-222	ENST00000489772	OLFML3	Q9NRN5	406 aa		12.1	□□□□□ -0.47
GGA1-222	ENST00000489772	CHST7	Q9NS84	486 aa		12.1	□□□□□ -0.47
GGA1-222	ENST00000489772	PANK4	Q9NVE7	773 aa		12.1	□□□□□ -0.47
GGA1-222	ENST00000489772	TBC1D7	Q9P0N9	293 aa		12.1	□□□□□ -0.47
GGA1-222	ENST00000489772	CNTN3	Q9P232	1028 aa		12.1	□□□□□ -0.47
GGA1-222	ENST00000489772	CACNG4	Q9UBN1	327 aa		12.1	□□□□□ -0.47
GGA1-222	ENST00000489772	KCNH3	Q9ULD8	1083 aa		12.1	□□□□□ -0.47
GGA1-222	ENST00000489772	EXOC7	Q9UPT5	735 aa		12.1	□□□□□ -0.47
GGA1-222	ENST00000489772	PCDHB13	Q9Y5F0	798 aa		12.1	□□□□□ -0.47
GGA1-222	ENST00000489772	HCFC2	Q9Y5Z7	792 aa		12.1	□□□□□ -0.47
GGA1-222	ENST00000489772		A0A0B4J269	797 aa		12.09	□□□□□ -0.47
GGA1-222	ENST00000489772	MBTPS2	O43462	519 aa		12.09	□□□□□ -0.47
GGA1-222	ENST00000489772	LILRB3	O75022	631 aa		12.09	□□□□□ -0.47
GGA1-222	ENST00000489772	B3GAT3	O94766	335 aa		12.09	□□□□□ -0.47
GGA1-222	ENST00000489772	GCNT3	O95395	438 aa		12.09	□□□□□ -0.47
GGA1-222	ENST00000489772	CNP	P09543	421 aa	Known RBP	12.09	□□□□□ -0.47
GGA1-222	ENST00000489772	HOXB8	P17481	243 aa	Predicted RBP	12.09	□□□□□ -0.47
GGA1-222	ENST00000489772	CLCNKB	P51801	687 aa		12.09	□□□□□ -0.47
GGA1-222	ENST00000489772	DSG1	Q02413	1049 aa		12.09	□□□□□ -0.47
GGA1-222	ENST00000489772	CREM	Q03060	361 aa		12.09	□□□□□ -0.47
GGA1-222	ENST00000489772	ELAVL2	Q12926	359 aa	Known RBP	12.09	□□□□□ -0.47

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