RNA–Protein interactions for RNA: ENST00000488166.1

ITSN1-230, Transcript of intersectin 1, humanhuman

TSL 3

Gene ITSN1, Length 986 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-230ENST00000488166 CITO14578 2027 aa18.74■□□□□ 0.59
ITSN1-230ENST00000488166 VPS13AQ96RL7 3174 aa18.74■□□□□ 0.59
ITSN1-230ENST00000488166 C8AP07357 584 aa18.73■□□□□ 0.59
ITSN1-230ENST00000488166 CCT6AP40227 531 aaKnown RBP18.73■□□□□ 0.59
ITSN1-230ENST00000488166 EEF1DP3Q658K8 133 aa18.73■□□□□ 0.59
ITSN1-230ENST00000488166 PDXDC1Q6P996 788 aa18.73■□□□□ 0.59
ITSN1-230ENST00000488166 LNX1Q8TBB1 728 aaPredicted RBP18.73■□□□□ 0.59
ITSN1-230ENST00000488166 PIK3R5Q8WYR1 880 aa18.73■□□□□ 0.59
ITSN1-230ENST00000488166 CLSTN3Q9BQT9 956 aa18.73■□□□□ 0.59
ITSN1-230ENST00000488166 KIFC3Q9BVG8 833 aa18.73■□□□□ 0.59
ITSN1-230ENST00000488166 CXCL16Q9H2A7 254 aa18.73■□□□□ 0.59
ITSN1-230ENST00000488166 TBC1D17Q9HA65 648 aa18.73■□□□□ 0.59
ITSN1-230ENST00000488166 PPP4R2Q9NY27 417 aa18.73■□□□□ 0.59
ITSN1-230ENST00000488166 NUMBLQ9Y6R0 609 aa18.73■□□□□ 0.59
ITSN1-230ENST00000488166 CCL16O15467 120 aa18.72■□□□□ 0.59
ITSN1-230ENST00000488166 PAPLNO95428 1278 aa18.72■□□□□ 0.59
ITSN1-230ENST00000488166 CENPBP07199 599 aaPredicted RBP18.72■□□□□ 0.59
ITSN1-230ENST00000488166 ORC2Q13416 577 aaPredicted RBP18.72■□□□□ 0.59
ITSN1-230ENST00000488166 DCAF4L1Q3SXM0 396 aa18.72■□□□□ 0.59
ITSN1-230ENST00000488166 GLRA4Q5JXX5 417 aa18.72■□□□□ 0.59
ITSN1-230ENST00000488166 SPECC1Q5M775 1068 aa18.72■□□□□ 0.59
ITSN1-230ENST00000488166 TTC38Q5R3I4 469 aa18.72■□□□□ 0.59
ITSN1-230ENST00000488166 FAM184AQ8NB25 1140 aa18.72■□□□□ 0.59
ITSN1-230ENST00000488166 CCDC113Q9H0I3 377 aa18.72■□□□□ 0.59
ITSN1-230ENST00000488166 FOXP1Q9H334 677 aaPredicted RBP18.72■□□□□ 0.59
ITSN1-230ENST00000488166 LIMCH1Q9UPQ0 1083 aa18.72■□□□□ 0.59
ITSN1-230ENST00000488166 XYLBO75191 536 aa18.71■□□□□ 0.59
ITSN1-230ENST00000488166 EDN1P05305 212 aa18.71■□□□□ 0.59
ITSN1-230ENST00000488166 HNRNPA1P09651 372 aaKnown RBP eCLIP18.71■□□□□ 0.59
ITSN1-230ENST00000488166 EFNA5P52803 228 aa18.71■□□□□ 0.59
ITSN1-230ENST00000488166 NTHL1P78549 312 aa18.71■□□□□ 0.59
ITSN1-230ENST00000488166 HTR4Q13639 388 aa18.71■□□□□ 0.59
ITSN1-230ENST00000488166 ATF7IP2Q5U623 682 aa18.71■□□□□ 0.59
ITSN1-230ENST00000488166 APBB1IPQ7Z5R6 666 aaPredicted RBP18.71■□□□□ 0.59
ITSN1-230ENST00000488166 KIFAP3Q92845 792 aa18.71■□□□□ 0.59
ITSN1-230ENST00000488166 BHMT2Q9H2M3 363 aa18.71■□□□□ 0.59
ITSN1-230ENST00000488166 ARHGEF3Q9NR81 526 aa18.71■□□□□ 0.59
ITSN1-230ENST00000488166 LRWD1Q9UFC0 647 aa18.71■□□□□ 0.59
ITSN1-230ENST00000488166 NOL7Q9UMY1 257 aaKnown RBP18.71■□□□□ 0.59
ITSN1-230ENST00000488166 ZFP37Q9Y6Q3 630 aaPredicted RBP18.71■□□□□ 0.59
ITSN1-230ENST00000488166 ANHXE9PGG2 379 aa18.7■□□□□ 0.58
ITSN1-230ENST00000488166 K7ERI5 159 aa18.7■□□□□ 0.58
ITSN1-230ENST00000488166 B3GAT3O94766 335 aa18.7■□□□□ 0.58
ITSN1-230ENST00000488166 DCNP07585 359 aaKnown RBP18.7■□□□□ 0.58
ITSN1-230ENST00000488166 MUTP22033 750 aa18.7■□□□□ 0.58
ITSN1-230ENST00000488166 OR1D2P34982 312 aa18.7■□□□□ 0.58
ITSN1-230ENST00000488166 NAB2Q15742 525 aa18.7■□□□□ 0.58
ITSN1-230ENST00000488166 AXDND1Q5T1B0 1012 aaPredicted RBP18.7■□□□□ 0.58
ITSN1-230ENST00000488166 DCLRE1AQ6PJP8 1040 aa18.7■□□□□ 0.58
ITSN1-230ENST00000488166 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.7■□□□□ 0.58
ITSN1-230ENST00000488166 ADSSL1Q8N142 457 aa18.7■□□□□ 0.58
ITSN1-230ENST00000488166 SLC7A14Q8TBB6 771 aa18.7■□□□□ 0.58
ITSN1-230ENST00000488166 KCNG4Q8TDN1 519 aa18.7■□□□□ 0.58
ITSN1-230ENST00000488166 CDH7Q9ULB5 785 aa18.7■□□□□ 0.58
ITSN1-230ENST00000488166 KIAA1024Q9UPX6 916 aa18.7■□□□□ 0.58
ITSN1-230ENST00000488166 SIT1Q9Y3P8 196 aa18.7■□□□□ 0.58
ITSN1-230ENST00000488166 CCDC169A6NNP5 214 aa18.69■□□□□ 0.58
ITSN1-230ENST00000488166 ADAM12O43184 909 aa18.69■□□□□ 0.58
ITSN1-230ENST00000488166 RBM25P49756 843 aaKnown RBP18.69■□□□□ 0.58
ITSN1-230ENST00000488166 CLCNKBP51801 687 aa18.69■□□□□ 0.58
ITSN1-230ENST00000488166 NBR1Q14596 966 aa18.69■□□□□ 0.58
ITSN1-230ENST00000488166 ECM1Q16610 540 aa18.69■□□□□ 0.58
ITSN1-230ENST00000488166 PARM1Q6UWI2 310 aa18.69■□□□□ 0.58
ITSN1-230ENST00000488166 FGF14Q92915 247 aa18.69■□□□□ 0.58
ITSN1-230ENST00000488166 SNX27Q96L92 541 aa18.69■□□□□ 0.58
ITSN1-230ENST00000488166 LLPHQ9BRT6 129 aaKnown RBP18.69■□□□□ 0.58
ITSN1-230ENST00000488166 DDX19AQ9NUU7 478 aaKnown RBP18.69■□□□□ 0.58
ITSN1-230ENST00000488166 NOTCH4Q99466 2003 aa18.69■□□□□ 0.58
ITSN1-230ENST00000488166 TRAPPC3O43617 180 aa18.68■□□□□ 0.58
ITSN1-230ENST00000488166 SEC24BO95487 1268 aa18.68■□□□□ 0.58
ITSN1-230ENST00000488166 HOXA9P31269 272 aa18.68■□□□□ 0.58
ITSN1-230ENST00000488166 FXR2P51116 673 aaKnown RBP eCLIP18.68■□□□□ 0.58
ITSN1-230ENST00000488166 YARSP54577 528 aaKnown RBP18.68■□□□□ 0.58
ITSN1-230ENST00000488166 HMGN5P82970 282 aaKnown RBP18.68■□□□□ 0.58
ITSN1-230ENST00000488166 NT5DC1Q5TFE4 455 aa18.68■□□□□ 0.58
ITSN1-230ENST00000488166 PHLDB3Q6NSJ2 640 aa18.68■□□□□ 0.58
ITSN1-230ENST00000488166 MTSS1LQ765P7 747 aa18.68■□□□□ 0.58
ITSN1-230ENST00000488166 FBXO18Q8NFZ0 1043 aa18.68■□□□□ 0.58
ITSN1-230ENST00000488166 SNX29Q8TEQ0 813 aa18.68■□□□□ 0.58
ITSN1-230ENST00000488166 FGF13Q92913 245 aa18.68■□□□□ 0.58
ITSN1-230ENST00000488166 UROC1Q96N76 676 aa18.68■□□□□ 0.58
ITSN1-230ENST00000488166 RPP25Q9BUL9 199 aaKnown RBP18.68■□□□□ 0.58
ITSN1-230ENST00000488166 CCDC94Q9BW85 323 aaPredicted RBP18.68■□□□□ 0.58
ITSN1-230ENST00000488166 RAB34Q9BZG1 259 aa18.68■□□□□ 0.58
ITSN1-230ENST00000488166 GOLGA2P5Q9HBQ8 144 aa18.68■□□□□ 0.58
ITSN1-230ENST00000488166 SLC2A4RGQ9NR83 387 aa18.68■□□□□ 0.58
ITSN1-230ENST00000488166 CDY1Q9Y6F8 540 aa18.68■□□□□ 0.58
ITSN1-230ENST00000488166 PDCD11Q14690 1871 aaKnown RBP18.68■□□□□ 0.58
ITSN1-230ENST00000488166 FGFR3P22607 806 aa18.67■□□□□ 0.58
ITSN1-230ENST00000488166 TRAPPC10P48553 1259 aa18.67■□□□□ 0.58
ITSN1-230ENST00000488166 PEX3P56589 373 aa18.67■□□□□ 0.58
ITSN1-230ENST00000488166 OSTNP61366 133 aa18.67■□□□□ 0.58
ITSN1-230ENST00000488166 GPC5P78333 572 aa18.67■□□□□ 0.58
ITSN1-230ENST00000488166 RAB33AQ14088 237 aa18.67■□□□□ 0.58
ITSN1-230ENST00000488166 ITFG1Q8TB96 612 aa18.67■□□□□ 0.58
ITSN1-230ENST00000488166 SHDQ96IW2 340 aa18.67■□□□□ 0.58
ITSN1-230ENST00000488166 PPP1R10Q96QC0 940 aaKnown RBP18.67■□□□□ 0.58
ITSN1-230ENST00000488166 TOPORSQ9NS56 1045 aaPredicted RBP18.67■□□□□ 0.58
ITSN1-230ENST00000488166 HCFC1R1Q9NWW0 138 aa18.67■□□□□ 0.58
ITSN1-230ENST00000488166 MTRRQ9UBK8 725 aa18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms