RNA–Protein interactions for RNA: ENST00000489719.1

ABCF3-217, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 4

Gene ABCF3, Length 569 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-217ENST00000489719 MTHFRP42898 656 aa19.53■□□□□ 0.72
ABCF3-217ENST00000489719 ELMSAN1Q6PJG2 1045 aa19.53■□□□□ 0.72
ABCF3-217ENST00000489719 ZPBP2Q6X784 338 aa19.53■□□□□ 0.72
ABCF3-217ENST00000489719 RNF168Q8IYW5 571 aaPredicted RBP19.53■□□□□ 0.72
ABCF3-217ENST00000489719 LRRC15Q8TF66 581 aa19.53■□□□□ 0.72
ABCF3-217ENST00000489719 FBXL18Q96ME1 805 aa19.53■□□□□ 0.72
ABCF3-217ENST00000489719 RIPOR3Q96MK2 946 aa19.53■□□□□ 0.72
ABCF3-217ENST00000489719 NECTIN4Q96NY8 510 aa19.53■□□□□ 0.72
ABCF3-217ENST00000489719 PAAF1Q9BRP4 392 aa19.53■□□□□ 0.72
ABCF3-217ENST00000489719 RXFP1Q9HBX9 757 aa19.53■□□□□ 0.72
ABCF3-217ENST00000489719 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP19.53■□□□□ 0.72
ABCF3-217ENST00000489719 CACNG4Q9UBN1 327 aa19.53■□□□□ 0.72
ABCF3-217ENST00000489719 STK17AQ9UEE5 414 aa19.53■□□□□ 0.72
ABCF3-217ENST00000489719 SF3B1O75533 1304 aaKnown RBP eCLIP19.52■□□□□ 0.721e-7■■■■■ 172.3
ABCF3-217ENST00000489719 SMIM28A0A1B0GU29 152 aa19.52■□□□□ 0.72
ABCF3-217ENST00000489719 LOC730098B7Z3J9 87 aa19.52■□□□□ 0.72
ABCF3-217ENST00000489719 TEX28O15482 410 aa19.52■□□□□ 0.72
ABCF3-217ENST00000489719 DCXO43602 365 aa19.52■□□□□ 0.72
ABCF3-217ENST00000489719 TRAK2O60296 914 aa19.52■□□□□ 0.72
ABCF3-217ENST00000489719 BRD1O95696 1058 aa19.52■□□□□ 0.72
ABCF3-217ENST00000489719 CLCN4P51793 760 aa19.52■□□□□ 0.72
ABCF3-217ENST00000489719 NCKAP1LP55160 1127 aa19.52■□□□□ 0.72
ABCF3-217ENST00000489719 ELAVL2Q12926 359 aaKnown RBP19.52■□□□□ 0.72
ABCF3-217ENST00000489719 GLRA4Q5JXX5 417 aa19.52■□□□□ 0.72
ABCF3-217ENST00000489719 TMEM31Q5JXX7 168 aa19.52■□□□□ 0.72
ABCF3-217ENST00000489719 FOXD4L5Q5VV16 416 aaPredicted RBP19.52■□□□□ 0.72
ABCF3-217ENST00000489719 DCLRE1AQ6PJP8 1040 aa19.52■□□□□ 0.72
ABCF3-217ENST00000489719 CCDC73Q6ZRK6 1079 aa19.52■□□□□ 0.72
ABCF3-217ENST00000489719 SV2BQ7L1I2 683 aa19.52■□□□□ 0.72
ABCF3-217ENST00000489719 RNF135Q8IUD6 432 aa19.52■□□□□ 0.72
ABCF3-217ENST00000489719 GPR65Q8IYL9 337 aa19.52■□□□□ 0.72
ABCF3-217ENST00000489719 CEP120Q8N960 986 aa19.52■□□□□ 0.72
ABCF3-217ENST00000489719 FOXD4L4Q8WXT5 416 aaPredicted RBP19.52■□□□□ 0.72
ABCF3-217ENST00000489719 RIN2Q8WYP3 895 aaPredicted RBP19.52■□□□□ 0.72
ABCF3-217ENST00000489719 PANK2Q9BZ23 570 aa19.52■□□□□ 0.72
ABCF3-217ENST00000489719 SLC38A7Q9NVC3 462 aa19.52■□□□□ 0.72
ABCF3-217ENST00000489719 ANKFY1Q9P2R3 1169 aa19.52■□□□□ 0.72
ABCF3-217ENST00000489719 TFIP11Q9UBB9 837 aaKnown RBP19.52■□□□□ 0.72
ABCF3-217ENST00000489719 MORC2Q9Y6X9 1032 aaPredicted RBP19.52■□□□□ 0.72
ABCF3-217ENST00000489719 NCOR1O75376 2440 aa19.52■□□□□ 0.71
ABCF3-217ENST00000489719 B3GAT3O94766 335 aa19.51■□□□□ 0.71
ABCF3-217ENST00000489719 ABCD1P33897 745 aa19.51■□□□□ 0.71
ABCF3-217ENST00000489719 ZNF131P52739 623 aa19.51■□□□□ 0.71
ABCF3-217ENST00000489719 CREMQ03060 361 aa19.51■□□□□ 0.71
ABCF3-217ENST00000489719 NOLC1Q14978 699 aaKnown RBP eCLIP19.51■□□□□ 0.71
ABCF3-217ENST00000489719 NAB2Q15742 525 aa19.51■□□□□ 0.71
ABCF3-217ENST00000489719 FAM171A1Q5VUB5 890 aa19.51■□□□□ 0.71
ABCF3-217ENST00000489719 ALKAL1Q6UXT8 129 aa19.51■□□□□ 0.71
ABCF3-217ENST00000489719 CEP57Q86XR8 500 aa19.51■□□□□ 0.71
ABCF3-217ENST00000489719 HASPINQ8TF76 798 aa19.51■□□□□ 0.71
ABCF3-217ENST00000489719 B3GALT6Q96L58 329 aa19.51■□□□□ 0.71
ABCF3-217ENST00000489719 UROC1Q96N76 676 aa19.51■□□□□ 0.71
ABCF3-217ENST00000489719 PPP1R10Q96QC0 940 aaKnown RBP19.51■□□□□ 0.71
ABCF3-217ENST00000489719 TTPALQ9BTX7 342 aa19.51■□□□□ 0.71
ABCF3-217ENST00000489719 TBX20Q9UMR3 447 aa19.51■□□□□ 0.71
ABCF3-217ENST00000489719 K7ENM7 598 aa19.5■□□□□ 0.71
ABCF3-217ENST00000489719 TRAPPC3O43617 180 aa19.5■□□□□ 0.71
ABCF3-217ENST00000489719 KIF4AO95239 1232 aa19.5■□□□□ 0.71
ABCF3-217ENST00000489719 GLUD1P00367 558 aa19.5■□□□□ 0.71
ABCF3-217ENST00000489719 NASPP49321 788 aaPredicted RBP19.5■□□□□ 0.71
ABCF3-217ENST00000489719 LIG4P49917 911 aa19.5■□□□□ 0.71
ABCF3-217ENST00000489719 XKR4Q5GH76 650 aa19.5■□□□□ 0.71
ABCF3-217ENST00000489719 KANK3Q6NY19 840 aa19.5■□□□□ 0.71
ABCF3-217ENST00000489719 TMC5Q6UXY8 1006 aa19.5■□□□□ 0.71
ABCF3-217ENST00000489719 DYMQ7RTS9 669 aa19.5■□□□□ 0.71
ABCF3-217ENST00000489719 PALB2Q86YC2 1186 aa19.5■□□□□ 0.71
ABCF3-217ENST00000489719 SPRYD3Q8NCJ5 442 aa19.5■□□□□ 0.71
ABCF3-217ENST00000489719 LINC00301Q8NCQ3 95 aa19.5■□□□□ 0.71
ABCF3-217ENST00000489719 DDX27Q96GQ7 796 aaKnown RBP19.5■□□□□ 0.71
ABCF3-217ENST00000489719 SFXN1Q9H9B4 322 aa19.5■□□□□ 0.71
ABCF3-217ENST00000489719 FNIP2Q9P278 1114 aa19.5■□□□□ 0.71
ABCF3-217ENST00000489719 NR2E1Q9Y466 385 aa19.5■□□□□ 0.71
ABCF3-217ENST00000489719 ATG2AQ2TAZ0 1938 aa19.49■□□□□ 0.71
ABCF3-217ENST00000489719 ABLIM1O14639 778 aa19.49■□□□□ 0.71
ABCF3-217ENST00000489719 SPTLC2O15270 562 aa19.49■□□□□ 0.71
ABCF3-217ENST00000489719 GPR37L1O60883 481 aa19.49■□□□□ 0.71
ABCF3-217ENST00000489719 CLCNKBP51801 687 aa19.49■□□□□ 0.71
ABCF3-217ENST00000489719 MCL1Q07820 350 aa19.49■□□□□ 0.71
ABCF3-217ENST00000489719 KYAT1Q16773 422 aa19.49■□□□□ 0.71
ABCF3-217ENST00000489719 PDXDC1Q6P996 788 aa19.49■□□□□ 0.71
ABCF3-217ENST00000489719 KCNN1Q92952 543 aa19.49■□□□□ 0.71
ABCF3-217ENST00000489719 TSHZ2Q9NRE2 1034 aa19.49■□□□□ 0.71
ABCF3-217ENST00000489719 HNRNPDLO14979 420 aaKnown RBP19.48■□□□□ 0.71
ABCF3-217ENST00000489719 C1RP00736 705 aa19.48■□□□□ 0.71
ABCF3-217ENST00000489719 CLTAP09496 248 aa19.48■□□□□ 0.71
ABCF3-217ENST00000489719 WEE2P0C1S8 567 aa19.48■□□□□ 0.71
ABCF3-217ENST00000489719 ZSCAN22P10073 491 aaPredicted RBP19.48■□□□□ 0.71
ABCF3-217ENST00000489719 KCNE1P15382 129 aa19.48■□□□□ 0.71
ABCF3-217ENST00000489719 STAT6P42226 847 aa19.48■□□□□ 0.71
ABCF3-217ENST00000489719 UPP1Q16831 310 aa19.48■□□□□ 0.71
ABCF3-217ENST00000489719 SEZ6Q53EL9 994 aa19.48■□□□□ 0.71
ABCF3-217ENST00000489719 GLYCTKQ8IVS8 523 aa19.48■□□□□ 0.71
ABCF3-217ENST00000489719 DDX12PQ92771 950 aa19.48■□□□□ 0.71
ABCF3-217ENST00000489719 SNX27Q96L92 541 aa19.48■□□□□ 0.71
ABCF3-217ENST00000489719 LRFN3Q9BTN0 628 aa19.48■□□□□ 0.71
ABCF3-217ENST00000489719 MAN1C1Q9NR34 630 aa19.48■□□□□ 0.71
ABCF3-217ENST00000489719 MUTYHQ9UIF7 546 aa19.48■□□□□ 0.71
ABCF3-217ENST00000489719 TMEM189-UBE2V1I3L0A0 370 aa19.47■□□□□ 0.71
ABCF3-217ENST00000489719 PPP6R2O75170 966 aa19.47■□□□□ 0.71
ABCF3-217ENST00000489719 SPATA31D3P0C874 917 aa19.47■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms