RNA–Protein interactions for RNA: ENST00000488494.5

ITGB1-215, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-215ENST00000488494 KCNG1Q9UIX4 513 aa19.45■□□□□ 0.7
ITGB1-215ENST00000488494 SSX2IPQ9Y2D8 614 aa19.45■□□□□ 0.7
ITGB1-215ENST00000488494 PLXNA3P51805 1871 aa19.44■□□□□ 0.7
ITGB1-215ENST00000488494 LOC730098B7Z3J9 87 aa19.44■□□□□ 0.7
ITGB1-215ENST00000488494 H0YCG3 227 aa19.44■□□□□ 0.7
ITGB1-215ENST00000488494 TADA2AO75478 443 aa19.44■□□□□ 0.7
ITGB1-215ENST00000488494 TOM1L1O75674 476 aa19.44■□□□□ 0.7
ITGB1-215ENST00000488494 BRD1O95696 1058 aa19.44■□□□□ 0.7
ITGB1-215ENST00000488494 ADH1AP07327 375 aa19.44■□□□□ 0.7
ITGB1-215ENST00000488494 WEE2P0C1S8 567 aa19.44■□□□□ 0.7
ITGB1-215ENST00000488494 SP100P23497 879 aaPredicted RBP19.44■□□□□ 0.7
ITGB1-215ENST00000488494 TXLNAP40222 546 aa19.44■□□□□ 0.7
ITGB1-215ENST00000488494 ZNF131P52739 623 aa19.44■□□□□ 0.7
ITGB1-215ENST00000488494 USP41Q3LFD5 358 aa19.44■□□□□ 0.7
ITGB1-215ENST00000488494 KIAA0319Q5VV43 1072 aa19.44■□□□□ 0.7
ITGB1-215ENST00000488494 KANK3Q6NY19 840 aa19.44■□□□□ 0.7
ITGB1-215ENST00000488494 RNF135Q8IUD6 432 aa19.44■□□□□ 0.7
ITGB1-215ENST00000488494 RIN2Q8WYP3 895 aaPredicted RBP19.44■□□□□ 0.7
ITGB1-215ENST00000488494 BICD1Q96G01 975 aa19.44■□□□□ 0.7
ITGB1-215ENST00000488494 ZBTB45Q96K62 511 aaPredicted RBP19.44■□□□□ 0.7
ITGB1-215ENST00000488494 SNX27Q96L92 541 aa19.44■□□□□ 0.7
ITGB1-215ENST00000488494 ZHX3Q9H4I2 956 aa19.44■□□□□ 0.7
ITGB1-215ENST00000488494 SFXN1Q9H9B4 322 aa19.44■□□□□ 0.7
ITGB1-215ENST00000488494 PARVGQ9HBI0 331 aa19.44■□□□□ 0.7
ITGB1-215ENST00000488494 CHST7Q9NS84 486 aa19.44■□□□□ 0.7
ITGB1-215ENST00000488494 MUTYHQ9UIF7 546 aa19.44■□□□□ 0.7
ITGB1-215ENST00000488494 ALADP13716 330 aa19.43■□□□□ 0.7
ITGB1-215ENST00000488494 TMEM31Q5JXX7 168 aa19.43■□□□□ 0.7
ITGB1-215ENST00000488494 RTP2Q5QGT7 225 aa19.43■□□□□ 0.7
ITGB1-215ENST00000488494 FOXD4L5Q5VV16 416 aaPredicted RBP19.43■□□□□ 0.7
ITGB1-215ENST00000488494 ZPBP2Q6X784 338 aa19.43■□□□□ 0.7
ITGB1-215ENST00000488494 HAUS6Q7Z4H7 955 aa19.43■□□□□ 0.7
ITGB1-215ENST00000488494 MYCT1Q8N699 235 aa19.43■□□□□ 0.7
ITGB1-215ENST00000488494 KRI1Q8N9T8 703 aaKnown RBP19.43■□□□□ 0.7
ITGB1-215ENST00000488494 FOXD4L4Q8WXT5 416 aaPredicted RBP19.43■□□□□ 0.7
ITGB1-215ENST00000488494 POMKQ9H5K3 350 aa19.43■□□□□ 0.7
ITGB1-215ENST00000488494 GOLGA2P5Q9HBQ8 144 aa19.43■□□□□ 0.7
ITGB1-215ENST00000488494 C11orf16Q9NQ32 467 aa19.43■□□□□ 0.7
ITGB1-215ENST00000488494 MAN1C1Q9NR34 630 aa19.43■□□□□ 0.7
ITGB1-215ENST00000488494 TSHZ2Q9NRE2 1034 aa19.43■□□□□ 0.7
ITGB1-215ENST00000488494 STK17AQ9UEE5 414 aa19.43■□□□□ 0.7
ITGB1-215ENST00000488494 CCDC39Q9UFE4 941 aa19.43■□□□□ 0.7
ITGB1-215ENST00000488494 MORC2Q9Y6X9 1032 aaPredicted RBP19.43■□□□□ 0.7
ITGB1-215ENST00000488494 SMIM28A0A1B0GU29 152 aa19.42■□□□□ 0.7
ITGB1-215ENST00000488494 GLUD1P00367 558 aa19.42■□□□□ 0.7
ITGB1-215ENST00000488494 MATR3P43243 847 aaKnown RBP eCLIP19.42■□□□□ 0.71e-6■■■■□ 21.4
ITGB1-215ENST00000488494 NASPP49321 788 aaPredicted RBP19.42■□□□□ 0.7
ITGB1-215ENST00000488494 SLC39A14Q15043 492 aa19.42■□□□□ 0.7
ITGB1-215ENST00000488494 PRSS55Q6UWB4 352 aaPredicted RBP19.42■□□□□ 0.7
ITGB1-215ENST00000488494 TMC5Q6UXY8 1006 aa19.42■□□□□ 0.7
ITGB1-215ENST00000488494 FEZF2Q8TBJ5 459 aa19.42■□□□□ 0.7
ITGB1-215ENST00000488494 RIPOR3Q96MK2 946 aa19.42■□□□□ 0.7
ITGB1-215ENST00000488494 NECTIN4Q96NY8 510 aa19.42■□□□□ 0.7
ITGB1-215ENST00000488494 RXFP1Q9HBX9 757 aa19.42■□□□□ 0.7
ITGB1-215ENST00000488494 HNRNPDLO14979 420 aaKnown RBP19.41■□□□□ 0.7
ITGB1-215ENST00000488494 RPL17P18621 184 aaKnown RBP19.41■□□□□ 0.7
ITGB1-215ENST00000488494 MTHFRP42898 656 aa19.41■□□□□ 0.7
ITGB1-215ENST00000488494 LIG4P49917 911 aa19.41■□□□□ 0.7
ITGB1-215ENST00000488494 CLCNKBP51801 687 aa19.41■□□□□ 0.7
ITGB1-215ENST00000488494 CREMQ03060 361 aa19.41■□□□□ 0.7
ITGB1-215ENST00000488494 SOX4Q06945 474 aaPredicted RBP19.41■□□□□ 0.7
ITGB1-215ENST00000488494 MCL1Q07820 350 aa19.41■□□□□ 0.7
ITGB1-215ENST00000488494 STK38Q15208 465 aa19.41■□□□□ 0.7
ITGB1-215ENST00000488494 SEZ6Q53EL9 994 aa19.41■□□□□ 0.7
ITGB1-215ENST00000488494 XKR4Q5GH76 650 aa19.41■□□□□ 0.7
ITGB1-215ENST00000488494 RRAGBQ5VZM2 374 aa19.41■□□□□ 0.7
ITGB1-215ENST00000488494 GLYCTKQ8IVS8 523 aa19.41■□□□□ 0.7
ITGB1-215ENST00000488494 UROC1Q96N76 676 aa19.41■□□□□ 0.7
ITGB1-215ENST00000488494 ZMAT2Q96NC0 199 aaKnown RBP19.41■□□□□ 0.7
ITGB1-215ENST00000488494 ACAP3Q96P50 834 aa19.41■□□□□ 0.7
ITGB1-215ENST00000488494 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP19.41■□□□□ 0.7
ITGB1-215ENST00000488494 CNTN3Q9P232 1028 aa19.41■□□□□ 0.7
ITGB1-215ENST00000488494 TBX20Q9UMR3 447 aa19.41■□□□□ 0.7
ITGB1-215ENST00000488494 DENND4AQ7Z401 1863 aa19.4■□□□□ 0.7
ITGB1-215ENST00000488494 CLDN3O15551 220 aa19.4■□□□□ 0.7
ITGB1-215ENST00000488494 MEFVO15553 781 aaPredicted RBP19.4■□□□□ 0.7
ITGB1-215ENST00000488494 TRAK2O60296 914 aa19.4■□□□□ 0.7
ITGB1-215ENST00000488494 B3GAT3O94766 335 aa19.4■□□□□ 0.7
ITGB1-215ENST00000488494 MYBP10242 640 aa19.4■□□□□ 0.7
ITGB1-215ENST00000488494 SCP2P22307 547 aa19.4■□□□□ 0.7
ITGB1-215ENST00000488494 IGFBP6P24592 240 aaPredicted RBP19.4■□□□□ 0.7
ITGB1-215ENST00000488494 DDIT3P35638 169 aa19.4■□□□□ 0.7
ITGB1-215ENST00000488494 ELAVL2Q12926 359 aaKnown RBP19.4■□□□□ 0.7
ITGB1-215ENST00000488494 HERC4Q5GLZ8 1057 aaPredicted RBP19.4■□□□□ 0.7
ITGB1-215ENST00000488494 FAM171A1Q5VUB5 890 aa19.4■□□□□ 0.7
ITGB1-215ENST00000488494 ALKAL1Q6UXT8 129 aa19.4■□□□□ 0.7
ITGB1-215ENST00000488494 DYMQ7RTS9 669 aa19.4■□□□□ 0.7
ITGB1-215ENST00000488494 CEP57Q86XR8 500 aa19.4■□□□□ 0.7
ITGB1-215ENST00000488494 GPR65Q8IYL9 337 aa19.4■□□□□ 0.7
ITGB1-215ENST00000488494 KCNN1Q92952 543 aa19.4■□□□□ 0.7
ITGB1-215ENST00000488494 LRFN3Q9BTN0 628 aa19.4■□□□□ 0.7
ITGB1-215ENST00000488494 TTPALQ9BTX7 342 aa19.4■□□□□ 0.7
ITGB1-215ENST00000488494 HAPLN2Q9GZV7 340 aa19.4■□□□□ 0.7
ITGB1-215ENST00000488494 SLC38A7Q9NVC3 462 aa19.4■□□□□ 0.7
ITGB1-215ENST00000488494 A0A087X0B3 334 aa19.39■□□□□ 0.69
ITGB1-215ENST00000488494 TMEM189-UBE2V1I3L0A0 370 aa19.39■□□□□ 0.69
ITGB1-215ENST00000488494 CXCL8P10145 99 aa19.39■□□□□ 0.69
ITGB1-215ENST00000488494 KCNE1P15382 129 aa19.39■□□□□ 0.69
ITGB1-215ENST00000488494 STAT6P42226 847 aa19.39■□□□□ 0.69
ITGB1-215ENST00000488494 UPP1Q16831 310 aa19.39■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms