RNA–Protein interactions for RNA: ENST00000487244.5

UBE4B-209, Transcript of ubiquitination factor E4B, humanhuman

TSL 1 (best)

Gene UBE4B, Length 818 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-209ENST00000487244 DNM1Q05193 864 aaKnown RBP7.88□□□□□ -1.15
UBE4B-209ENST00000487244 RNASELQ05823 741 aaKnown RBP7.88□□□□□ -1.15
UBE4B-209ENST00000487244 DMP1Q13316 513 aaPredicted RBP7.88□□□□□ -1.15
UBE4B-209ENST00000487244 STK38Q15208 465 aa7.88□□□□□ -1.15
UBE4B-209ENST00000487244 TMEM132AQ24JP5 1023 aa7.88□□□□□ -1.15
UBE4B-209ENST00000487244 CEP120Q8N960 986 aa7.88□□□□□ -1.15
UBE4B-209ENST00000487244 GSTCDQ8NEC7 633 aa7.88□□□□□ -1.15
UBE4B-209ENST00000487244 PGBD4Q96DM1 585 aa7.88□□□□□ -1.15
UBE4B-209ENST00000487244 PRIMPOLQ96LW4 560 aa7.88□□□□□ -1.15
UBE4B-209ENST00000487244 DRC1Q96MC2 740 aa7.88□□□□□ -1.15
UBE4B-209ENST00000487244 ASB2Q96Q27 587 aa7.88□□□□□ -1.15
UBE4B-209ENST00000487244 MRPL9Q9BYD2 267 aaKnown RBP7.88□□□□□ -1.15
UBE4B-209ENST00000487244 PANK2Q9BZ23 570 aa7.88□□□□□ -1.15
UBE4B-209ENST00000487244 TRIM6Q9C030 488 aaPredicted RBP7.88□□□□□ -1.15
UBE4B-209ENST00000487244 LMAN2LQ9H0V9 348 aa7.88□□□□□ -1.15
UBE4B-209ENST00000487244 KMT5AQ9NQR1 393 aa7.88□□□□□ -1.15
UBE4B-209ENST00000487244 AAASQ9NRG9 546 aa7.88□□□□□ -1.15
UBE4B-209ENST00000487244 MIOSQ9NXC5 875 aa7.88□□□□□ -1.15
UBE4B-209ENST00000487244 SPG21Q9NZD8 308 aa7.88□□□□□ -1.15
UBE4B-209ENST00000487244 MORC2Q9Y6X9 1032 aaPredicted RBP7.88□□□□□ -1.15
UBE4B-209ENST00000487244 PLXNA3P51805 1871 aa7.87□□□□□ -1.15
UBE4B-209ENST00000487244 HIDE1A8MVS5 230 aa7.87□□□□□ -1.15
UBE4B-209ENST00000487244 H3BQ06 376 aaPredicted RBP7.87□□□□□ -1.15
UBE4B-209ENST00000487244 K7ERI5 159 aa7.87□□□□□ -1.15
UBE4B-209ENST00000487244 ABLIM1O14639 778 aa7.87□□□□□ -1.15
UBE4B-209ENST00000487244 PTGESO14684 152 aa7.87□□□□□ -1.15
UBE4B-209ENST00000487244 FSCN2O14926 492 aa7.87□□□□□ -1.15
UBE4B-209ENST00000487244 N4BP3O15049 544 aa7.87□□□□□ -1.15
UBE4B-209ENST00000487244 INPPL1O15357 1258 aa7.87□□□□□ -1.15
UBE4B-209ENST00000487244 SLC26A4O43511 780 aa7.87□□□□□ -1.15
UBE4B-209ENST00000487244 TBX10O75333 385 aa7.87□□□□□ -1.15
UBE4B-209ENST00000487244 RECQL4O94761 1208 aa7.87□□□□□ -1.15
UBE4B-209ENST00000487244 YEATS4O95619 227 aa7.87□□□□□ -1.15
UBE4B-209ENST00000487244 GALTP07902 379 aa7.87□□□□□ -1.15
UBE4B-209ENST00000487244 MAPTP10636 758 aaKnown RBP7.87□□□□□ -1.15
UBE4B-209ENST00000487244 KCNA5P22460 613 aa7.87□□□□□ -1.15
UBE4B-209ENST00000487244 LTBRP36941 435 aa7.87□□□□□ -1.15
UBE4B-209ENST00000487244 NRIP1P48552 1158 aa7.87□□□□□ -1.15
UBE4B-209ENST00000487244 WNT7BP56706 349 aa7.87□□□□□ -1.15
UBE4B-209ENST00000487244 PLCB3Q01970 1234 aa7.87□□□□□ -1.15
UBE4B-209ENST00000487244 DLX2Q07687 328 aaPredicted RBP7.87□□□□□ -1.15
UBE4B-209ENST00000487244 DSC1Q08554 894 aa7.87□□□□□ -1.15
UBE4B-209ENST00000487244 NCBP1Q09161 790 aaKnown RBP7.87□□□□□ -1.15
UBE4B-209ENST00000487244 GIT2Q14161 759 aa7.87□□□□□ -1.15
UBE4B-209ENST00000487244 COL19A1Q14993 1142 aa7.87□□□□□ -1.15
UBE4B-209ENST00000487244 AXDND1Q5T1B0 1012 aaPredicted RBP7.87□□□□□ -1.15
UBE4B-209ENST00000487244 ATF7IP2Q5U623 682 aa7.87□□□□□ -1.15
UBE4B-209ENST00000487244 PLPP4Q5VZY2 271 aa7.87□□□□□ -1.15
UBE4B-209ENST00000487244 SHC4Q6S5L8 630 aa7.87□□□□□ -1.15
UBE4B-209ENST00000487244 EP400NLQ6ZTU2 488 aa7.87□□□□□ -1.15
UBE4B-209ENST00000487244 ZBTB33Q86T24 672 aa7.87□□□□□ -1.15
UBE4B-209ENST00000487244 RBM23Q86U06 439 aaKnown RBP7.87□□□□□ -1.15
UBE4B-209ENST00000487244 PDILTQ8N807 584 aa7.87□□□□□ -1.15
UBE4B-209ENST00000487244 TMEM161BQ8NDZ6 487 aa7.87□□□□□ -1.15
UBE4B-209ENST00000487244 VN1R2Q8NFZ6 395 aa7.87□□□□□ -1.15
UBE4B-209ENST00000487244 URGCPQ8TCY9 931 aa7.87□□□□□ -1.15
UBE4B-209ENST00000487244 AUTS2Q8WXX7 1259 aa7.87□□□□□ -1.15
UBE4B-209ENST00000487244 MRPS27Q92552 414 aaKnown RBP7.87□□□□□ -1.15
UBE4B-209ENST00000487244 LARP4BQ92615 738 aaKnown RBP7.87□□□□□ -1.15
UBE4B-209ENST00000487244 RABGGTAQ92696 567 aa7.87□□□□□ -1.15
UBE4B-209ENST00000487244 ZNF396Q96N95 335 aaPredicted RBP7.87□□□□□ -1.15
UBE4B-209ENST00000487244 NECAB3Q96P71 396 aaPredicted RBP7.87□□□□□ -1.15
UBE4B-209ENST00000487244 TIPINQ9BVW5 301 aa7.87□□□□□ -1.15
UBE4B-209ENST00000487244 TARS2Q9BW92 718 aaKnown RBP7.87□□□□□ -1.15
UBE4B-209ENST00000487244 COL25A1Q9BXS0 654 aaPredicted RBP7.87□□□□□ -1.15
UBE4B-209ENST00000487244 CDT1Q9H211 546 aa7.87□□□□□ -1.15
UBE4B-209ENST00000487244 IGFLR1Q9H665 355 aa7.87□□□□□ -1.15
UBE4B-209ENST00000487244 UBE2ZQ9H832 354 aaPredicted RBP7.87□□□□□ -1.15
UBE4B-209ENST00000487244 PTPRHQ9HD43 1115 aa7.87□□□□□ -1.15
UBE4B-209ENST00000487244 TLR9Q9NR96 1032 aa7.87□□□□□ -1.15
UBE4B-209ENST00000487244 SNTG2Q9NY99 539 aa7.87□□□□□ -1.15
UBE4B-209ENST00000487244 KCND2Q9NZV8 630 aa7.87□□□□□ -1.15
UBE4B-209ENST00000487244 PARP2Q9UGN5 583 aa7.87□□□□□ -1.15
UBE4B-209ENST00000487244 GDAQ9Y2T3 454 aa7.87□□□□□ -1.15
UBE4B-209ENST00000487244 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP7.86□□□□□ -1.15
UBE4B-209ENST00000487244 MYMKA6NI61 221 aa7.86□□□□□ -1.15
UBE4B-209ENST00000487244 PER2O15055 1255 aa7.86□□□□□ -1.15
UBE4B-209ENST00000487244 MEFVO15553 781 aaPredicted RBP7.86□□□□□ -1.15
UBE4B-209ENST00000487244 BRD1O95696 1058 aa7.86□□□□□ -1.15
UBE4B-209ENST00000487244 GLP2RO95838 553 aa7.86□□□□□ -1.15
UBE4B-209ENST00000487244 BMP1P13497 986 aa7.86□□□□□ -1.15
UBE4B-209ENST00000487244 IGFBP6P24592 240 aaPredicted RBP7.86□□□□□ -1.15
UBE4B-209ENST00000487244 DDIT3P35638 169 aa7.86□□□□□ -1.15
UBE4B-209ENST00000487244 PPM1AP35813 382 aa7.86□□□□□ -1.15
UBE4B-209ENST00000487244 STAT6P42226 847 aa7.86□□□□□ -1.15
UBE4B-209ENST00000487244 ALDH7A1P49419 539 aaKnown RBP7.86□□□□□ -1.15
UBE4B-209ENST00000487244 ZNF131P52739 623 aa7.86□□□□□ -1.15
UBE4B-209ENST00000487244 NCKAP1LP55160 1127 aa7.86□□□□□ -1.15
UBE4B-209ENST00000487244 OSTNP61366 133 aa7.86□□□□□ -1.15
UBE4B-209ENST00000487244 MRPS5P82675 430 aaKnown RBP7.86□□□□□ -1.15
UBE4B-209ENST00000487244 UBE3AQ05086 875 aa7.86□□□□□ -1.15
UBE4B-209ENST00000487244 CLUL1Q15846 466 aa7.86□□□□□ -1.15
UBE4B-209ENST00000487244 CTC1Q2NKJ3 1217 aa7.86□□□□□ -1.15
UBE4B-209ENST00000487244 ZNF568Q3ZCX4 644 aa7.86□□□□□ -1.15
UBE4B-209ENST00000487244 SEZ6Q53EL9 994 aa7.86□□□□□ -1.15
UBE4B-209ENST00000487244 GLRA4Q5JXX5 417 aa7.86□□□□□ -1.15
UBE4B-209ENST00000487244 RRAGBQ5VZM2 374 aa7.86□□□□□ -1.15
UBE4B-209ENST00000487244 DYMQ7RTS9 669 aa7.86□□□□□ -1.15
UBE4B-209ENST00000487244 COLGALT2Q8IYK4 626 aa7.86□□□□□ -1.15
UBE4B-209ENST00000487244 CYP4X1Q8N118 509 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms