RNA–Protein interactions for RNA: ENST00000487747.5

SMC4-219, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 637 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-219ENST00000487747 ACAP3Q96P50 834 aa6.02□□□□□ -1.45
SMC4-219ENST00000487747 ZSWIM1Q9BR11 485 aa6.02□□□□□ -1.45
SMC4-219ENST00000487747 KLHL11Q9NVR0 708 aa6.02□□□□□ -1.45
SMC4-219ENST00000487747 SCOCQ9UIL1 159 aa6.02□□□□□ -1.45
SMC4-219ENST00000487747 TBX22Q9Y458 520 aa6.02□□□□□ -1.45
SMC4-219ENST00000487747 ARHGEF17Q96PE2 2063 aaPredicted RBP6.02□□□□□ -1.45
SMC4-219ENST00000487747 MASP2O00187 686 aa6.01□□□□□ -1.45
SMC4-219ENST00000487747 PJA2O43164 708 aa6.01□□□□□ -1.45
SMC4-219ENST00000487747 ZEB2O60315 1214 aa6.01□□□□□ -1.45
SMC4-219ENST00000487747 PRSS23O95084 383 aa6.01□□□□□ -1.45
SMC4-219ENST00000487747 SPATA31D3P0C874 917 aa6.01□□□□□ -1.45
SMC4-219ENST00000487747 HKR1P10072 659 aa6.01□□□□□ -1.45
SMC4-219ENST00000487747 ITGAMP11215 1152 aa6.01□□□□□ -1.45
SMC4-219ENST00000487747 MPLP40238 635 aa6.01□□□□□ -1.45
SMC4-219ENST00000487747 PPP3CAQ08209 521 aa6.01□□□□□ -1.45
SMC4-219ENST00000487747 AFMIDQ63HM1 303 aa6.01□□□□□ -1.45
SMC4-219ENST00000487747 SPATA31D4Q6ZUB0 917 aa6.01□□□□□ -1.45
SMC4-219ENST00000487747 KCNK18Q7Z418 384 aa6.01□□□□□ -1.45
SMC4-219ENST00000487747 GPR149Q86SP6 731 aa6.01□□□□□ -1.45
SMC4-219ENST00000487747 LMBR1Q8WVP7 490 aa6.01□□□□□ -1.45
SMC4-219ENST00000487747 HOXB13Q92826 284 aaPredicted RBP6.01□□□□□ -1.45
SMC4-219ENST00000487747 RAX2Q96IS3 184 aa6.01□□□□□ -1.45
SMC4-219ENST00000487747 COQ10AQ96MF6 247 aa6.01□□□□□ -1.45
SMC4-219ENST00000487747 LDAHQ9H6V9 325 aa6.01□□□□□ -1.45
SMC4-219ENST00000487747 BCO1Q9HAY6 547 aa6.01□□□□□ -1.45
SMC4-219ENST00000487747 GOLGA8AA7E2F4 631 aa6□□□□□ -1.45
SMC4-219ENST00000487747 PHF2O75151 1096 aa6□□□□□ -1.45
SMC4-219ENST00000487747 ULK1O75385 1050 aa6□□□□□ -1.45
SMC4-219ENST00000487747 HLA-DOAP06340 250 aa6□□□□□ -1.45
SMC4-219ENST00000487747 SREBF1P36956 1147 aa6□□□□□ -1.45
SMC4-219ENST00000487747 SCAND1P57086 179 aa6□□□□□ -1.45
SMC4-219ENST00000487747 MRPS21P82921 87 aaKnown RBP6□□□□□ -1.45
SMC4-219ENST00000487747 HNRNPA0Q13151 305 aaKnown RBP6□□□□□ -1.45
SMC4-219ENST00000487747 MUM1Q2TAK8 710 aa6□□□□□ -1.45
SMC4-219ENST00000487747 PRR16Q569H4 304 aa6□□□□□ -1.45
SMC4-219ENST00000487747 STRIP1Q5VSL9 837 aa6□□□□□ -1.45
SMC4-219ENST00000487747 ABHD17BQ5VST6 288 aa6□□□□□ -1.45
SMC4-219ENST00000487747 MAPKAPK5Q8IW41 473 aa6□□□□□ -1.45
SMC4-219ENST00000487747 RHOT2Q8IXI1 618 aa6□□□□□ -1.45
SMC4-219ENST00000487747 SLC44A3Q8N4M1 653 aa6□□□□□ -1.45
SMC4-219ENST00000487747 MYOCQ99972 504 aa6□□□□□ -1.45
SMC4-219ENST00000487747 MRI1Q9BV20 369 aa6□□□□□ -1.45
SMC4-219ENST00000487747 RNF181Q9P0P0 153 aa6□□□□□ -1.45
SMC4-219ENST00000487747 ATP11BQ9Y2G3 1177 aa6□□□□□ -1.45
SMC4-219ENST00000487747 SIK3Q9Y2K2 1263 aa6□□□□□ -1.45
SMC4-219ENST00000487747 AATKQ6ZMQ8 1374 aa5.99□□□□□ -1.45
SMC4-219ENST00000487747 CDKL5O76039 1030 aa5.99□□□□□ -1.45
SMC4-219ENST00000487747 ZNF37AP17032 561 aaPredicted RBP5.99□□□□□ -1.45
SMC4-219ENST00000487747 FPR1P21462 350 aa5.99□□□□□ -1.45
SMC4-219ENST00000487747 SLC6A2P23975 617 aa5.99□□□□□ -1.45
SMC4-219ENST00000487747 AVPR1BP47901 424 aa5.99□□□□□ -1.45
SMC4-219ENST00000487747 C21orf58P58505 322 aa5.99□□□□□ -1.45
SMC4-219ENST00000487747 MRPS9P82933 396 aaKnown RBP5.99□□□□□ -1.45
SMC4-219ENST00000487747 TOR2AQ5JU69 321 aa5.99□□□□□ -1.45
SMC4-219ENST00000487747 COLEC12Q5KU26 742 aa5.99□□□□□ -1.45
SMC4-219ENST00000487747 LHFPL2Q6ZUX7 228 aa5.99□□□□□ -1.45
SMC4-219ENST00000487747 PQLC1Q8N2U9 271 aa5.99□□□□□ -1.45
SMC4-219ENST00000487747 TMEM132CQ8N3T6 1108 aa5.99□□□□□ -1.45
SMC4-219ENST00000487747 SIMC1Q8NDZ2 872 aa5.99□□□□□ -1.45
SMC4-219ENST00000487747 AUTS2Q8WXX7 1259 aa5.99□□□□□ -1.45
SMC4-219ENST00000487747 PAWRQ96IZ0 340 aaKnown RBP5.99□□□□□ -1.45
SMC4-219ENST00000487747 ORAI2Q96SN7 254 aa5.99□□□□□ -1.45
SMC4-219ENST00000487747 IFT122Q9HBG6 1241 aa5.99□□□□□ -1.45
SMC4-219ENST00000487747 APOBEC2Q9Y235 224 aaKnown RBP5.99□□□□□ -1.45
SMC4-219ENST00000487747 ESRRBO95718 433 aa5.98□□□□□ -1.45
SMC4-219ENST00000487747 SNRPA1P09661 255 aaKnown RBP5.98□□□□□ -1.45
SMC4-219ENST00000487747 ALDH1A3P47895 512 aa5.98□□□□□ -1.45
SMC4-219ENST00000487747 SRSF2Q01130 221 aaKnown RBP5.98□□□□□ -1.45
SMC4-219ENST00000487747 OCA2Q04671 838 aa5.98□□□□□ -1.45
SMC4-219ENST00000487747 FBXO42Q6P3S6 717 aa5.98□□□□□ -1.45
SMC4-219ENST00000487747 RD3Q7Z3Z2 195 aa5.98□□□□□ -1.45
SMC4-219ENST00000487747 FAM98AQ8NCA5 519 aaKnown RBP5.98□□□□□ -1.45
SMC4-219ENST00000487747 ALOXE3Q9BYJ1 711 aa5.98□□□□□ -1.45
SMC4-219ENST00000487747 FBXO34Q9NWN3 711 aa5.98□□□□□ -1.45
SMC4-219ENST00000487747 SLC23A1Q9UHI7 598 aa5.98□□□□□ -1.45
SMC4-219ENST00000487747 A0A1B0GTW7 788 aa5.97□□□□□ -1.45
SMC4-219ENST00000487747 RAP2AP10114 183 aa5.97□□□□□ -1.45
SMC4-219ENST00000487747 ECHS1P30084 290 aa5.97□□□□□ -1.45
SMC4-219ENST00000487747 CXCR5P32302 372 aa5.97□□□□□ -1.45
SMC4-219ENST00000487747 GUCY1A2P33402 732 aa5.97□□□□□ -1.45
SMC4-219ENST00000487747 SP140Q13342 867 aa5.97□□□□□ -1.45
SMC4-219ENST00000487747 SEPT2Q15019 361 aa5.97□□□□□ -1.45
SMC4-219ENST00000487747 ZNF362Q5T0B9 420 aaPredicted RBP5.97□□□□□ -1.45
SMC4-219ENST00000487747 FATE1Q969F0 183 aa5.97□□□□□ -1.45
SMC4-219ENST00000487747 NACC2Q96BF6 587 aa5.97□□□□□ -1.45
SMC4-219ENST00000487747 Q96MF0 132 aa5.97□□□□□ -1.45
SMC4-219ENST00000487747 UHRF1Q96T88 793 aaPredicted RBP5.97□□□□□ -1.45
SMC4-219ENST00000487747 GREM2Q9H772 168 aa5.97□□□□□ -1.45
SMC4-219ENST00000487747 USP25Q9UHP3 1055 aa5.97□□□□□ -1.45
SMC4-219ENST00000487747 COX11Q9Y6N1 276 aa5.97□□□□□ -1.45
SMC4-219ENST00000487747 MAST3O60307 1309 aa5.97□□□□□ -1.45
SMC4-219ENST00000487747 SPATA31A6Q5VVP1 1343 aa5.97□□□□□ -1.45
SMC4-219ENST00000487747 MGST3O14880 152 aa5.96□□□□□ -1.46
SMC4-219ENST00000487747 FOSP01100 380 aaPredicted RBP5.96□□□□□ -1.46
SMC4-219ENST00000487747 FGFR4P22455 802 aa5.96□□□□□ -1.46
SMC4-219ENST00000487747 PCSK1P29120 753 aa5.96□□□□□ -1.46
SMC4-219ENST00000487747 GPR3P46089 330 aa5.96□□□□□ -1.46
SMC4-219ENST00000487747 SLC6A9P48067 706 aa5.96□□□□□ -1.46
SMC4-219ENST00000487747 STAT4Q14765 748 aa5.96□□□□□ -1.46
SMC4-219ENST00000487747 UBXN2BQ14CS0 331 aa5.96□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms