RNA–Protein interactions for RNA: ENST00000488023.1

HFM1-208, Transcript of HFM1, ATP dependent DNA helicase homolog, human

TSL 5

Gene HFM1, Length 1,699 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HFM1-208	ENST00000488023	EIF5	P55010	431 aa	Known RBP	4.25	□□□□□ -1.73
HFM1-208	ENST00000488023	MANF	P55145	182 aa	Known RBP	4.25	□□□□□ -1.73
HFM1-208	ENST00000488023	CCT2	P78371	535 aa	Known RBP	4.25	□□□□□ -1.73
HFM1-208	ENST00000488023	ICAM4	Q14773	271 aa		4.25	□□□□□ -1.73
HFM1-208	ENST00000488023	TMEM132B	Q14DG7	1078 aa		4.25	□□□□□ -1.73
HFM1-208	ENST00000488023	UGT8	Q16880	541 aa		4.25	□□□□□ -1.73
HFM1-208	ENST00000488023	C3orf36	Q3SXR2	165 aa		4.25	□□□□□ -1.73
HFM1-208	ENST00000488023	PRR31	Q5SQ13	230 aa		4.25	□□□□□ -1.73
HFM1-208	ENST00000488023	CYP26C1	Q6V0L0	522 aa		4.25	□□□□□ -1.73
HFM1-208	ENST00000488023	MAEA	Q7L5Y9	396 aa		4.25	□□□□□ -1.73
HFM1-208	ENST00000488023	DAAM2	Q86T65	1068 aa		4.25	□□□□□ -1.73
HFM1-208	ENST00000488023	ARRDC4	Q8NCT1	418 aa		4.25	□□□□□ -1.73
HFM1-208	ENST00000488023	TTLL11	Q8NHH1	800 aa		4.25	□□□□□ -1.73
HFM1-208	ENST00000488023	TMEM209	Q96SK2	561 aa		4.25	□□□□□ -1.73
HFM1-208	ENST00000488023	KLC2	Q9H0B6	622 aa		4.25	□□□□□ -1.73
HFM1-208	ENST00000488023	PPP4R1L	Q9P1A2	415 aa		4.25	□□□□□ -1.73
HFM1-208	ENST00000488023	ASH2L	Q9UBL3	628 aa		4.25	□□□□□ -1.73
HFM1-208	ENST00000488023	GRHPR	Q9UBQ7	328 aa		4.25	□□□□□ -1.73
HFM1-208	ENST00000488023	ING1	Q9UK53	422 aa	Predicted RBP	4.25	□□□□□ -1.73
HFM1-208	ENST00000488023	CRYL1	Q9Y2S2	319 aa		4.25	□□□□□ -1.73
HFM1-208	ENST00000488023	SNX13	Q9Y5W8	968 aa		4.25	□□□□□ -1.73
HFM1-208	ENST00000488023	POM121B	A6NF01	834 aa		4.24	□□□□□ -1.73
HFM1-208	ENST00000488023	DDX3X	O00571	662 aa	Known RBP eCLIP	4.24	□□□□□ -1.73	5e-8	■■□□□ 11.4
HFM1-208	ENST00000488023	HTRA2	O43464	458 aa	Predicted RBP	4.24	□□□□□ -1.73
HFM1-208	ENST00000488023	LAMTOR5	O43504	91 aa		4.24	□□□□□ -1.73
HFM1-208	ENST00000488023	DTNB	O60941	627 aa		4.24	□□□□□ -1.73
HFM1-208	ENST00000488023	HIP1R	O75146	1068 aa		4.24	□□□□□ -1.73
HFM1-208	ENST00000488023	IFIT1	P09914	478 aa	Known RBP	4.24	□□□□□ -1.73
HFM1-208	ENST00000488023	MYF5	P13349	255 aa		4.24	□□□□□ -1.73
HFM1-208	ENST00000488023	CAPN3	P20807	821 aa		4.24	□□□□□ -1.73
HFM1-208	ENST00000488023	TERF1	P54274	439 aa		4.24	□□□□□ -1.73
HFM1-208	ENST00000488023	MPP1	Q00013	466 aa		4.24	□□□□□ -1.73
HFM1-208	ENST00000488023	ICA1	Q05084	483 aa		4.24	□□□□□ -1.73
HFM1-208	ENST00000488023	ZNF543	Q08ER8	600 aa		4.24	□□□□□ -1.73
HFM1-208	ENST00000488023	BLMH	Q13867	455 aa		4.24	□□□□□ -1.73
HFM1-208	ENST00000488023	SURF1	Q15526	300 aa		4.24	□□□□□ -1.73
HFM1-208	ENST00000488023	HIBCH	Q6NVY1	386 aa	Predicted RBP	4.24	□□□□□ -1.73
HFM1-208	ENST00000488023	CC2D1A	Q6P1N0	951 aa	Predicted RBP	4.24	□□□□□ -1.73
HFM1-208	ENST00000488023	TEPP	Q6URK8	271 aa		4.24	□□□□□ -1.73
HFM1-208	ENST00000488023	FAM43B	Q6ZT52	329 aa	Predicted RBP	4.24	□□□□□ -1.73
HFM1-208	ENST00000488023	TBC1D1	Q86TI0	1168 aa	Predicted RBP	4.24	□□□□□ -1.73
HFM1-208	ENST00000488023	STK32C	Q86UX6	486 aa		4.24	□□□□□ -1.73
HFM1-208	ENST00000488023	RBM12B	Q8IXT5	1001 aa	Known RBP	4.24	□□□□□ -1.73
HFM1-208	ENST00000488023	PLBD2	Q8NHP8	589 aa		4.24	□□□□□ -1.73
HFM1-208	ENST00000488023	CLEC4D	Q8WXI8	215 aa		4.24	□□□□□ -1.73
HFM1-208	ENST00000488023	ARL8A	Q96BM9	186 aa		4.24	□□□□□ -1.73
HFM1-208	ENST00000488023	LCOR	Q96JN0	433 aa	Predicted RBP	4.24	□□□□□ -1.73
HFM1-208	ENST00000488023	CLIC6	Q96NY7	704 aa		4.24	□□□□□ -1.73
HFM1-208	ENST00000488023	CDK5RAP1	Q96SZ6	601 aa	Known RBP	4.24	□□□□□ -1.73
HFM1-208	ENST00000488023	C22orf23	Q9BZE7	217 aa		4.24	□□□□□ -1.73
HFM1-208	ENST00000488023	CD244	Q9BZW8	370 aa		4.24	□□□□□ -1.73
HFM1-208	ENST00000488023	DDX24	Q9GZR7	859 aa	Known RBP eCLIP	4.24	□□□□□ -1.73	9e-8	■■■■■ 29.2
HFM1-208	ENST00000488023	CD248	Q9HCU0	757 aa		4.24	□□□□□ -1.73
HFM1-208	ENST00000488023	ALG13	Q9NP73	1137 aa	Known RBP	4.24	□□□□□ -1.73
HFM1-208	ENST00000488023	IFT80	Q9P2H3	777 aa	Predicted RBP	4.24	□□□□□ -1.73
HFM1-208	ENST00000488023	PDP2	Q9P2J9	529 aa		4.24	□□□□□ -1.73
HFM1-208	ENST00000488023	C11orf21	Q9P2W6	132 aa		4.24	□□□□□ -1.73
HFM1-208	ENST00000488023	SRPK3	Q9UPE1	567 aa		4.24	□□□□□ -1.73
HFM1-208	ENST00000488023	NR2E3	Q9Y5X4	410 aa		4.24	□□□□□ -1.73
HFM1-208	ENST00000488023	B3GALT1	Q9Y5Z6	326 aa		4.24	□□□□□ -1.73
HFM1-208	ENST00000488023	B4GALT3	O60512	393 aa		4.23	□□□□□ -1.73
HFM1-208	ENST00000488023	LRG1	P02750	347 aa		4.23	□□□□□ -1.73
HFM1-208	ENST00000488023	AMH	P03971	560 aa		4.23	□□□□□ -1.73
HFM1-208	ENST00000488023	CYP17A1	P05093	508 aa		4.23	□□□□□ -1.73
HFM1-208	ENST00000488023	VEGFA	P15692	232 aa	Predicted RBP	4.23	□□□□□ -1.73
HFM1-208	ENST00000488023	PDIA3	P30101	505 aa	Known RBP	4.23	□□□□□ -1.73
HFM1-208	ENST00000488023	CDK17	Q00537	523 aa		4.23	□□□□□ -1.73
HFM1-208	ENST00000488023	SPIRE1	Q08AE8	756 aa		4.23	□□□□□ -1.73
HFM1-208	ENST00000488023	ADAM9	Q13443	819 aa		4.23	□□□□□ -1.73
HFM1-208	ENST00000488023	TUSC3	Q13454	348 aa		4.23	□□□□□ -1.73
HFM1-208	ENST00000488023	PMS2P11	Q13670	270 aa		4.23	□□□□□ -1.73
HFM1-208	ENST00000488023	POLD3	Q15054	466 aa	Predicted RBP	4.23	□□□□□ -1.73
HFM1-208	ENST00000488023	TAF5	Q15542	800 aa		4.23	□□□□□ -1.73
HFM1-208	ENST00000488023	MUM1	Q2TAK8	710 aa		4.23	□□□□□ -1.73
HFM1-208	ENST00000488023	ZBTB41	Q5SVQ8	909 aa		4.23	□□□□□ -1.73
HFM1-208	ENST00000488023	GPATCH4	Q5T3I0	446 aa	Known RBP	4.23	□□□□□ -1.73
HFM1-208	ENST00000488023	INTS11	Q5TA45	600 aa	Known RBP	4.23	□□□□□ -1.73
HFM1-208	ENST00000488023	MBNL2	Q5VZF2	373 aa	Known RBP	4.23	□□□□□ -1.73
HFM1-208	ENST00000488023	ARMC3	Q5W041	872 aa		4.23	□□□□□ -1.73
HFM1-208	ENST00000488023	PDXDC1	Q6P996	788 aa		4.23	□□□□□ -1.73
HFM1-208	ENST00000488023	ANKRD18A	Q8IVF6	992 aa		4.23	□□□□□ -1.73
HFM1-208	ENST00000488023	KLHDC4	Q8TBB5	520 aa		4.23	□□□□□ -1.73
HFM1-208	ENST00000488023	TSPEAR	Q8WU66	669 aa		4.23	□□□□□ -1.73
HFM1-208	ENST00000488023	DLG3	Q92796	817 aa		4.23	□□□□□ -1.73
HFM1-208	ENST00000488023	C16orf92	Q96LL3	132 aa		4.23	□□□□□ -1.73
HFM1-208	ENST00000488023	SERINC2	Q96SA4	455 aa		4.23	□□□□□ -1.73
HFM1-208	ENST00000488023	POFUT1	Q9H488	388 aa		4.23	□□□□□ -1.73
HFM1-208	ENST00000488023	C14orf93	Q9H972	538 aa	Known RBP	4.23	□□□□□ -1.73
HFM1-208	ENST00000488023	ARMT1	Q9H993	441 aa		4.23	□□□□□ -1.73
HFM1-208	ENST00000488023	ATP6V0A4	Q9HBG4	840 aa		4.23	□□□□□ -1.73
HFM1-208	ENST00000488023	ACSS2	Q9NR19	701 aa		4.23	□□□□□ -1.73
HFM1-208	ENST00000488023	BLOC1S4	Q9NUP1	217 aa		4.23	□□□□□ -1.73
HFM1-208	ENST00000488023	GGA3	Q9NZ52	723 aa		4.23	□□□□□ -1.73
HFM1-208	ENST00000488023	DPP7	Q9UHL4	492 aa		4.23	□□□□□ -1.73
HFM1-208	ENST00000488023	GJD2	Q9UKL4	321 aa		4.23	□□□□□ -1.73
HFM1-208	ENST00000488023	DSE	Q9UL01	958 aa		4.23	□□□□□ -1.73
HFM1-208	ENST00000488023	MAGED2	Q9UNF1	606 aa	Predicted RBP	4.23	□□□□□ -1.73
HFM1-208	ENST00000488023	PRSS38	A1L453	326 aa		4.22	□□□□□ -1.73
HFM1-208	ENST00000488023	C9orf118	A6NHY6	69 aa		4.22	□□□□□ -1.73
HFM1-208	ENST00000488023	FAM90A27P	A6NNH2	459 aa		4.22	□□□□□ -1.73

Retrieved 100 of 20,778 RNA–protein pairs in 20 ms