RNA–Protein interactions for RNA: ENST00000489562.5

C9orf3-221, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 646 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-221ENST00000489562 SEZ6Q53EL9 994 aa15.08■□□□□ 0
C9orf3-221ENST00000489562 TCP11X2Q5H9J9 407 aa15.08■□□□□ 0
C9orf3-221ENST00000489562 ZBTB41Q5SVQ8 909 aa15.08■□□□□ 0
C9orf3-221ENST00000489562 GAS2L3Q86XJ1 694 aa15.08■□□□□ 0
C9orf3-221ENST00000489562 NT5DC4Q86YG4 428 aa15.08■□□□□ 0
C9orf3-221ENST00000489562 RNF214Q8ND24 703 aa15.08■□□□□ 0
C9orf3-221ENST00000489562 ZSWIM2Q8NEG5 633 aa15.08■□□□□ 0
C9orf3-221ENST00000489562 BORCS6Q96GS4 357 aa15.08■□□□□ 0
C9orf3-221ENST00000489562 SNX27Q96L92 541 aa15.08■□□□□ 0
C9orf3-221ENST00000489562 FNBP1Q96RU3 617 aa15.08■□□□□ 0
C9orf3-221ENST00000489562 APOL6Q9BWW8 343 aa15.08■□□□□ 0
C9orf3-221ENST00000489562 RSAD1Q9HA92 442 aa15.08■□□□□ 0
C9orf3-221ENST00000489562 PARP2Q9UGN5 583 aa15.08■□□□□ 0
C9orf3-221ENST00000489562 LRFN2Q9ULH4 789 aa15.08■□□□□ 0
C9orf3-221ENST00000489562 DERAQ9Y315 318 aa15.08■□□□□ 0
C9orf3-221ENST00000489562 HES2Q9Y543 173 aa15.08■□□□□ 0
C9orf3-221ENST00000489562 PCDHB7Q9Y5E2 793 aa15.08■□□□□ 0
C9orf3-221ENST00000489562 TTC26A0AVF1 554 aa15.07■□□□□ 0
C9orf3-221ENST00000489562 MTIF2P46199 727 aaKnown RBP15.07■□□□□ 0
C9orf3-221ENST00000489562 VAMP7P51809 220 aa15.07■□□□□ 0
C9orf3-221ENST00000489562 AP3M2P53677 418 aa15.07■□□□□ 0
C9orf3-221ENST00000489562 SLC10A6Q3KNW5 377 aa15.07■□□□□ 0
C9orf3-221ENST00000489562 XKR4Q5GH76 650 aa15.07■□□□□ 0
C9orf3-221ENST00000489562 TMEM240Q5SV17 173 aa15.07■□□□□ 0
C9orf3-221ENST00000489562 AGMOQ6ZNB7 445 aa15.07■□□□□ 0
C9orf3-221ENST00000489562 ZNF365Q70YC5 407 aa15.07■□□□□ 0
C9orf3-221ENST00000489562 C16orf59Q7L2K0 433 aa15.07■□□□□ 0
C9orf3-221ENST00000489562 TRIM59Q8IWR1 403 aa15.07■□□□□ 0
C9orf3-221ENST00000489562 TMEM192Q8IY95 271 aa15.07■□□□□ 0
C9orf3-221ENST00000489562 PARD3BQ8TEW8 1205 aa15.07■□□□□ 0
C9orf3-221ENST00000489562 HERVK_113Q902F9 699 aa15.07■□□□□ 0
C9orf3-221ENST00000489562 RPS6KC1Q96S38 1066 aa15.07■□□□□ 0
C9orf3-221ENST00000489562 RBSNQ9H1K0 784 aa15.07■□□□□ 0
C9orf3-221ENST00000489562 HSD3B7Q9H2F3 369 aa15.07■□□□□ 0
C9orf3-221ENST00000489562 CNTN3Q9P232 1028 aa15.07■□□□□ 0
C9orf3-221ENST00000489562 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.07■□□□□ 0
C9orf3-221ENST00000489562 PDE4DIPQ5VU43 2346 aa15.06■□□□□ 0
C9orf3-221ENST00000489562 CEP290O15078 2479 aa15.06■□□□□ 0
C9orf3-221ENST00000489562 INPPL1O15357 1258 aa15.06■□□□□ 0
C9orf3-221ENST00000489562 XPOTO43592 962 aaKnown RBP15.06■□□□□ 0
C9orf3-221ENST00000489562 KCNE1P15382 129 aa15.06■□□□□ 0
C9orf3-221ENST00000489562 AKAP5P24588 427 aa15.06■□□□□ 0
C9orf3-221ENST00000489562 WDR5P61964 334 aaKnown RBP15.06■□□□□ 0
C9orf3-221ENST00000489562 MAN2A1Q16706 1144 aa15.06■□□□□ 0
C9orf3-221ENST00000489562 UVSSAQ2YD98 709 aa15.06■□□□□ 0
C9orf3-221ENST00000489562 GLB1LQ6UWU2 654 aa15.06■□□□□ 0
C9orf3-221ENST00000489562 ALKAL1Q6UXT8 129 aa15.06■□□□□ 0
C9orf3-221ENST00000489562 CREBRFQ8IUR6 639 aa15.06■□□□□ 0
C9orf3-221ENST00000489562 WDR49Q8IV35 697 aa15.06■□□□□ 0
C9orf3-221ENST00000489562 RNF169Q8NCN4 708 aa15.06■□□□□ 0
C9orf3-221ENST00000489562 CGRRF1Q99675 332 aa15.06■□□□□ 0
C9orf3-221ENST00000489562 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.06■□□□□ 01e-6■■■□□ 14.9
C9orf3-221ENST00000489562 LIMA1Q9UHB6 759 aaKnown RBP15.06■□□□□ 0
C9orf3-221ENST00000489562 C2CD2Q9Y426 696 aa15.06■□□□□ 0
C9orf3-221ENST00000489562 LRRC10BA6NIK2 292 aa15.05■□□□□ -0
C9orf3-221ENST00000489562 ZBBXA8MT70 800 aa15.05■□□□□ -0
C9orf3-221ENST00000489562 LACTBL1A8MY62 500 aa15.05■□□□□ -0
C9orf3-221ENST00000489562 N4BP1O75113 896 aaKnown RBP15.05■□□□□ -0
C9orf3-221ENST00000489562 GTF2H1P32780 548 aa15.05■□□□□ -0
C9orf3-221ENST00000489562 MAGEA10P43363 369 aaPredicted RBP15.05■□□□□ -0
C9orf3-221ENST00000489562 CLDN10P78369 228 aa15.05■□□□□ -0
C9orf3-221ENST00000489562 HSP90AA4PQ58FG1 418 aa15.05■□□□□ -0
C9orf3-221ENST00000489562 DCAF17Q5H9S7 520 aaPredicted RBP15.05■□□□□ -0
C9orf3-221ENST00000489562 TCERG1LQ5VWI1 586 aa15.05■□□□□ -0
C9orf3-221ENST00000489562 OTOP2Q7RTS6 562 aa15.05■□□□□ -0
C9orf3-221ENST00000489562 ABI1Q8IZP0 508 aa15.05■□□□□ -0
C9orf3-221ENST00000489562 CRIPAKQ8N1N5 446 aa15.05■□□□□ -0
C9orf3-221ENST00000489562 CACTINQ8WUQ7 758 aaKnown RBP15.05■□□□□ -0
C9orf3-221ENST00000489562 LPPQ93052 612 aa15.05■□□□□ -0
C9orf3-221ENST00000489562 TOP1MTQ969P6 601 aa15.05■□□□□ -0
C9orf3-221ENST00000489562 SLC35C1Q96A29 364 aa15.05■□□□□ -0
C9orf3-221ENST00000489562 CCDC127Q96BQ5 260 aa15.05■□□□□ -0
C9orf3-221ENST00000489562 FAM212AQ96EL1 285 aa15.05■□□□□ -0
C9orf3-221ENST00000489562 SLC9A7Q96T83 725 aa15.05■□□□□ -0
C9orf3-221ENST00000489562 TUBGCP2Q9BSJ2 902 aa15.05■□□□□ -0
C9orf3-221ENST00000489562 RNF39Q9H2S5 420 aa15.05■□□□□ -0
C9orf3-221ENST00000489562 PDE11AQ9HCR9 933 aa15.05■□□□□ -0
C9orf3-221ENST00000489562 SLC38A7Q9NVC3 462 aa15.05■□□□□ -0
C9orf3-221ENST00000489562 KANSL3Q9P2N6 904 aa15.05■□□□□ -0
C9orf3-221ENST00000489562 ARL5CA6NH57 179 aa15.04■□□□□ -0
C9orf3-221ENST00000489562 DLATP10515 647 aaKnown RBP15.04■□□□□ -0
C9orf3-221ENST00000489562 TNNI1P19237 187 aa15.04■□□□□ -0
C9orf3-221ENST00000489562 MLH1P40692 756 aa15.04■□□□□ -0
C9orf3-221ENST00000489562 EPHB4P54760 987 aa15.04■□□□□ -0
C9orf3-221ENST00000489562 TMEM132DQ14C87 1099 aa15.04■□□□□ -0
C9orf3-221ENST00000489562 KRT31Q15323 416 aa15.04■□□□□ -0
C9orf3-221ENST00000489562 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15.04■□□□□ -0
C9orf3-221ENST00000489562 PHOSPHO2Q8TCD6 241 aa15.04■□□□□ -0
C9orf3-221ENST00000489562 URGCPQ8TCY9 931 aa15.04■□□□□ -0
C9orf3-221ENST00000489562 KIF12Q96FN5 646 aa15.04■□□□□ -0
C9orf3-221ENST00000489562 GAD1Q99259 594 aa15.04■□□□□ -0
C9orf3-221ENST00000489562 MRPL9Q9BYD2 267 aaKnown RBP15.04■□□□□ -0
C9orf3-221ENST00000489562 TMEM117Q9H0C3 514 aa15.04■□□□□ -0
C9orf3-221ENST00000489562 KLK14Q9P0G3 267 aa15.04■□□□□ -0
C9orf3-221ENST00000489562 UBQLN1Q9UMX0 589 aaKnown RBP15.04■□□□□ -0
C9orf3-221ENST00000489562 SMIM28A0A1B0GU29 152 aa15.03■□□□□ -0
C9orf3-221ENST00000489562 LRRIQ3A6PVS8 624 aaPredicted RBP15.03■□□□□ -0
C9orf3-221ENST00000489562 MEIS3P2A8K0S8 358 aa15.03■□□□□ -0
C9orf3-221ENST00000489562 MEFVO15553 781 aaPredicted RBP15.03■□□□□ -0
C9orf3-221ENST00000489562 OFD1O75665 1012 aa15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms