RNA–Protein interactions for RNA: ENST00000489705.2

HNRNPU-211, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 3

Gene HNRNPU, Length 451 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-211ENST00000489705 GRID2IPA4D2P6 1211 aa6.8□□□□□ -1.32
HNRNPU-211ENST00000489705 OVOL3O00110 214 aa6.8□□□□□ -1.32
HNRNPU-211ENST00000489705 ADCY6O43306 1168 aa6.8□□□□□ -1.32
HNRNPU-211ENST00000489705 NCR1O76036 304 aa6.8□□□□□ -1.32
HNRNPU-211ENST00000489705 TGM1P22735 817 aa6.8□□□□□ -1.32
HNRNPU-211ENST00000489705 SRSF2Q01130 221 aaKnown RBP6.8□□□□□ -1.32
HNRNPU-211ENST00000489705 PPP3CAQ08209 521 aa6.8□□□□□ -1.32
HNRNPU-211ENST00000489705 KLF1Q13351 362 aaPredicted RBP6.8□□□□□ -1.32
HNRNPU-211ENST00000489705 AMOTL1Q8IY63 956 aa6.8□□□□□ -1.32
HNRNPU-211ENST00000489705 PQLC1Q8N2U9 271 aa6.8□□□□□ -1.32
HNRNPU-211ENST00000489705 SENP6Q9GZR1 1112 aaPredicted RBP6.8□□□□□ -1.32
HNRNPU-211ENST00000489705 MANSC1Q9H8J5 431 aa6.8□□□□□ -1.32
HNRNPU-211ENST00000489705 CYP4F11Q9HBI6 524 aa6.8□□□□□ -1.32
HNRNPU-211ENST00000489705 SPC25Q9HBM1 224 aa6.8□□□□□ -1.32
HNRNPU-211ENST00000489705 ATP11BQ9Y2G3 1177 aa6.8□□□□□ -1.32
HNRNPU-211ENST00000489705 GPR45Q9Y5Y3 372 aa6.8□□□□□ -1.32
HNRNPU-211ENST00000489705 DRGXA6NNA5 263 aa6.79□□□□□ -1.32
HNRNPU-211ENST00000489705 PPFIA2O75334 1257 aa6.79□□□□□ -1.32
HNRNPU-211ENST00000489705 USP14P54578 494 aa6.79□□□□□ -1.32
HNRNPU-211ENST00000489705 GUCY1B3Q02153 619 aa6.79□□□□□ -1.32
HNRNPU-211ENST00000489705 KRTAP15-1Q3LI76 137 aa6.79□□□□□ -1.32
HNRNPU-211ENST00000489705 ABHD17BQ5VST6 288 aa6.79□□□□□ -1.32
HNRNPU-211ENST00000489705 METRNLQ641Q3 311 aa6.79□□□□□ -1.32
HNRNPU-211ENST00000489705 CMIPQ8IY22 773 aa6.79□□□□□ -1.32
HNRNPU-211ENST00000489705 ABCF1Q8NE71 845 aaKnown RBP eCLIP6.79□□□□□ -1.32
HNRNPU-211ENST00000489705 DDX55Q8NHQ9 600 aaKnown RBP eCLIP6.79□□□□□ -1.32
HNRNPU-211ENST00000489705 SERHL2Q9H4I8 314 aa6.79□□□□□ -1.32
HNRNPU-211ENST00000489705 COL4A3Q01955 1670 aa6.79□□□□□ -1.32
HNRNPU-211ENST00000489705 CFIP05156 583 aa6.78□□□□□ -1.32
HNRNPU-211ENST00000489705 ALAS1P13196 640 aa6.78□□□□□ -1.32
HNRNPU-211ENST00000489705 ATP5JP18859 108 aa6.78□□□□□ -1.32
HNRNPU-211ENST00000489705 AGXTP21549 392 aa6.78□□□□□ -1.32
HNRNPU-211ENST00000489705 DDX6P26196 483 aaKnown RBP eCLIP6.78□□□□□ -1.325e-6■□□□□ 11.1
HNRNPU-211ENST00000489705 CANXP27824 592 aaKnown RBP6.78□□□□□ -1.32
HNRNPU-211ENST00000489705 WASP42768 502 aa6.78□□□□□ -1.32
HNRNPU-211ENST00000489705 FAM189BP81408 668 aa6.78□□□□□ -1.32
HNRNPU-211ENST00000489705 ATP2B3Q16720 1220 aa6.78□□□□□ -1.32
HNRNPU-211ENST00000489705 PDCD4Q53EL6 469 aaKnown RBP6.78□□□□□ -1.32
HNRNPU-211ENST00000489705 AFMIDQ63HM1 303 aa6.78□□□□□ -1.32
HNRNPU-211ENST00000489705 SEM1Q6ZVN7 128 aa6.78□□□□□ -1.32
HNRNPU-211ENST00000489705 RNF169Q8NCN4 708 aa6.78□□□□□ -1.32
HNRNPU-211ENST00000489705 SLC35B2Q8TB61 432 aa6.78□□□□□ -1.32
HNRNPU-211ENST00000489705 SLC9A6Q92581 669 aa6.78□□□□□ -1.32
HNRNPU-211ENST00000489705 FUBP3Q96I24 572 aaKnown RBP eCLIP6.78□□□□□ -1.32
HNRNPU-211ENST00000489705 POMCP01189 267 aa6.77□□□□□ -1.33
HNRNPU-211ENST00000489705 LMNAP02545 664 aaKnown RBP6.77□□□□□ -1.33
HNRNPU-211ENST00000489705 POU3F3P20264 500 aaPredicted RBP6.77□□□□□ -1.33
HNRNPU-211ENST00000489705 ADRA1BP35368 520 aa6.77□□□□□ -1.33
HNRNPU-211ENST00000489705 ZEB1P37275 1124 aaPredicted RBP6.77□□□□□ -1.33
HNRNPU-211ENST00000489705 CCT2P78371 535 aaKnown RBP6.77□□□□□ -1.33
HNRNPU-211ENST00000489705 KRT85P78386 507 aa6.77□□□□□ -1.33
HNRNPU-211ENST00000489705 COL10A1Q03692 680 aa6.77□□□□□ -1.33
HNRNPU-211ENST00000489705 NOMO1Q15155 1222 aa6.77□□□□□ -1.33
HNRNPU-211ENST00000489705 RNF187Q5TA31 235 aaPredicted RBP6.77□□□□□ -1.33
HNRNPU-211ENST00000489705 Q6YL49 198 aa6.77□□□□□ -1.33
HNRNPU-211ENST00000489705 LHFPL2Q6ZUX7 228 aa6.77□□□□□ -1.33
HNRNPU-211ENST00000489705 LCORLQ8N3X6 602 aa6.77□□□□□ -1.33
HNRNPU-211ENST00000489705 CPEB3Q8NE35 698 aaKnown RBP6.77□□□□□ -1.33
HNRNPU-211ENST00000489705 SUPT20HQ8NEM7 779 aa6.77□□□□□ -1.33
HNRNPU-211ENST00000489705 REPS2Q8NFH8 660 aa6.77□□□□□ -1.33
HNRNPU-211ENST00000489705 FUBP1Q96AE4 644 aaKnown RBP6.77□□□□□ -1.33
HNRNPU-211ENST00000489705 ZG16BQ96DA0 208 aa6.77□□□□□ -1.33
HNRNPU-211ENST00000489705 MRI1Q9BV20 369 aa6.77□□□□□ -1.33
HNRNPU-211ENST00000489705 USP15Q9Y4E8 981 aaPredicted RBP6.77□□□□□ -1.33
HNRNPU-211ENST00000489705 PIPSLA2A3N6 862 aa6.76□□□□□ -1.33
HNRNPU-211ENST00000489705 NDUFA10O95299 355 aa6.76□□□□□ -1.33
HNRNPU-211ENST00000489705 HKR1P10072 659 aa6.76□□□□□ -1.33
HNRNPU-211ENST00000489705 PROZP22891 400 aa6.76□□□□□ -1.33
HNRNPU-211ENST00000489705 CHN2P52757 468 aa6.76□□□□□ -1.33
HNRNPU-211ENST00000489705 SPDYE7PQ495Y7 208 aa6.76□□□□□ -1.33
HNRNPU-211ENST00000489705 HECTD2Q5U5R9 776 aa6.76□□□□□ -1.33
HNRNPU-211ENST00000489705 FAM43AQ8N2R8 423 aa6.76□□□□□ -1.33
HNRNPU-211ENST00000489705 RNPEPQ9H4A4 650 aa6.76□□□□□ -1.33
HNRNPU-211ENST00000489705 SAP30BPQ9UHR5 308 aaKnown RBP6.76□□□□□ -1.33
HNRNPU-211ENST00000489705 ZNF185O15231 689 aa6.75□□□□□ -1.33
HNRNPU-211ENST00000489705 GPR32O75388 356 aa6.75□□□□□ -1.33
HNRNPU-211ENST00000489705 CDKL5O76039 1030 aa6.75□□□□□ -1.33
HNRNPU-211ENST00000489705 FOSP01100 380 aaPredicted RBP6.75□□□□□ -1.33
HNRNPU-211ENST00000489705 RAP2AP10114 183 aa6.75□□□□□ -1.33
HNRNPU-211ENST00000489705 GSPT1P15170 499 aaKnown RBP6.75□□□□□ -1.33
HNRNPU-211ENST00000489705 GCSHP23434 173 aa6.75□□□□□ -1.33
HNRNPU-211ENST00000489705 FSTL1Q12841 308 aa6.75□□□□□ -1.33
HNRNPU-211ENST00000489705 VRK3Q8IV63 474 aa6.75□□□□□ -1.33
HNRNPU-211ENST00000489705 OR56A1Q8NGH5 318 aa6.75□□□□□ -1.33
HNRNPU-211ENST00000489705 LINC00476Q8WZB0 136 aa6.75□□□□□ -1.33
HNRNPU-211ENST00000489705 DMRT3Q9NQL9 472 aa6.75□□□□□ -1.33
HNRNPU-211ENST00000489705 KLHL11Q9NVR0 708 aa6.75□□□□□ -1.33
HNRNPU-211ENST00000489705 SYBUQ9NX95 663 aa6.75□□□□□ -1.33
HNRNPU-211ENST00000489705 SLC5A4Q9NY91 659 aa6.75□□□□□ -1.33
HNRNPU-211ENST00000489705 OSMP13725 252 aa6.74□□□□□ -1.33
HNRNPU-211ENST00000489705 NANOS3P60323 173 aaKnown RBP6.74□□□□□ -1.33
HNRNPU-211ENST00000489705 MAPKAPK5Q8IW41 473 aa6.74□□□□□ -1.33
HNRNPU-211ENST00000489705 DNAJC10Q8IXB1 793 aa6.74□□□□□ -1.33
HNRNPU-211ENST00000489705 CNTD1Q8N815 330 aa6.74□□□□□ -1.33
HNRNPU-211ENST00000489705 COG1Q8WTW3 980 aa6.74□□□□□ -1.33
HNRNPU-211ENST00000489705 BOD1Q96IK1 185 aa6.74□□□□□ -1.33
HNRNPU-211ENST00000489705 NEU1Q99519 415 aa6.74□□□□□ -1.33
HNRNPU-211ENST00000489705 C7orf25Q9BPX7 421 aa6.74□□□□□ -1.33
HNRNPU-211ENST00000489705 WDR11Q9BZH6 1224 aa6.74□□□□□ -1.33
HNRNPU-211ENST00000489705 TMEM74BQ9NUR3 256 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms