RNA–Protein interactions for RNA: ENST00000487698.5

SF3B1-211, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SF3B1, Length 2,127 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-211ENST00000487698 TRIM10Q9UDY6 481 aa10.21□□□□□ -0.78
SF3B1-211ENST00000487698 SRRDQ9UH36 339 aa10.21□□□□□ -0.78
SF3B1-211ENST00000487698 PDCD11Q14690 1871 aaKnown RBP10.2□□□□□ -0.78
SF3B1-211ENST00000487698 CENPFP49454 3210 aa10.2□□□□□ -0.78
SF3B1-211ENST00000487698 A0A087X0T9 212 aa10.2□□□□□ -0.78
SF3B1-211ENST00000487698 GPR25O00155 361 aa10.2□□□□□ -0.78
SF3B1-211ENST00000487698 FOXN3O00409 490 aaPredicted RBP10.2□□□□□ -0.78
SF3B1-211ENST00000487698 PJA2O43164 708 aa10.2□□□□□ -0.78
SF3B1-211ENST00000487698 TSPAN1O60635 241 aa10.2□□□□□ -0.78
SF3B1-211ENST00000487698 ADAMTS4O75173 837 aa10.2□□□□□ -0.78
SF3B1-211ENST00000487698 CSDE1O75534 798 aaKnown RBP10.2□□□□□ -0.78
SF3B1-211ENST00000487698 VNN1O95497 513 aa10.2□□□□□ -0.78
SF3B1-211ENST00000487698 FAM228BP0C875 321 aa10.2□□□□□ -0.78
SF3B1-211ENST00000487698 MCF2P10911 925 aa10.2□□□□□ -0.78
SF3B1-211ENST00000487698 CYP2C9P11712 490 aa10.2□□□□□ -0.78
SF3B1-211ENST00000487698 ARF4P18085 180 aaPredicted RBP10.2□□□□□ -0.78
SF3B1-211ENST00000487698 TNNI1P19237 187 aa10.2□□□□□ -0.78
SF3B1-211ENST00000487698 CDC42EP1Q00587 391 aa10.2□□□□□ -0.78
SF3B1-211ENST00000487698 WDR49Q8IV35 697 aa10.2□□□□□ -0.78
SF3B1-211ENST00000487698 SHC3Q92529 594 aa10.2□□□□□ -0.78
SF3B1-211ENST00000487698 KAT5Q92993 513 aa10.2□□□□□ -0.78
SF3B1-211ENST00000487698 NT5C1BQ96P26 610 aa10.2□□□□□ -0.78
SF3B1-211ENST00000487698 FAM49AQ9H0Q0 323 aaPredicted RBP10.2□□□□□ -0.78
SF3B1-211ENST00000487698 ATP8B3O60423 1300 aa10.2□□□□□ -0.78
SF3B1-211ENST00000487698 RIOK3O14730 519 aaKnown RBP10.19□□□□□ -0.78
SF3B1-211ENST00000487698 KRT86O43790 486 aa10.19□□□□□ -0.78
SF3B1-211ENST00000487698 HLA-DRAP01903 254 aa10.19□□□□□ -0.78
SF3B1-211ENST00000487698 PRKAR2AP13861 404 aaKnown RBP10.19□□□□□ -0.78
SF3B1-211ENST00000487698 ELNP15502 786 aa10.19□□□□□ -0.78
SF3B1-211ENST00000487698 VEGFBP49765 207 aa10.19□□□□□ -0.78
SF3B1-211ENST00000487698 AP3M2P53677 418 aa10.19□□□□□ -0.78
SF3B1-211ENST00000487698 CHMP4BP1P59074 171 aa10.19□□□□□ -0.78
SF3B1-211ENST00000487698 POU5F1Q01860 360 aaKnown RBP10.19□□□□□ -0.78
SF3B1-211ENST00000487698 GCNT1Q02742 428 aa10.19□□□□□ -0.78
SF3B1-211ENST00000487698 ENOX2Q16206 610 aaKnown RBP10.19□□□□□ -0.78
SF3B1-211ENST00000487698 ARHGAP44Q17R89 818 aa10.19□□□□□ -0.78
SF3B1-211ENST00000487698 KIZQ2M2Z5 673 aa10.19□□□□□ -0.78
SF3B1-211ENST00000487698 GNASQ5JWF2 1037 aa10.19□□□□□ -0.78
SF3B1-211ENST00000487698 CCDC122Q5T0U0 273 aa10.19□□□□□ -0.78
SF3B1-211ENST00000487698 MAP3K21Q5TCX8 1036 aa10.19□□□□□ -0.78
SF3B1-211ENST00000487698 CDR2LQ86X02 465 aaPredicted RBP10.19□□□□□ -0.78
SF3B1-211ENST00000487698 FAM71AQ8IYT1 594 aa10.19□□□□□ -0.78
SF3B1-211ENST00000487698 CEP120Q8N960 986 aa10.19□□□□□ -0.78
SF3B1-211ENST00000487698 OR5B17Q8NGF7 314 aa10.19□□□□□ -0.78
SF3B1-211ENST00000487698 CD99L2Q8TCZ2 262 aa10.19□□□□□ -0.78
SF3B1-211ENST00000487698 MTG1Q9BT17 334 aaPredicted RBP10.19□□□□□ -0.78
SF3B1-211ENST00000487698 TSGA10Q9BZW7 698 aa10.19□□□□□ -0.78
SF3B1-211ENST00000487698 L2HGDHQ9H9P8 463 aa10.19□□□□□ -0.78
SF3B1-211ENST00000487698 HDAC6Q9UBN7 1215 aa10.19□□□□□ -0.78
SF3B1-211ENST00000487698 ADAMTS1Q9UHI8 967 aa10.19□□□□□ -0.78
SF3B1-211ENST00000487698 GUCA1BQ9UMX6 200 aa10.19□□□□□ -0.78
SF3B1-211ENST00000487698 A0A1B0GUA9 196 aa10.19□□□□□ -0.78
SF3B1-211ENST00000487698 C17orf102A2RUQ5 167 aa10.19□□□□□ -0.78
SF3B1-211ENST00000487698 MEFVO15553 781 aaPredicted RBP10.19□□□□□ -0.78
SF3B1-211ENST00000487698 TREHO43280 583 aa10.19□□□□□ -0.78
SF3B1-211ENST00000487698 B4GALT4O60513 344 aa10.19□□□□□ -0.78
SF3B1-211ENST00000487698 PGK1P00558 417 aa10.19□□□□□ -0.78
SF3B1-211ENST00000487698 CCDC172P0C7W6 258 aa10.19□□□□□ -0.78
SF3B1-211ENST00000487698 RARBP10826 455 aa10.19□□□□□ -0.78
SF3B1-211ENST00000487698 CCND3P30281 292 aaPredicted RBP10.19□□□□□ -0.78
SF3B1-211ENST00000487698 MAGEA1P43355 309 aa10.19□□□□□ -0.78
SF3B1-211ENST00000487698 MFAP3P55082 362 aa10.19□□□□□ -0.78
SF3B1-211ENST00000487698 KIF5AQ12840 1032 aa10.19□□□□□ -0.78
SF3B1-211ENST00000487698 BMS1Q14692 1282 aaKnown RBP10.19□□□□□ -0.78
SF3B1-211ENST00000487698 SURF1Q15526 300 aa10.19□□□□□ -0.78
SF3B1-211ENST00000487698 THNSL1Q8IYQ7 743 aa10.19□□□□□ -0.78
SF3B1-211ENST00000487698 PPM1KQ8N3J5 372 aa10.19□□□□□ -0.78
SF3B1-211ENST00000487698 MYRIPQ8NFW9 859 aa10.19□□□□□ -0.78
SF3B1-211ENST00000487698 SLC30A5Q8TAD4 765 aa10.19□□□□□ -0.78
SF3B1-211ENST00000487698 SCLT1Q96NL6 688 aa10.19□□□□□ -0.78
SF3B1-211ENST00000487698 DDX3XO00571 662 aaKnown RBP eCLIP10.18□□□□□ -0.783e-10■■■■■ 34.8
SF3B1-211ENST00000487698 ERLIN2O94905 339 aa10.18□□□□□ -0.78
SF3B1-211ENST00000487698 GNRH1P01148 92 aa10.18□□□□□ -0.78
SF3B1-211ENST00000487698 HMGCRP04035 888 aa10.18□□□□□ -0.78
SF3B1-211ENST00000487698 CST5P28325 142 aaPredicted RBP10.18□□□□□ -0.78
SF3B1-211ENST00000487698 PIK3CAP42336 1068 aa10.18□□□□□ -0.78
SF3B1-211ENST00000487698 ZNF200P98182 395 aaPredicted RBP10.18□□□□□ -0.78
SF3B1-211ENST00000487698 TMEM62Q0P6H9 643 aa10.18□□□□□ -0.78
SF3B1-211ENST00000487698 PCBP1Q15365 356 aaKnown RBP eCLIP10.18□□□□□ -0.78
SF3B1-211ENST00000487698 TMEM132AQ24JP5 1023 aa10.18□□□□□ -0.78
SF3B1-211ENST00000487698 ZNF569Q5MCW4 686 aa10.18□□□□□ -0.78
SF3B1-211ENST00000487698 ENOSF1Q7L5Y1 443 aa10.18□□□□□ -0.78
SF3B1-211ENST00000487698 EFCAB13Q8IY85 973 aa10.18□□□□□ -0.78
SF3B1-211ENST00000487698 TMEM192Q8IY95 271 aa10.18□□□□□ -0.78
SF3B1-211ENST00000487698 SLC35F6Q8N357 371 aa10.18□□□□□ -0.78
SF3B1-211ENST00000487698 TXLNBQ8N3L3 684 aa10.18□□□□□ -0.78
SF3B1-211ENST00000487698 C7orf31Q8N865 590 aa10.18□□□□□ -0.78
SF3B1-211ENST00000487698 LNX1Q8TBB1 728 aaPredicted RBP10.18□□□□□ -0.78
SF3B1-211ENST00000487698 TATDN2Q93075 761 aa10.18□□□□□ -0.78
SF3B1-211ENST00000487698 CPB2Q96IY4 423 aa10.18□□□□□ -0.78
SF3B1-211ENST00000487698 FAM81BQ96LP2 452 aa10.18□□□□□ -0.78
SF3B1-211ENST00000487698 PI4K2AQ9BTU6 479 aa10.18□□□□□ -0.78
SF3B1-211ENST00000487698 GCOM2Q9BZD3 368 aaPredicted RBP10.18□□□□□ -0.78
SF3B1-211ENST00000487698 CDHR5Q9HBB8 845 aa10.18□□□□□ -0.78
SF3B1-211ENST00000487698 C1orf112Q9NSG2 853 aa10.18□□□□□ -0.78
SF3B1-211ENST00000487698 NAGPAQ9UK23 515 aa10.18□□□□□ -0.78
SF3B1-211ENST00000487698 DUSP10Q9Y6W6 482 aa10.18□□□□□ -0.78
SF3B1-211ENST00000487698 IL18RAPO95256 599 aa10.18□□□□□ -0.78
SF3B1-211ENST00000487698 CLTAP09496 248 aa10.18□□□□□ -0.78
SF3B1-211ENST00000487698 CXCL8P10145 99 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms