RNA–Protein interactions for RNA: ENST00000488727.5

CCM2-216, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 1,719 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-216ENST00000488727 ZSCAN12O43309 604 aa21.05■□□□□ 0.96
CCM2-216ENST00000488727 MCF2P10911 925 aa21.05■□□□□ 0.96
CCM2-216ENST00000488727 HARSP12081 509 aaKnown RBP21.05■□□□□ 0.96
CCM2-216ENST00000488727 ATP2A2P16615 1042 aaKnown RBP21.05■□□□□ 0.96
CCM2-216ENST00000488727 PTPN21Q16825 1174 aa21.05■□□□□ 0.96
CCM2-216ENST00000488727 COBLL1Q53SF7 1204 aa21.05■□□□□ 0.96
CCM2-216ENST00000488727 FAM117BQ6P1L5 589 aa21.05■□□□□ 0.96
CCM2-216ENST00000488727 NPAS4Q8IUM7 802 aa21.05■□□□□ 0.96
CCM2-216ENST00000488727 RNF169Q8NCN4 708 aa21.05■□□□□ 0.96
CCM2-216ENST00000488727 ZNF592Q92610 1267 aa21.05■□□□□ 0.96
CCM2-216ENST00000488727 FNDC1Q4ZHG4 1894 aaPredicted RBP21.05■□□□□ 0.96
CCM2-216ENST00000488727 A0A0B4J269 797 aa21.04■□□□□ 0.96
CCM2-216ENST00000488727 AKR1B15C9JRZ8 316 aaPredicted RBP21.04■□□□□ 0.96
CCM2-216ENST00000488727 EOMESO95936 686 aa21.04■□□□□ 0.96
CCM2-216ENST00000488727 SKIP12755 728 aa21.04■□□□□ 0.96
CCM2-216ENST00000488727 PPP1R2P41236 205 aa21.04■□□□□ 0.96
CCM2-216ENST00000488727 MATR3P43243 847 aaKnown RBP eCLIP21.04■□□□□ 0.96
CCM2-216ENST00000488727 GOLGA8FQ08AF8 430 aa21.04■□□□□ 0.96
CCM2-216ENST00000488727 GOLGA8DPQ0D2H9 430 aa21.04■□□□□ 0.96
CCM2-216ENST00000488727 STIM1Q13586 685 aa21.04■□□□□ 0.96
CCM2-216ENST00000488727 KRT31Q15323 416 aa21.04■□□□□ 0.96
CCM2-216ENST00000488727 ANKRD20A12PQ8NF67 263 aa21.04■□□□□ 0.96
CCM2-216ENST00000488727 PHOSPHO2Q8TCD6 241 aa21.04■□□□□ 0.96
CCM2-216ENST00000488727 ANKRD7Q92527 254 aa21.04■□□□□ 0.96
CCM2-216ENST00000488727 CBWD1Q9BRT8 395 aa21.04■□□□□ 0.96
CCM2-216ENST00000488727 RNF19AQ9NV58 838 aa21.04■□□□□ 0.96
CCM2-216ENST00000488727 PCDHB7Q9Y5E2 793 aa21.04■□□□□ 0.96
CCM2-216ENST00000488727 GOLGA6L9A6NEM1 432 aa21.04■□□□□ 0.96
CCM2-216ENST00000488727 GRXCR1A8MXD5 290 aa21.04■□□□□ 0.96
CCM2-216ENST00000488727 FAM189A1O60320 539 aa21.04■□□□□ 0.96
CCM2-216ENST00000488727 GJB5O95377 273 aa21.04■□□□□ 0.96
CCM2-216ENST00000488727 FGFR1P11362 822 aa21.04■□□□□ 0.96
CCM2-216ENST00000488727 GATMP50440 423 aa21.04■□□□□ 0.96
CCM2-216ENST00000488727 SEZ6Q53EL9 994 aa21.04■□□□□ 0.96
CCM2-216ENST00000488727 AGMOQ6ZNB7 445 aa21.04■□□□□ 0.96
CCM2-216ENST00000488727 HERC6Q8IVU3 1022 aa21.04■□□□□ 0.96
CCM2-216ENST00000488727 REXO1L1PQ8IX06 675 aa21.04■□□□□ 0.96
CCM2-216ENST00000488727 TMEM192Q8IY95 271 aa21.04■□□□□ 0.96
CCM2-216ENST00000488727 THNSL1Q8IYQ7 743 aa21.04■□□□□ 0.96
CCM2-216ENST00000488727 APOL6Q9BWW8 343 aa21.04■□□□□ 0.96
CCM2-216ENST00000488727 NAA15Q9BXJ9 866 aaKnown RBP21.04■□□□□ 0.96
CCM2-216ENST00000488727 AGPAT3Q9NRZ7 376 aa21.04■□□□□ 0.96
CCM2-216ENST00000488727 LRFN2Q9ULH4 789 aa21.04■□□□□ 0.96
CCM2-216ENST00000488727 TRIP11Q15643 1979 aa21.03■□□□□ 0.96
CCM2-216ENST00000488727 STAG3L1P0CL83 205 aa21.03■□□□□ 0.96
CCM2-216ENST00000488727 AKAP5P24588 427 aa21.03■□□□□ 0.96
CCM2-216ENST00000488727 COPB1P53618 953 aaKnown RBP21.03■□□□□ 0.96
CCM2-216ENST00000488727 OSTNP61366 133 aa21.03■□□□□ 0.96
CCM2-216ENST00000488727 TCP11X2Q5H9J9 407 aa21.03■□□□□ 0.96
CCM2-216ENST00000488727 ZBTB41Q5SVQ8 909 aa21.03■□□□□ 0.96
CCM2-216ENST00000488727 SLFN12LQ6IEE8 588 aa21.03■□□□□ 0.96
CCM2-216ENST00000488727 ZSWIM2Q8NEG5 633 aa21.03■□□□□ 0.96
CCM2-216ENST00000488727 POMGNT1Q8WZA1 660 aa21.03■□□□□ 0.96
CCM2-216ENST00000488727 TSC1Q92574 1164 aa21.03■□□□□ 0.96
CCM2-216ENST00000488727 MSTO1Q9BUK6 570 aa21.03■□□□□ 0.96
CCM2-216ENST00000488727 SNTG2Q9NY99 539 aa21.03■□□□□ 0.96
CCM2-216ENST00000488727 CITO14578 2027 aa21.03■□□□□ 0.96
CCM2-216ENST00000488727 KCNJ18B7U540 433 aa21.02■□□□□ 0.96
CCM2-216ENST00000488727 CLIC2O15247 247 aa21.02■□□□□ 0.96
CCM2-216ENST00000488727 DGKIO75912 1065 aa21.02■□□□□ 0.96
CCM2-216ENST00000488727 KIF20AO95235 890 aa21.02■□□□□ 0.96
CCM2-216ENST00000488727 FECHP22830 423 aa21.02■□□□□ 0.96
CCM2-216ENST00000488727 ADKP55263 362 aaKnown RBP21.02■□□□□ 0.96
CCM2-216ENST00000488727 KCNJ12Q14500 433 aa21.02■□□□□ 0.96
CCM2-216ENST00000488727 CLLU1OSQ5K130 101 aa21.02■□□□□ 0.96
CCM2-216ENST00000488727 APBB1IPQ7Z5R6 666 aaPredicted RBP21.02■□□□□ 0.96
CCM2-216ENST00000488727 PPFIBP1Q86W92 1011 aa21.02■□□□□ 0.96
CCM2-216ENST00000488727 NOC3LQ8WTT2 800 aaKnown RBP21.02■□□□□ 0.96
CCM2-216ENST00000488727 DHTKD1Q96HY7 919 aaPredicted RBP21.02■□□□□ 0.96
CCM2-216ENST00000488727 SEMA6BQ9H3T3 888 aa21.02■□□□□ 0.96
CCM2-216ENST00000488727 L2HGDHQ9H9P8 463 aa21.02■□□□□ 0.96
CCM2-216ENST00000488727 RC3H2Q9HBD1 1191 aaKnown RBP21.02■□□□□ 0.96
CCM2-216ENST00000488727 TYW1Q9NV66 732 aaKnown RBP21.02■□□□□ 0.96
CCM2-216ENST00000488727 PDXKO00764 312 aa21.01■□□□□ 0.95
CCM2-216ENST00000488727 PSMA7O14818 248 aa21.01■□□□□ 0.95
CCM2-216ENST00000488727 ITGA4P13612 1032 aa21.01■□□□□ 0.95
CCM2-216ENST00000488727 GARTP22102 1010 aa21.01■□□□□ 0.95
CCM2-216ENST00000488727 TNFSF9P41273 254 aa21.01■□□□□ 0.95
CCM2-216ENST00000488727 GRM5P41594 1212 aa21.01■□□□□ 0.95
CCM2-216ENST00000488727 ETF1P62495 437 aaKnown RBP21.01■□□□□ 0.95
CCM2-216ENST00000488727 TRIM14Q14142 442 aa21.01■□□□□ 0.95
CCM2-216ENST00000488727 ZCWPW2Q504Y3 356 aa21.01■□□□□ 0.95
CCM2-216ENST00000488727 HS2ST1Q7LGA3 356 aa21.01■□□□□ 0.95
CCM2-216ENST00000488727 PGBD4Q96DM1 585 aa21.01■□□□□ 0.95
CCM2-216ENST00000488727 PCIF1Q9H4Z3 704 aa21.01■□□□□ 0.95
CCM2-216ENST00000488727 THAP9Q9H5L6 903 aa21.01■□□□□ 0.95
CCM2-216ENST00000488727 AGO2Q9UKV8 859 aaKnown RBP21.01■□□□□ 0.95
CCM2-216ENST00000488727 PPP2R2CQ9Y2T4 447 aa21.01■□□□□ 0.95
CCM2-216ENST00000488727 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP21.01■□□□□ 0.95
CCM2-216ENST00000488727 TRIOBPQ9H2D6 2365 aa21.01■□□□□ 0.95
CCM2-216ENST00000488727 OGTO15294 1046 aa21.01■□□□□ 0.95
CCM2-216ENST00000488727 MEFVO15553 781 aaPredicted RBP21.01■□□□□ 0.95
CCM2-216ENST00000488727 MFAP3LO75121 409 aa21.01■□□□□ 0.95
CCM2-216ENST00000488727 RECQL4O94761 1208 aa21.01■□□□□ 0.95
CCM2-216ENST00000488727 EEF1GP26641 437 aaKnown RBP21.01■□□□□ 0.95
CCM2-216ENST00000488727 RABGGTBP53611 331 aa21.01■□□□□ 0.95
CCM2-216ENST00000488727 PMS1P54277 932 aaKnown RBP21.01■□□□□ 0.95
CCM2-216ENST00000488727 HTRA4P83105 476 aaPredicted RBP21.01■□□□□ 0.95
CCM2-216ENST00000488727 ZNF689Q96CS4 500 aaPredicted RBP21.01■□□□□ 0.95
CCM2-216ENST00000488727 SAAL1Q96ER3 474 aa21.01■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms