RNA–Protein interactions for RNA: ENST00000489028.1

RFC4-213, Transcript of replication factor C subunit 4, humanhuman

TSL 3

Gene RFC4, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-213ENST00000489028 XPOTO43592 962 aaKnown RBP4.98□□□□□ -1.61
RFC4-213ENST00000489028 ENDOD1O94919 500 aa4.98□□□□□ -1.61
RFC4-213ENST00000489028 RAP2AP10114 183 aa4.98□□□□□ -1.61
RFC4-213ENST00000489028 EDNRBP24530 442 aa4.98□□□□□ -1.61
RFC4-213ENST00000489028 WASP42768 502 aa4.98□□□□□ -1.61
RFC4-213ENST00000489028 CHN2P52757 468 aa4.98□□□□□ -1.61
RFC4-213ENST00000489028 PER3P56645 1201 aa4.98□□□□□ -1.61
RFC4-213ENST00000489028 CLRN1P58418 232 aa4.98□□□□□ -1.61
RFC4-213ENST00000489028 RAP2BP61225 183 aa4.98□□□□□ -1.61
RFC4-213ENST00000489028 ATP8B2P98198 1209 aa4.98□□□□□ -1.61
RFC4-213ENST00000489028 MTM1Q13496 603 aa4.98□□□□□ -1.61
RFC4-213ENST00000489028 PDCD4Q53EL6 469 aaKnown RBP4.98□□□□□ -1.61
RFC4-213ENST00000489028 FAM102AQ5T9C2 384 aaPredicted RBP4.98□□□□□ -1.61
RFC4-213ENST00000489028 FAM180AQ6UWF9 173 aa4.98□□□□□ -1.61
RFC4-213ENST00000489028 MRGPREQ86SM8 312 aa4.98□□□□□ -1.61
RFC4-213ENST00000489028 CCHCR1Q8TD31 782 aa4.98□□□□□ -1.61
RFC4-213ENST00000489028 SSH1Q8WYL5 1049 aa4.98□□□□□ -1.61
RFC4-213ENST00000489028 SORCS2Q96PQ0 1159 aa4.98□□□□□ -1.61
RFC4-213ENST00000489028 SMAD5Q99717 465 aaKnown RBP4.98□□□□□ -1.61
RFC4-213ENST00000489028 MRI1Q9BV20 369 aa4.98□□□□□ -1.61
RFC4-213ENST00000489028 MLST8Q9BVC4 326 aa4.98□□□□□ -1.61
RFC4-213ENST00000489028 SENP6Q9GZR1 1112 aaPredicted RBP4.98□□□□□ -1.61
RFC4-213ENST00000489028 TRPM5Q9NZQ8 1165 aa4.98□□□□□ -1.61
RFC4-213ENST00000489028 POGKQ9P215 609 aa4.98□□□□□ -1.61
RFC4-213ENST00000489028 SERPINB13Q9UIV8 391 aa4.98□□□□□ -1.61
RFC4-213ENST00000489028 INTUQ9ULD6 942 aa4.98□□□□□ -1.61
RFC4-213ENST00000489028 LIMCH1Q9UPQ0 1083 aa4.98□□□□□ -1.61
RFC4-213ENST00000489028 CLCA2Q9UQC9 943 aa4.98□□□□□ -1.61
RFC4-213ENST00000489028 LOC105371045A0A1W2PR82 267 aa4.97□□□□□ -1.61
RFC4-213ENST00000489028 ANKRD62A6NC57 917 aa4.97□□□□□ -1.61
RFC4-213ENST00000489028 KLHL33A6NCF5 533 aa4.97□□□□□ -1.61
RFC4-213ENST00000489028 DRGXA6NNA5 263 aa4.97□□□□□ -1.61
RFC4-213ENST00000489028 FAM171A2A8MVW0 826 aa4.97□□□□□ -1.61
RFC4-213ENST00000489028 NCR1O76036 304 aa4.97□□□□□ -1.61
RFC4-213ENST00000489028 SNRPA1P09661 255 aaKnown RBP4.97□□□□□ -1.61
RFC4-213ENST00000489028 MCM7P33993 719 aa4.97□□□□□ -1.61
RFC4-213ENST00000489028 TARDBPQ13148 414 aaKnown RBP eCLIP4.97□□□□□ -1.611e-6■■■■□ 22.1
RFC4-213ENST00000489028 FHL2Q14192 279 aa4.97□□□□□ -1.61
RFC4-213ENST00000489028 PTPN21Q16825 1174 aa4.97□□□□□ -1.61
RFC4-213ENST00000489028 C3orf36Q3SXR2 165 aa4.97□□□□□ -1.61
RFC4-213ENST00000489028 BRDTQ58F21 947 aaPredicted RBP4.97□□□□□ -1.61
RFC4-213ENST00000489028 GJC2Q5T442 439 aaPredicted RBP4.97□□□□□ -1.61
RFC4-213ENST00000489028 ATXN7L2Q5T6C5 722 aaPredicted RBP4.97□□□□□ -1.61
RFC4-213ENST00000489028 GDF7Q7Z4P5 450 aa4.97□□□□□ -1.61
RFC4-213ENST00000489028 NEU4Q8WWR8 484 aaPredicted RBP4.97□□□□□ -1.61
RFC4-213ENST00000489028 LENG9Q96B70 501 aa4.97□□□□□ -1.61
RFC4-213ENST00000489028 SLC46A2Q9BY10 475 aa4.97□□□□□ -1.61
RFC4-213ENST00000489028 FBXO34Q9NWN3 711 aa4.97□□□□□ -1.61
RFC4-213ENST00000489028 RUVBL1Q9Y265 456 aaKnown RBP4.97□□□□□ -1.61
RFC4-213ENST00000489028 IPPQ9Y573 584 aa4.97□□□□□ -1.61
RFC4-213ENST00000489028 CCDC78A2IDD5 438 aa4.96□□□□□ -1.62
RFC4-213ENST00000489028 HTRA2O43464 458 aaPredicted RBP4.96□□□□□ -1.62
RFC4-213ENST00000489028 LPXNO60711 386 aa4.96□□□□□ -1.62
RFC4-213ENST00000489028 GPR32O75388 356 aa4.96□□□□□ -1.62
RFC4-213ENST00000489028 RECQL4O94761 1208 aa4.96□□□□□ -1.62
RFC4-213ENST00000489028 PRSS23O95084 383 aa4.96□□□□□ -1.62
RFC4-213ENST00000489028 ZRANB2O95218 330 aaKnown RBP eCLIP4.96□□□□□ -1.62
RFC4-213ENST00000489028 ADH4P08319 380 aa4.96□□□□□ -1.62
RFC4-213ENST00000489028 IL2RBP14784 551 aa4.96□□□□□ -1.62
RFC4-213ENST00000489028 ATP5JP18859 108 aa4.96□□□□□ -1.62
RFC4-213ENST00000489028 KRT4P19013 534 aa4.96□□□□□ -1.62
RFC4-213ENST00000489028 MAKP20794 623 aa4.96□□□□□ -1.62
RFC4-213ENST00000489028 SLC6A2P23975 617 aa4.96□□□□□ -1.62
RFC4-213ENST00000489028 KRT85P78386 507 aa4.96□□□□□ -1.62
RFC4-213ENST00000489028 IL10RAQ13651 578 aa4.96□□□□□ -1.62
RFC4-213ENST00000489028 RRP12Q5JTH9 1297 aaKnown RBP4.96□□□□□ -1.62
RFC4-213ENST00000489028 OTUD7BQ6GQQ9 843 aa4.96□□□□□ -1.62
RFC4-213ENST00000489028 LRRC55Q6ZSA7 311 aa4.96□□□□□ -1.62
RFC4-213ENST00000489028 USP51Q70EK9 711 aa4.96□□□□□ -1.62
RFC4-213ENST00000489028 RHOT1Q8IXI2 618 aa4.96□□□□□ -1.62
RFC4-213ENST00000489028 DCBLD1Q8N8Z6 715 aa4.96□□□□□ -1.62
RFC4-213ENST00000489028 ZFP28Q8NHY6 868 aa4.96□□□□□ -1.62
RFC4-213ENST00000489028 CASKIN2Q8WXE0 1202 aa4.96□□□□□ -1.62
RFC4-213ENST00000489028 PHACTR3Q96KR7 559 aa4.96□□□□□ -1.62
RFC4-213ENST00000489028 BRINP2Q9C0B6 783 aa4.96□□□□□ -1.62
RFC4-213ENST00000489028 FZD1Q9UP38 647 aa4.96□□□□□ -1.62
RFC4-213ENST00000489028 PCDHA13Q9Y5I0 950 aa4.96□□□□□ -1.62
RFC4-213ENST00000489028 HS3ST4Q9Y661 456 aa4.96□□□□□ -1.62
RFC4-213ENST00000489028 CENPVL1A0A0U1RR11 272 aa4.95□□□□□ -1.62
RFC4-213ENST00000489028 CCDC154A6NI56 674 aa4.95□□□□□ -1.62
RFC4-213ENST00000489028 DDCP20711 480 aa4.95□□□□□ -1.62
RFC4-213ENST00000489028 MGAT1P26572 445 aa4.95□□□□□ -1.62
RFC4-213ENST00000489028 KIF23Q02241 960 aaPredicted RBP4.95□□□□□ -1.62
RFC4-213ENST00000489028 AGAP9Q5VTM2 703 aa4.95□□□□□ -1.62
RFC4-213ENST00000489028 ZNF529Q6P280 563 aa4.95□□□□□ -1.62
RFC4-213ENST00000489028 SEM1Q6ZVN7 128 aa4.95□□□□□ -1.62
RFC4-213ENST00000489028 MED25Q71SY5 747 aa4.95□□□□□ -1.62
RFC4-213ENST00000489028 UBE3BQ7Z3V4 1068 aa4.95□□□□□ -1.62
RFC4-213ENST00000489028 LDLRAD3Q86YD5 345 aa4.95□□□□□ -1.62
RFC4-213ENST00000489028 ABCF1Q8NE71 845 aaKnown RBP eCLIP4.95□□□□□ -1.62
RFC4-213ENST00000489028 ZCRB1Q8TBF4 217 aaKnown RBP4.95□□□□□ -1.62
RFC4-213ENST00000489028 HAS1Q92839 578 aa4.95□□□□□ -1.62
RFC4-213ENST00000489028 COA7Q96BR5 231 aa4.95□□□□□ -1.62
RFC4-213ENST00000489028 FAM193BQ96PV7 902 aaPredicted RBP4.95□□□□□ -1.62
RFC4-213ENST00000489028 DCLRE1CQ96SD1 692 aaKnown RBP4.95□□□□□ -1.62
RFC4-213ENST00000489028 C7orf25Q9BPX7 421 aa4.95□□□□□ -1.62
RFC4-213ENST00000489028 MRIQ9BWK5 157 aa4.95□□□□□ -1.62
RFC4-213ENST00000489028 SLC13A1Q9BZW2 595 aa4.95□□□□□ -1.62
RFC4-213ENST00000489028 AKIP1Q9NQ31 210 aa4.95□□□□□ -1.62
RFC4-213ENST00000489028 HOMER2Q9NSB8 354 aa4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms