RNA–Protein interactions for RNA: ENST00000489406.1

UFD1-209, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 2

Gene UFD1, Length 994 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-209ENST00000489406 TRIM16O95361 564 aa16.87■□□□□ 0.29
UFD1-209ENST00000489406 PTPN2P17706 415 aa16.87■□□□□ 0.29
UFD1-209ENST00000489406 HOXA11P31270 313 aaPredicted RBP16.87■□□□□ 0.29
UFD1-209ENST00000489406 PDE1AP54750 535 aa16.87■□□□□ 0.29
UFD1-209ENST00000489406 TRDNQ13061 729 aa16.87■□□□□ 0.29
UFD1-209ENST00000489406 PON2Q15165 354 aa16.87■□□□□ 0.29
UFD1-209ENST00000489406 TARBP2Q15633 366 aaKnown RBP16.87■□□□□ 0.29
UFD1-209ENST00000489406 MTERF2Q49AM1 385 aa16.87■□□□□ 0.29
UFD1-209ENST00000489406 C1orf228Q6PIY5 440 aa16.87■□□□□ 0.29
UFD1-209ENST00000489406 CWC27Q6UX04 472 aaKnown RBP16.87■□□□□ 0.29
UFD1-209ENST00000489406 HEATR3Q7Z4Q2 680 aa16.87■□□□□ 0.29
UFD1-209ENST00000489406 TTC8Q8TAM2 541 aa16.87■□□□□ 0.29
UFD1-209ENST00000489406 FAM200AQ8TCP9 573 aa16.87■□□□□ 0.29
UFD1-209ENST00000489406 HASPINQ8TF76 798 aa16.87■□□□□ 0.29
UFD1-209ENST00000489406 SMARCD2Q92925 531 aa16.87■□□□□ 0.29
UFD1-209ENST00000489406 ZSWIM3Q96MP5 696 aa16.87■□□□□ 0.29
UFD1-209ENST00000489406 DSCC1Q9BVC3 393 aa16.87■□□□□ 0.29
UFD1-209ENST00000489406 C8orf33Q9H7E9 229 aaPredicted RBP16.87■□□□□ 0.29
UFD1-209ENST00000489406 CACNG4Q9UBN1 327 aa16.87■□□□□ 0.29
UFD1-209ENST00000489406 HES2Q9Y543 173 aa16.87■□□□□ 0.29
UFD1-209ENST00000489406 IPPQ9Y573 584 aa16.87■□□□□ 0.29
UFD1-209ENST00000489406 SF3B1O75533 1304 aaKnown RBP eCLIP16.87■□□□□ 0.291e-6■■■■■ 79.7
UFD1-209ENST00000489406 PDCD11Q14690 1871 aaKnown RBP16.86■□□□□ 0.29
UFD1-209ENST00000489406 ZNF462Q96JM2 2506 aa16.86■□□□□ 0.29
UFD1-209ENST00000489406 IGLV3-22A0A075B6J6 115 aa16.86■□□□□ 0.29
UFD1-209ENST00000489406 WDR27A2RRH5 827 aa16.86■□□□□ 0.29
UFD1-209ENST00000489406 PCNX2A6NKB5 2137 aa16.86■□□□□ 0.29
UFD1-209ENST00000489406 SPECC1L-ADORA2AF8WAN1 911 aa16.86■□□□□ 0.29
UFD1-209ENST00000489406 FOSP01100 380 aaPredicted RBP16.86■□□□□ 0.29
UFD1-209ENST00000489406 OR1D2P34982 312 aa16.86■□□□□ 0.29
UFD1-209ENST00000489406 RDXP35241 583 aaKnown RBP16.86■□□□□ 0.29
UFD1-209ENST00000489406 SREBF1P36956 1147 aa16.86■□□□□ 0.29
UFD1-209ENST00000489406 CCINQ13939 588 aa16.86■□□□□ 0.29
UFD1-209ENST00000489406 RAB33AQ14088 237 aa16.86■□□□□ 0.29
UFD1-209ENST00000489406 UGCGQ16739 394 aa16.86■□□□□ 0.29
UFD1-209ENST00000489406 PRSS36Q5K4E3 855 aa16.86■□□□□ 0.29
UFD1-209ENST00000489406 ZNF605Q86T29 641 aa16.86■□□□□ 0.29
UFD1-209ENST00000489406 MFSD6LQ8IWD5 586 aa16.86■□□□□ 0.29
UFD1-209ENST00000489406 CNNM3Q8NE01 707 aa16.86■□□□□ 0.29
UFD1-209ENST00000489406 CORO1BQ9BR76 489 aa16.86■□□□□ 0.29
UFD1-209ENST00000489406 SH2D3AQ9BRG2 576 aa16.86■□□□□ 0.29
UFD1-209ENST00000489406 LZTS2Q9BRK4 669 aa16.86■□□□□ 0.29
UFD1-209ENST00000489406 IFT122Q9HBG6 1241 aa16.86■□□□□ 0.29
UFD1-209ENST00000489406 SLC8A2Q9UPR5 921 aa16.86■□□□□ 0.29
UFD1-209ENST00000489406 RAI2Q9Y5P3 530 aa16.86■□□□□ 0.29
UFD1-209ENST00000489406 NCANO14594 1321 aa16.86■□□□□ 0.29
UFD1-209ENST00000489406 ACACAQ13085 2346 aa16.86■□□□□ 0.29
UFD1-209ENST00000489406 TDRD15B5MCY1 1934 aaKnown RBP16.86■□□□□ 0.29
UFD1-209ENST00000489406 EML5Q05BV3 1969 aa16.86■□□□□ 0.29
UFD1-209ENST00000489406 IRX4P78413 519 aa16.85■□□□□ 0.29
UFD1-209ENST00000489406 C20orf194Q5TEA3 1177 aa16.85■□□□□ 0.29
UFD1-209ENST00000489406 SYNPOQ8N3V7 929 aa16.85■□□□□ 0.29
UFD1-209ENST00000489406 CCDC82Q8N4S0 544 aa16.85■□□□□ 0.29
UFD1-209ENST00000489406 MDM1Q8TC05 714 aa16.85■□□□□ 0.29
UFD1-209ENST00000489406 HNRNPABQ99729 332 aaKnown RBP16.85■□□□□ 0.29
UFD1-209ENST00000489406 EIF2AQ9BY44 585 aaKnown RBP16.85■□□□□ 0.29
UFD1-209ENST00000489406 SCUBE2Q9NQ36 999 aa16.85■□□□□ 0.29
UFD1-209ENST00000489406 APC2O95996 2303 aa16.85■□□□□ 0.29
UFD1-209ENST00000489406 IGKV6-21A0A0C4DH24 114 aa16.84■□□□□ 0.29
UFD1-209ENST00000489406 MYBPHLA2RUH7 354 aa16.84■□□□□ 0.29
UFD1-209ENST00000489406 TMEM150BA6NC51 233 aa16.84■□□□□ 0.29
UFD1-209ENST00000489406 MEFVO15553 781 aaPredicted RBP16.84■□□□□ 0.29
UFD1-209ENST00000489406 CTHP32929 405 aa16.84■□□□□ 0.29
UFD1-209ENST00000489406 CCR2P41597 374 aa16.84■□□□□ 0.29
UFD1-209ENST00000489406 HSP90AA2PQ14568 343 aaPredicted RBP16.84■□□□□ 0.29
UFD1-209ENST00000489406 SART3Q15020 963 aaKnown RBP16.84■□□□□ 0.29
UFD1-209ENST00000489406 YAF2Q8IY57 180 aa16.84■□□□□ 0.29
UFD1-209ENST00000489406 ZNF654Q8IZM8 581 aa16.84■□□□□ 0.29
UFD1-209ENST00000489406 SLC39A7Q92504 469 aa16.84■□□□□ 0.29
UFD1-209ENST00000489406 CRELD1Q96HD1 420 aa16.84■□□□□ 0.29
UFD1-209ENST00000489406 MAP3K14Q99558 947 aa16.84■□□□□ 0.29
UFD1-209ENST00000489406 PAAF1Q9BRP4 392 aa16.84■□□□□ 0.29
UFD1-209ENST00000489406 MINDY3Q9H8M7 445 aa16.84■□□□□ 0.29
UFD1-209ENST00000489406 POLR3BQ9NW08 1133 aaPredicted RBP16.84■□□□□ 0.29
UFD1-209ENST00000489406 SEPT9Q9UHD8 586 aaPredicted RBP16.84■□□□□ 0.29
UFD1-209ENST00000489406 HEPACAM2A8MVW5 462 aa16.83■□□□□ 0.28
UFD1-209ENST00000489406 WDR64B1ANS9 1081 aa16.83■□□□□ 0.28
UFD1-209ENST00000489406 GNAQP50148 359 aa16.83■□□□□ 0.28
UFD1-209ENST00000489406 RTL10Q7L3V2 364 aa16.83■□□□□ 0.28
UFD1-209ENST00000489406 RAB44Q7Z6P3 723 aaPredicted RBP16.83■□□□□ 0.28
UFD1-209ENST00000489406 RALGPS2Q86X27 583 aaPredicted RBP16.83■□□□□ 0.28
UFD1-209ENST00000489406 CFAP46Q8IYW2 2715 aa16.83■□□□□ 0.28
UFD1-209ENST00000489406 UBL7Q96S82 380 aaPredicted RBP16.83■□□□□ 0.28
UFD1-209ENST00000489406 RIC8AQ9NPQ8 531 aa16.83■□□□□ 0.28
UFD1-209ENST00000489406 DISC1Q9NRI5 854 aa16.83■□□□□ 0.28
UFD1-209ENST00000489406 ZNF197O14709 1029 aa16.82■□□□□ 0.28
UFD1-209ENST00000489406 DDAH1O94760 285 aa16.82■□□□□ 0.28
UFD1-209ENST00000489406 LRG1P02750 347 aa16.82■□□□□ 0.28
UFD1-209ENST00000489406 GBP1P32455 592 aa16.82■□□□□ 0.28
UFD1-209ENST00000489406 MAPK8P45983 427 aa16.82■□□□□ 0.28
UFD1-209ENST00000489406 FAM193AP78312 1265 aa16.82■□□□□ 0.28
UFD1-209ENST00000489406 PDZD4Q76G19 769 aaPredicted RBP16.82■□□□□ 0.28
UFD1-209ENST00000489406 GSTCDQ8NEC7 633 aa16.82■□□□□ 0.28
UFD1-209ENST00000489406 ZSCAN18Q8TBC5 510 aaPredicted RBP16.82■□□□□ 0.28
UFD1-209ENST00000489406 CEP89Q96ST8 783 aa16.82■□□□□ 0.28
UFD1-209ENST00000489406 ZBTB47Q9UFB7 747 aaPredicted RBP16.82■□□□□ 0.28
UFD1-209ENST00000489406 NUP205Q92621 2012 aa16.81■□□□□ 0.28
UFD1-209ENST00000489406 RXRAP19793 462 aa16.81■□□□□ 0.28
UFD1-209ENST00000489406 ANKRD45Q5TZF3 282 aa16.81■□□□□ 0.28
UFD1-209ENST00000489406 TYW1BQ6NUM6 668 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms