RNA–Protein interactions for RNA: ENST00000487670.1

TOM1-214, Transcript of target of myb1 membrane trafficking protein, humanhuman

TSL 2

Gene TOM1, Length 849 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-214ENST00000487670 GIT1Q9Y2X7 761 aa18.15■□□□□ 0.5
TOM1-214ENST00000487670 ANK1P16157 1881 aa18.15■□□□□ 0.5
TOM1-214ENST00000487670 PKD1L2Q7Z442 2459 aa18.15■□□□□ 0.5
TOM1-214ENST00000487670 KIAA1549LQ6ZVL6 1849 aa18.14■□□□□ 0.5
TOM1-214ENST00000487670 MBTD1Q05BQ5 628 aa18.14■□□□□ 0.49
TOM1-214ENST00000487670 GRIK3Q13003 919 aa18.14■□□□□ 0.49
TOM1-214ENST00000487670 SIM2Q14190 667 aaPredicted RBP18.14■□□□□ 0.49
TOM1-214ENST00000487670 DHX32Q7L7V1 743 aaKnown RBP18.14■□□□□ 0.49
TOM1-214ENST00000487670 GPR65Q8IYL9 337 aa18.14■□□□□ 0.49
TOM1-214ENST00000487670 CELF5Q8N6W0 485 aaKnown RBP18.14■□□□□ 0.49
TOM1-214ENST00000487670 CNNM3Q8NE01 707 aa18.14■□□□□ 0.49
TOM1-214ENST00000487670 SLC7A3Q8WY07 619 aa18.14■□□□□ 0.49
TOM1-214ENST00000487670 TTPALQ9BTX7 342 aa18.14■□□□□ 0.49
TOM1-214ENST00000487670 LMAN1LQ9HAT1 526 aa18.14■□□□□ 0.49
TOM1-214ENST00000487670 RBM12Q9NTZ6 932 aaKnown RBP18.14■□□□□ 0.49
TOM1-214ENST00000487670 CITO14578 2027 aa18.14■□□□□ 0.49
TOM1-214ENST00000487670 SF3B1O75533 1304 aaKnown RBP eCLIP18.14■□□□□ 0.49
TOM1-214ENST00000487670 TTLL13PA6NNM8 815 aa18.13■□□□□ 0.49
TOM1-214ENST00000487670 C1QTNF9BB2RNN3 333 aa18.13■□□□□ 0.49
TOM1-214ENST00000487670 PTGESO14684 152 aa18.13■□□□□ 0.49
TOM1-214ENST00000487670 TM4SF5O14894 197 aa18.13■□□□□ 0.49
TOM1-214ENST00000487670 NCAM2O15394 837 aa18.13■□□□□ 0.49
TOM1-214ENST00000487670 PRPF3O43395 683 aaKnown RBP18.13■□□□□ 0.49
TOM1-214ENST00000487670 XYLBO75191 536 aa18.13■□□□□ 0.49
TOM1-214ENST00000487670 RHOP08100 348 aa18.13■□□□□ 0.49
TOM1-214ENST00000487670 C1QTNF9P0C862 333 aa18.13■□□□□ 0.49
TOM1-214ENST00000487670 GNA11P29992 359 aa18.13■□□□□ 0.49
TOM1-214ENST00000487670 OR1D2P34982 312 aa18.13■□□□□ 0.49
TOM1-214ENST00000487670 USP11P51784 963 aa18.13■□□□□ 0.49
TOM1-214ENST00000487670 PTENP60484 403 aa18.13■□□□□ 0.49
TOM1-214ENST00000487670 AAMPQ13685 434 aa18.13■□□□□ 0.49
TOM1-214ENST00000487670 CAPSQ13938 189 aa18.13■□□□□ 0.49
TOM1-214ENST00000487670 NTRK3Q16288 839 aa18.13■□□□□ 0.49
TOM1-214ENST00000487670 HEATR6Q6AI08 1181 aaKnown RBP18.13■□□□□ 0.49
TOM1-214ENST00000487670 ARHGAP30Q7Z6I6 1101 aaPredicted RBP18.13■□□□□ 0.49
TOM1-214ENST00000487670 NELL2Q99435 816 aa18.13■□□□□ 0.49
TOM1-214ENST00000487670 SMOC1Q9H4F8 434 aa18.13■□□□□ 0.49
TOM1-214ENST00000487670 SH2B1Q9NRF2 756 aaPredicted RBP18.13■□□□□ 0.49
TOM1-214ENST00000487670 MRPS23Q9Y3D9 190 aaKnown RBP18.13■□□□□ 0.49
TOM1-214ENST00000487670 NID2Q14112 1375 aa18.13■□□□□ 0.49
TOM1-214ENST00000487670 SMG1Q96Q15 3661 aaKnown RBP18.13■□□□□ 0.49
TOM1-214ENST00000487670 INO80B-WBP1J3KQ70 363 aa18.12■□□□□ 0.49
TOM1-214ENST00000487670 K7ESF4 209 aa18.12■□□□□ 0.49
TOM1-214ENST00000487670 LRP3O75074 770 aa18.12■□□□□ 0.49
TOM1-214ENST00000487670 NR1I2O75469 434 aa18.12■□□□□ 0.49
TOM1-214ENST00000487670 CCR2P41597 374 aa18.12■□□□□ 0.49
TOM1-214ENST00000487670 QARSP47897 775 aaKnown RBP18.12■□□□□ 0.49
TOM1-214ENST00000487670 CREMQ03060 361 aa18.12■□□□□ 0.49
TOM1-214ENST00000487670 NAB2Q15742 525 aa18.12■□□□□ 0.49
TOM1-214ENST00000487670 Q6ZS52 159 aa18.12■□□□□ 0.49
TOM1-214ENST00000487670 FAM160A2Q8N612 972 aaPredicted RBP18.12■□□□□ 0.49
TOM1-214ENST00000487670 CCDC12Q8WUD4 166 aaPredicted RBP18.12■□□□□ 0.49
TOM1-214ENST00000487670 JPH2Q9BR39 696 aaPredicted RBP18.12■□□□□ 0.49
TOM1-214ENST00000487670 RGL1Q9NZL6 768 aa18.12■□□□□ 0.49
TOM1-214ENST00000487670 PARP2Q9UGN5 583 aa18.12■□□□□ 0.49
TOM1-214ENST00000487670 CYP3A7-CYP3A51PA0A087WV96 503 aa18.11■□□□□ 0.49
TOM1-214ENST00000487670 CHRNB1P11230 501 aa18.11■□□□□ 0.49
TOM1-214ENST00000487670 CYP3A7P24462 503 aa18.11■□□□□ 0.49
TOM1-214ENST00000487670 SHC2P98077 582 aa18.11■□□□□ 0.49
TOM1-214ENST00000487670 NPY5RQ15761 445 aa18.11■□□□□ 0.49
TOM1-214ENST00000487670 FAM78AQ5JUQ0 283 aa18.11■□□□□ 0.49
TOM1-214ENST00000487670 PRSS36Q5K4E3 855 aa18.11■□□□□ 0.49
TOM1-214ENST00000487670 VITQ6UXI7 678 aa18.11■□□□□ 0.49
TOM1-214ENST00000487670 DNASE1L2Q92874 299 aa18.11■□□□□ 0.49
TOM1-214ENST00000487670 ELSPBP1Q96BH3 223 aa18.11■□□□□ 0.49
TOM1-214ENST00000487670 ZSWIM3Q96MP5 696 aa18.11■□□□□ 0.49
TOM1-214ENST00000487670 LXNQ9BS40 222 aa18.11■□□□□ 0.49
TOM1-214ENST00000487670 SLC26A6Q9BXS9 759 aa18.11■□□□□ 0.49
TOM1-214ENST00000487670 TRIM6Q9C030 488 aaPredicted RBP18.11■□□□□ 0.49
TOM1-214ENST00000487670 KCNH3Q9ULD8 1083 aa18.11■□□□□ 0.49
TOM1-214ENST00000487670 USP20Q9Y2K6 914 aa18.11■□□□□ 0.49
TOM1-214ENST00000487670 MRPS17Q9Y2R5 130 aaKnown RBP18.11■□□□□ 0.49
TOM1-214ENST00000487670 DENND4CQ5VZ89 1909 aa18.11■□□□□ 0.49
TOM1-214ENST00000487670 ZNF638Q14966 1978 aaKnown RBP18.11■□□□□ 0.49
TOM1-214ENST00000487670 M0R2N6 131 aa18.1■□□□□ 0.49
TOM1-214ENST00000487670 POU2F2P09086 479 aa18.1■□□□□ 0.49
TOM1-214ENST00000487670 AXLP30530 894 aa18.1■□□□□ 0.49
TOM1-214ENST00000487670 CCR3P51677 355 aa18.1■□□□□ 0.49
TOM1-214ENST00000487670 NRLP54845 237 aa18.1■□□□□ 0.49
TOM1-214ENST00000487670 TUSC3Q13454 348 aa18.1■□□□□ 0.49
TOM1-214ENST00000487670 RAB33AQ14088 237 aa18.1■□□□□ 0.49
TOM1-214ENST00000487670 CD300LGQ6UXG3 332 aa18.1■□□□□ 0.49
TOM1-214ENST00000487670 FAM3CQ92520 227 aa18.1■□□□□ 0.49
TOM1-214ENST00000487670 CCDC51Q96ER9 411 aa18.1■□□□□ 0.49
TOM1-214ENST00000487670 BRD9Q9H8M2 597 aa18.1■□□□□ 0.49
TOM1-214ENST00000487670 NCOA5Q9HCD5 579 aaKnown RBP18.1■□□□□ 0.49
TOM1-214ENST00000487670 ZNF334Q9HCZ1 680 aaPredicted RBP18.1■□□□□ 0.49
TOM1-214ENST00000487670 ZMIZ1Q9ULJ6 1067 aa18.1■□□□□ 0.49
TOM1-214ENST00000487670 CDY1Q9Y6F8 540 aa18.1■□□□□ 0.49
TOM1-214ENST00000487670 PIAS3Q9Y6X2 628 aa18.1■□□□□ 0.49
TOM1-214ENST00000487670 FREM2Q5SZK8 3169 aa18.09■□□□□ 0.49
TOM1-214ENST00000487670 I3L4J1 428 aa18.09■□□□□ 0.49
TOM1-214ENST00000487670 EDN1P05305 212 aa18.09■□□□□ 0.49
TOM1-214ENST00000487670 PROS1P07225 676 aa18.09■□□□□ 0.49
TOM1-214ENST00000487670 GDI1P31150 447 aa18.09■□□□□ 0.49
TOM1-214ENST00000487670 YWHABP31946 246 aaKnown RBP18.09■□□□□ 0.49
TOM1-214ENST00000487670 RFC5P40937 340 aa18.09■□□□□ 0.49
TOM1-214ENST00000487670 SOX9P48436 509 aa18.09■□□□□ 0.49
TOM1-214ENST00000487670 CYP4A11Q02928 519 aa18.09■□□□□ 0.49
TOM1-214ENST00000487670 PPP2R5CQ13362 524 aa18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 106.6 ms