RNA–Protein interactions for RNA: ENST00000487709.1

HMGB1P36-201, Transcript of high mobility group box 1 pseudogene 36, humanhuman

BASIC

Gene HMGB1P36, Length 576 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P36-201ENST00000487709 AHRRA9YTQ3 701 aa4.91□□□□□ -1.62
HMGB1P36-201ENST00000487709 ELL2O00472 640 aaPredicted RBP4.91□□□□□ -1.62
HMGB1P36-201ENST00000487709 LPLP06858 475 aa4.91□□□□□ -1.62
HMGB1P36-201ENST00000487709 KIR2DL3P43628 341 aa4.91□□□□□ -1.62
HMGB1P36-201ENST00000487709 SRSF2Q01130 221 aaKnown RBP4.91□□□□□ -1.62
HMGB1P36-201ENST00000487709 MEF2AQ02078 507 aaPredicted RBP4.91□□□□□ -1.62
HMGB1P36-201ENST00000487709 PITRM1Q5JRX3 1037 aa4.91□□□□□ -1.62
HMGB1P36-201ENST00000487709 EPHA10Q5JZY3 1008 aa4.91□□□□□ -1.62
HMGB1P36-201ENST00000487709 BHLHA9Q7RTU4 235 aa4.91□□□□□ -1.62
HMGB1P36-201ENST00000487709 APBB1IPQ7Z5R6 666 aaPredicted RBP4.91□□□□□ -1.62
HMGB1P36-201ENST00000487709 MIER2Q8N344 545 aa4.91□□□□□ -1.62
HMGB1P36-201ENST00000487709 FATE1Q969F0 183 aa4.91□□□□□ -1.62
HMGB1P36-201ENST00000487709 HOOK2Q96ED9 719 aa4.91□□□□□ -1.62
HMGB1P36-201ENST00000487709 CAMKK2Q96RR4 588 aa4.91□□□□□ -1.62
HMGB1P36-201ENST00000487709 ORAI2Q96SN7 254 aa4.91□□□□□ -1.62
HMGB1P36-201ENST00000487709 CPPED1Q9BRF8 314 aaPredicted RBP4.91□□□□□ -1.62
HMGB1P36-201ENST00000487709 ADI1Q9BV57 179 aa4.91□□□□□ -1.62
HMGB1P36-201ENST00000487709 KCNH6Q9H252 994 aa4.91□□□□□ -1.62
HMGB1P36-201ENST00000487709 SERHL2Q9H4I8 314 aa4.91□□□□□ -1.62
HMGB1P36-201ENST00000487709 IFT122Q9HBG6 1241 aa4.91□□□□□ -1.62
HMGB1P36-201ENST00000487709 DPP7Q9UHL4 492 aa4.91□□□□□ -1.62
HMGB1P36-201ENST00000487709 PRSS50Q9UI38 385 aa4.91□□□□□ -1.62
HMGB1P36-201ENST00000487709 ZNF180Q9UJW8 692 aa4.91□□□□□ -1.62
HMGB1P36-201ENST00000487709 EID1Q9Y6B2 187 aa4.91□□□□□ -1.62
HMGB1P36-201ENST00000487709 CDY2AQ9Y6F7 541 aa4.91□□□□□ -1.62
HMGB1P36-201ENST00000487709 COX11Q9Y6N1 276 aa4.91□□□□□ -1.62
HMGB1P36-201ENST00000487709 GOLGA6CA6NDK9 693 aa4.9□□□□□ -1.63
HMGB1P36-201ENST00000487709 GOLGA6BA6NDN3 693 aa4.9□□□□□ -1.63
HMGB1P36-201ENST00000487709 INO80B-WBP1J3KQ70 363 aa4.9□□□□□ -1.63
HMGB1P36-201ENST00000487709 IL33O95760 270 aa4.9□□□□□ -1.63
HMGB1P36-201ENST00000487709 RPLP2P05387 115 aaKnown RBP4.9□□□□□ -1.63
HMGB1P36-201ENST00000487709 GOLGA6DP0CG33 693 aa4.9□□□□□ -1.63
HMGB1P36-201ENST00000487709 AGXTP21549 392 aa4.9□□□□□ -1.63
HMGB1P36-201ENST00000487709 APOBEC3AP31941 199 aaPredicted RBP4.9□□□□□ -1.63
HMGB1P36-201ENST00000487709 GPR3P46089 330 aa4.9□□□□□ -1.63
HMGB1P36-201ENST00000487709 KRTAP10-9P60411 292 aa4.9□□□□□ -1.63
HMGB1P36-201ENST00000487709 MCL1Q07820 350 aa4.9□□□□□ -1.63
HMGB1P36-201ENST00000487709 MUM1Q2TAK8 710 aa4.9□□□□□ -1.63
HMGB1P36-201ENST00000487709 INAVAQ3KP66 663 aa4.9□□□□□ -1.63
HMGB1P36-201ENST00000487709 MUM1L1Q5H9M0 696 aa4.9□□□□□ -1.63
HMGB1P36-201ENST00000487709 TMEM240Q5SV17 173 aa4.9□□□□□ -1.63
HMGB1P36-201ENST00000487709 PAPD7Q5XG87 772 aaKnown RBP4.9□□□□□ -1.63
HMGB1P36-201ENST00000487709 SP5Q6BEB4 398 aaPredicted RBP4.9□□□□□ -1.63
HMGB1P36-201ENST00000487709 FBXO42Q6P3S6 717 aa4.9□□□□□ -1.63
HMGB1P36-201ENST00000487709 CMTR2Q8IYT2 770 aaKnown RBP4.9□□□□□ -1.63
HMGB1P36-201ENST00000487709 LCORLQ8N3X6 602 aa4.9□□□□□ -1.63
HMGB1P36-201ENST00000487709 MYEOVQ96EZ4 313 aa4.9□□□□□ -1.63
HMGB1P36-201ENST00000487709 UIMC1Q96RL1 719 aa4.9□□□□□ -1.63
HMGB1P36-201ENST00000487709 NUP88Q99567 741 aaPredicted RBP4.9□□□□□ -1.63
HMGB1P36-201ENST00000487709 OSBPL6Q9BZF3 934 aa4.9□□□□□ -1.63
HMGB1P36-201ENST00000487709 INO80BQ9C086 356 aaPredicted RBP4.9□□□□□ -1.63
HMGB1P36-201ENST00000487709 GOLGA6AQ9NYA3 693 aa4.9□□□□□ -1.63
HMGB1P36-201ENST00000487709 ANKRD6Q9Y2G4 727 aa4.9□□□□□ -1.63
HMGB1P36-201ENST00000487709 TNKSO95271 1327 aa4.9□□□□□ -1.63
HMGB1P36-201ENST00000487709 OSMP13725 252 aa4.89□□□□□ -1.63
HMGB1P36-201ENST00000487709 CDK17Q00537 523 aa4.89□□□□□ -1.63
HMGB1P36-201ENST00000487709 TAP1Q03518 808 aa4.89□□□□□ -1.63
HMGB1P36-201ENST00000487709 MGAT5Q09328 741 aa4.89□□□□□ -1.63
HMGB1P36-201ENST00000487709 CCDC181Q5TID7 509 aa4.89□□□□□ -1.63
HMGB1P36-201ENST00000487709 UNQ6494/PRO21346Q6UXR6 183 aa4.89□□□□□ -1.63
HMGB1P36-201ENST00000487709 MIGA2Q7L4E1 593 aa4.89□□□□□ -1.63
HMGB1P36-201ENST00000487709 CHPFQ8IZ52 775 aa4.89□□□□□ -1.63
HMGB1P36-201ENST00000487709 CBARPQ8N350 705 aaPredicted RBP4.89□□□□□ -1.63
HMGB1P36-201ENST00000487709 SLC46A2Q9BY10 475 aa4.89□□□□□ -1.63
HMGB1P36-201ENST00000487709 CPEB1Q9BZB8 566 aaKnown RBP4.89□□□□□ -1.63
HMGB1P36-201ENST00000487709 TRPM5Q9NZQ8 1165 aa4.89□□□□□ -1.63
HMGB1P36-201ENST00000487709 ZIM2Q9NZV7 527 aa4.89□□□□□ -1.63
HMGB1P36-201ENST00000487709 IP6K2Q9UHH9 426 aa4.89□□□□□ -1.63
HMGB1P36-201ENST00000487709 FAM171A2A8MVW0 826 aa4.88□□□□□ -1.63
HMGB1P36-201ENST00000487709 NRP1O14786 923 aa4.88□□□□□ -1.63
HMGB1P36-201ENST00000487709 AKAP10O43572 662 aa4.88□□□□□ -1.63
HMGB1P36-201ENST00000487709 MARCH6O60337 910 aa4.88□□□□□ -1.63
HMGB1P36-201ENST00000487709 PHF2O75151 1096 aa4.88□□□□□ -1.63
HMGB1P36-201ENST00000487709 NCR1O76036 304 aa4.88□□□□□ -1.63
HMGB1P36-201ENST00000487709 PTH2RP49190 550 aa4.88□□□□□ -1.63
HMGB1P36-201ENST00000487709 MTNR1BP49286 362 aa4.88□□□□□ -1.63
HMGB1P36-201ENST00000487709 RAB27AP51159 221 aa4.88□□□□□ -1.63
HMGB1P36-201ENST00000487709 MALLQ13021 153 aa4.88□□□□□ -1.63
HMGB1P36-201ENST00000487709 CMIPQ8IY22 773 aa4.88□□□□□ -1.63
HMGB1P36-201ENST00000487709 UNC5BQ8IZJ1 945 aa4.88□□□□□ -1.63
HMGB1P36-201ENST00000487709 CAVIN3Q969G5 261 aa4.88□□□□□ -1.63
HMGB1P36-201ENST00000487709 HSPBAP1Q96EW2 488 aa4.88□□□□□ -1.63
HMGB1P36-201ENST00000487709 TEKT5Q96M29 485 aa4.88□□□□□ -1.63
HMGB1P36-201ENST00000487709 HAPLN2Q9GZV7 340 aa4.88□□□□□ -1.63
HMGB1P36-201ENST00000487709 CDH19Q9H159 772 aa4.88□□□□□ -1.63
HMGB1P36-201ENST00000487709 ZNF277Q9NRM2 450 aaPredicted RBP4.88□□□□□ -1.63
HMGB1P36-201ENST00000487709 ING3Q9NXR8 418 aa4.88□□□□□ -1.63
HMGB1P36-201ENST00000487709 PNMA8BQ9ULN7 279 aaPredicted RBP4.88□□□□□ -1.63
HMGB1P36-201ENST00000487709 MTSS1O43312 755 aa4.87□□□□□ -1.63
HMGB1P36-201ENST00000487709 HOXA3O43365 443 aaPredicted RBP4.87□□□□□ -1.63
HMGB1P36-201ENST00000487709 PRAMEF4O60810 478 aa4.87□□□□□ -1.63
HMGB1P36-201ENST00000487709 ZSCAN20P17040 1043 aaPredicted RBP4.87□□□□□ -1.63
HMGB1P36-201ENST00000487709 TYRP1P17643 537 aa4.87□□□□□ -1.63
HMGB1P36-201ENST00000487709 CYP2C19P33261 490 aa4.87□□□□□ -1.63
HMGB1P36-201ENST00000487709 AVPR1BP47901 424 aa4.87□□□□□ -1.63
HMGB1P36-201ENST00000487709 ADKP55263 362 aaKnown RBP4.87□□□□□ -1.63
HMGB1P36-201ENST00000487709 PCBP2Q15366 365 aaKnown RBP eCLIP4.87□□□□□ -1.63
HMGB1P36-201ENST00000487709 VPS72Q15906 364 aa4.87□□□□□ -1.63
HMGB1P36-201ENST00000487709 UAP1L1Q3KQV9 507 aa4.87□□□□□ -1.63
HMGB1P36-201ENST00000487709 PPP4R3AQ6IN85 833 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms