RNA–Protein interactions for RNA: ENST00000487633.1

COL4A3-206, Transcript of collagen type IV alpha 3 chain, humanhuman

TSL 3

Gene COL4A3, Length 524 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-206ENST00000487633 SPECC1L-ADORA2AF8WAN1 911 aa6.59□□□□□ -1.35
COL4A3-206ENST00000487633 ARHGAP6O43182 974 aa6.59□□□□□ -1.35
COL4A3-206ENST00000487633 HNRNPA1P09651 372 aaKnown RBP eCLIP6.59□□□□□ -1.35
COL4A3-206ENST00000487633 PSMC3P17980 439 aa6.59□□□□□ -1.35
COL4A3-206ENST00000487633 ITPKBP27987 946 aa6.59□□□□□ -1.35
COL4A3-206ENST00000487633 HOXA6P31267 233 aa6.59□□□□□ -1.35
COL4A3-206ENST00000487633 KIF5BP33176 963 aa6.59□□□□□ -1.35
COL4A3-206ENST00000487633 MAPK8P45983 427 aa6.59□□□□□ -1.35
COL4A3-206ENST00000487633 USP41Q3LFD5 358 aa6.59□□□□□ -1.35
COL4A3-206ENST00000487633 FAM160B1Q5W0V3 765 aa6.59□□□□□ -1.35
COL4A3-206ENST00000487633 MIS18BP1Q6P0N0 1132 aa6.59□□□□□ -1.35
COL4A3-206ENST00000487633 CD300LGQ6UXG3 332 aa6.59□□□□□ -1.35
COL4A3-206ENST00000487633 FAM43BQ6ZT52 329 aaPredicted RBP6.59□□□□□ -1.35
COL4A3-206ENST00000487633 CEP57Q86XR8 500 aa6.59□□□□□ -1.35
COL4A3-206ENST00000487633 RHPN2Q8IUC4 686 aa6.59□□□□□ -1.35
COL4A3-206ENST00000487633 CCDC82Q8N4S0 544 aa6.59□□□□□ -1.35
COL4A3-206ENST00000487633 DAGLBQ8NCG7 672 aa6.59□□□□□ -1.35
COL4A3-206ENST00000487633 URGCPQ8TCY9 931 aa6.59□□□□□ -1.35
COL4A3-206ENST00000487633 EZH1Q92800 747 aaPredicted RBP6.59□□□□□ -1.35
COL4A3-206ENST00000487633 TNPO1Q92973 898 aaKnown RBP6.59□□□□□ -1.35
COL4A3-206ENST00000487633 EVI5LQ96CN4 794 aa6.59□□□□□ -1.35
COL4A3-206ENST00000487633 CPB2Q96IY4 423 aa6.59□□□□□ -1.35
COL4A3-206ENST00000487633 UBAC1Q9BSL1 405 aa6.59□□□□□ -1.35
COL4A3-206ENST00000487633 IER2Q9BTL4 223 aa6.59□□□□□ -1.35
COL4A3-206ENST00000487633 APOL6Q9BWW8 343 aa6.59□□□□□ -1.35
COL4A3-206ENST00000487633 GCOM2Q9BZD3 368 aaPredicted RBP6.59□□□□□ -1.35
COL4A3-206ENST00000487633 ZFP14Q9HCL3 533 aa6.59□□□□□ -1.35
COL4A3-206ENST00000487633 AGPAT5Q9NUQ2 364 aa6.59□□□□□ -1.35
COL4A3-206ENST00000487633 KLK14Q9P0G3 267 aa6.59□□□□□ -1.35
COL4A3-206ENST00000487633 ADAM28Q9UKQ2 775 aa6.59□□□□□ -1.35
COL4A3-206ENST00000487633 PTPN13Q12923 2485 aa6.59□□□□□ -1.35
COL4A3-206ENST00000487633 PTPRQQ9UMZ3 2332 aa6.59□□□□□ -1.36
COL4A3-206ENST00000487633 RELNP78509 3460 aa6.59□□□□□ -1.36
COL4A3-206ENST00000487633 IGKV6-21A0A0C4DH24 114 aa6.58□□□□□ -1.36
COL4A3-206ENST00000487633 MYBPHLA2RUH7 354 aa6.58□□□□□ -1.36
COL4A3-206ENST00000487633 HEPACAM2A8MVW5 462 aa6.58□□□□□ -1.36
COL4A3-206ENST00000487633 MAGEB2O15479 319 aa6.58□□□□□ -1.36
COL4A3-206ENST00000487633 KIF4AO95239 1232 aa6.58□□□□□ -1.36
COL4A3-206ENST00000487633 SEC24AO95486 1093 aa6.58□□□□□ -1.36
COL4A3-206ENST00000487633 OATP04181 439 aa6.58□□□□□ -1.36
COL4A3-206ENST00000487633 AKAP5P24588 427 aa6.58□□□□□ -1.36
COL4A3-206ENST00000487633 U2AF2P26368 475 aaKnown RBP eCLIP6.58□□□□□ -1.36
COL4A3-206ENST00000487633 HOXA9P31269 272 aa6.58□□□□□ -1.36
COL4A3-206ENST00000487633 CTHP32929 405 aa6.58□□□□□ -1.36
COL4A3-206ENST00000487633 OR1D2P34982 312 aa6.58□□□□□ -1.36
COL4A3-206ENST00000487633 PRKCEQ02156 737 aa6.58□□□□□ -1.36
COL4A3-206ENST00000487633 SEMA3BQ13214 749 aa6.58□□□□□ -1.36
COL4A3-206ENST00000487633 PSMD5Q16401 504 aa6.58□□□□□ -1.36
COL4A3-206ENST00000487633 MTERF2Q49AM1 385 aa6.58□□□□□ -1.36
COL4A3-206ENST00000487633 CCDC178Q5BJE1 867 aa6.58□□□□□ -1.36
COL4A3-206ENST00000487633 LIN9Q5TKA1 542 aa6.58□□□□□ -1.36
COL4A3-206ENST00000487633 FAM171A1Q5VUB5 890 aa6.58□□□□□ -1.36
COL4A3-206ENST00000487633 FSTL4Q6MZW2 842 aa6.58□□□□□ -1.36
COL4A3-206ENST00000487633 CCNI2Q6ZMN8 369 aaPredicted RBP6.58□□□□□ -1.36
COL4A3-206ENST00000487633 CATSPER4Q7RTX7 472 aa6.58□□□□□ -1.36
COL4A3-206ENST00000487633 ZNF605Q86T29 641 aa6.58□□□□□ -1.36
COL4A3-206ENST00000487633 PLA2G4DQ86XP0 818 aa6.58□□□□□ -1.36
COL4A3-206ENST00000487633 TMEM130Q8N3G9 435 aa6.58□□□□□ -1.36
COL4A3-206ENST00000487633 CRYGNQ8WXF5 182 aa6.58□□□□□ -1.36
COL4A3-206ENST00000487633 IRF7Q92985 503 aa6.58□□□□□ -1.36
COL4A3-206ENST00000487633 NLRP4Q96MN2 994 aa6.58□□□□□ -1.36
COL4A3-206ENST00000487633 CORO1BQ9BR76 489 aa6.58□□□□□ -1.36
COL4A3-206ENST00000487633 SPZ1Q9BXG8 430 aa6.58□□□□□ -1.36
COL4A3-206ENST00000487633 ANO3Q9BYT9 981 aa6.58□□□□□ -1.36
COL4A3-206ENST00000487633 NXF3Q9H4D5 531 aaKnown RBP6.58□□□□□ -1.36
COL4A3-206ENST00000487633 TRPV5Q9NQA5 729 aa6.58□□□□□ -1.36
COL4A3-206ENST00000487633 BMP2KQ9NSY1 1161 aaPredicted RBP6.58□□□□□ -1.36
COL4A3-206ENST00000487633 GDE1Q9NZC3 331 aa6.58□□□□□ -1.36
COL4A3-206ENST00000487633 DPP7Q9UHL4 492 aa6.58□□□□□ -1.36
COL4A3-206ENST00000487633 KCNH3Q9ULD8 1083 aa6.58□□□□□ -1.36
COL4A3-206ENST00000487633 SSX2IPQ9Y2D8 614 aa6.58□□□□□ -1.36
COL4A3-206ENST00000487633 PCDHB15Q9Y5E8 787 aa6.58□□□□□ -1.36
COL4A3-206ENST00000487633 DENND4CQ5VZ89 1909 aa6.58□□□□□ -1.36
COL4A3-206ENST00000487633 DOPEY2Q9Y3R5 2298 aa6.57□□□□□ -1.36
COL4A3-206ENST00000487633 BSNQ9UPA5 3926 aa6.57□□□□□ -1.36
COL4A3-206ENST00000487633 CCDC194A0A1B0GVG4 234 aa6.57□□□□□ -1.36
COL4A3-206ENST00000487633 CASTOR2A6NHX0 329 aa6.57□□□□□ -1.36
COL4A3-206ENST00000487633 SPDYE3A6NKU9 549 aa6.57□□□□□ -1.36
COL4A3-206ENST00000487633 I3L4J1 428 aa6.57□□□□□ -1.36
COL4A3-206ENST00000487633 IPO5O00410 1097 aaKnown RBP6.57□□□□□ -1.36
COL4A3-206ENST00000487633 IFIT3O14879 490 aaKnown RBP6.57□□□□□ -1.36
COL4A3-206ENST00000487633 C1RP00736 705 aa6.57□□□□□ -1.36
COL4A3-206ENST00000487633 EGFP01133 1207 aa6.57□□□□□ -1.36
COL4A3-206ENST00000487633 ITGA4P13612 1032 aa6.57□□□□□ -1.36
COL4A3-206ENST00000487633 SFPQP23246 707 aaKnown RBP eCLIP6.57□□□□□ -1.36
COL4A3-206ENST00000487633 RAB27AP51159 221 aa6.57□□□□□ -1.36
COL4A3-206ENST00000487633 CACNB1Q02641 598 aaPredicted RBP6.57□□□□□ -1.36
COL4A3-206ENST00000487633 TEAD2Q15562 447 aa6.57□□□□□ -1.36
COL4A3-206ENST00000487633 NAB2Q15742 525 aa6.57□□□□□ -1.36
COL4A3-206ENST00000487633 WWC2Q6AWC2 1192 aa6.57□□□□□ -1.36
COL4A3-206ENST00000487633 CWC27Q6UX04 472 aaKnown RBP6.57□□□□□ -1.36
COL4A3-206ENST00000487633 SLCO6A1Q86UG4 719 aa6.57□□□□□ -1.36
COL4A3-206ENST00000487633 PIP4K2CQ8TBX8 421 aa6.57□□□□□ -1.36
COL4A3-206ENST00000487633 IGDCC4Q8TDY8 1250 aa6.57□□□□□ -1.36
COL4A3-206ENST00000487633 PIK3R5Q8WYR1 880 aa6.57□□□□□ -1.36
COL4A3-206ENST00000487633 LENG9Q96B70 501 aa6.57□□□□□ -1.36
COL4A3-206ENST00000487633 PGBD4Q96DM1 585 aa6.57□□□□□ -1.36
COL4A3-206ENST00000487633 RRP36Q96EU6 259 aaKnown RBP6.57□□□□□ -1.36
COL4A3-206ENST00000487633 TPSD1Q9BZJ3 242 aa6.57□□□□□ -1.36
COL4A3-206ENST00000487633 SEMA4CQ9C0C4 833 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms