RNA–Protein interactions for RNA: ENST00000487193.1

ATPAF1-205, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 5

Gene ATPAF1, Length 513 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-205ENST00000487193 C1orf228Q6PIY5 440 aa13.68□□□□□ -0.22
ATPAF1-205ENST00000487193 CCNI2Q6ZMN8 369 aaPredicted RBP13.68□□□□□ -0.22
ATPAF1-205ENST00000487193 RHPN2Q8IUC4 686 aa13.68□□□□□ -0.22
ATPAF1-205ENST00000487193 MFSD6LQ8IWD5 586 aa13.68□□□□□ -0.22
ATPAF1-205ENST00000487193 SYNPOQ8N3V7 929 aa13.68□□□□□ -0.22
ATPAF1-205ENST00000487193 HASPINQ8TF76 798 aa13.68□□□□□ -0.22
ATPAF1-205ENST00000487193 DEPDC1BQ8WUY9 529 aa13.68□□□□□ -0.22
ATPAF1-205ENST00000487193 SMARCD2Q92925 531 aa13.68□□□□□ -0.22
ATPAF1-205ENST00000487193 MSANTD3Q96H12 275 aa13.68□□□□□ -0.22
ATPAF1-205ENST00000487193 FAM167AQ96KS9 214 aa13.68□□□□□ -0.22
ATPAF1-205ENST00000487193 ZFP42Q96MM3 310 aa13.68□□□□□ -0.22
ATPAF1-205ENST00000487193 HHIPQ96QV1 700 aa13.68□□□□□ -0.22
ATPAF1-205ENST00000487193 TTPALQ9BTX7 342 aa13.68□□□□□ -0.22
ATPAF1-205ENST00000487193 DCTPP1Q9H773 170 aa13.68□□□□□ -0.22
ATPAF1-205ENST00000487193 UBN1Q9NPG3 1134 aa13.68□□□□□ -0.22
ATPAF1-205ENST00000487193 CACNG4Q9UBN1 327 aa13.68□□□□□ -0.22
ATPAF1-205ENST00000487193 TCEAL9Q9UHQ7 104 aa13.68□□□□□ -0.22
ATPAF1-205ENST00000487193 SAMM50Q9Y512 469 aa13.68□□□□□ -0.22
ATPAF1-205ENST00000487193 NCANO14594 1321 aa13.67□□□□□ -0.22
ATPAF1-205ENST00000487193 THADAQ6YHU6 1953 aa13.67□□□□□ -0.22
ATPAF1-205ENST00000487193 CCDC194A0A1B0GVG4 234 aa13.67□□□□□ -0.22
ATPAF1-205ENST00000487193 MYBPHLA2RUH7 354 aa13.67□□□□□ -0.22
ATPAF1-205ENST00000487193 HEPACAM2A8MVW5 462 aa13.67□□□□□ -0.22
ATPAF1-205ENST00000487193 MX1P20591 662 aa13.67□□□□□ -0.22
ATPAF1-205ENST00000487193 PRSS36Q5K4E3 855 aa13.67□□□□□ -0.22
ATPAF1-205ENST00000487193 FAM171A1Q5VUB5 890 aa13.67□□□□□ -0.22
ATPAF1-205ENST00000487193 CYP2U1Q7Z449 544 aa13.67□□□□□ -0.22
ATPAF1-205ENST00000487193 GPIHBP1Q8IV16 184 aa13.67□□□□□ -0.22
ATPAF1-205ENST00000487193 PNPLA1Q8N8W4 532 aa13.67□□□□□ -0.22
ATPAF1-205ENST00000487193 SMG8Q8ND04 991 aaKnown RBP13.67□□□□□ -0.22
ATPAF1-205ENST00000487193 PIGKQ92643 395 aa13.67□□□□□ -0.22
ATPAF1-205ENST00000487193 NLRP4Q96MN2 994 aa13.67□□□□□ -0.22
ATPAF1-205ENST00000487193 CNNM2Q9H8M5 875 aa13.67□□□□□ -0.22
ATPAF1-205ENST00000487193 AGPAT5Q9NUQ2 364 aa13.67□□□□□ -0.22
ATPAF1-205ENST00000487193 URB1O60287 2271 aaKnown RBP13.66□□□□□ -0.22
ATPAF1-205ENST00000487193 ABCA7Q8IZY2 2146 aa13.66□□□□□ -0.22
ATPAF1-205ENST00000487193 hCG_1642624A0A1W2PR95 340 aa13.66□□□□□ -0.22
ATPAF1-205ENST00000487193 OATP04181 439 aa13.66□□□□□ -0.22
ATPAF1-205ENST00000487193 MS4A1P11836 297 aa13.66□□□□□ -0.22
ATPAF1-205ENST00000487193 CTHP32929 405 aa13.66□□□□□ -0.22
ATPAF1-205ENST00000487193 CCR2P41597 374 aa13.66□□□□□ -0.22
ATPAF1-205ENST00000487193 DNM2P50570 870 aa13.66□□□□□ -0.22
ATPAF1-205ENST00000487193 KCNC4Q03721 635 aa13.66□□□□□ -0.22
ATPAF1-205ENST00000487193 SEMA3BQ13214 749 aa13.66□□□□□ -0.22
ATPAF1-205ENST00000487193 RALGPS2Q86X27 583 aaPredicted RBP13.66□□□□□ -0.22
ATPAF1-205ENST00000487193 PLA2G4DQ86XP0 818 aa13.66□□□□□ -0.22
ATPAF1-205ENST00000487193 PIP4K2CQ8TBX8 421 aa13.66□□□□□ -0.22
ATPAF1-205ENST00000487193 AVENQ9NQS1 362 aaPredicted RBP13.66□□□□□ -0.22
ATPAF1-205ENST00000487193 SUCLA2Q9P2R7 463 aaPredicted RBP13.66□□□□□ -0.22
ATPAF1-205ENST00000487193 HES2Q9Y543 173 aa13.66□□□□□ -0.22
ATPAF1-205ENST00000487193 PCDHA10Q9Y5I2 948 aa13.66□□□□□ -0.22
ATPAF1-205ENST00000487193 VWA8A3KMH1 1905 aa13.66□□□□□ -0.22
ATPAF1-205ENST00000487193 SF3B1O75533 1304 aaKnown RBP eCLIP13.65□□□□□ -0.22
ATPAF1-205ENST00000487193 IPO5O00410 1097 aaKnown RBP13.65□□□□□ -0.22
ATPAF1-205ENST00000487193 IFIT3O14879 490 aaKnown RBP13.65□□□□□ -0.22
ATPAF1-205ENST00000487193 ATG13O75143 517 aa13.65□□□□□ -0.22
ATPAF1-205ENST00000487193 LRG1P02750 347 aa13.65□□□□□ -0.22
ATPAF1-205ENST00000487193 DHPSP49366 369 aaPredicted RBP13.65□□□□□ -0.22
ATPAF1-205ENST00000487193 SRSF1Q07955 248 aaKnown RBP eCLIP13.65□□□□□ -0.22
ATPAF1-205ENST00000487193 LMAN2Q12907 356 aa13.65□□□□□ -0.22
ATPAF1-205ENST00000487193 RAB33AQ14088 237 aa13.65□□□□□ -0.22
ATPAF1-205ENST00000487193 KARSQ15046 597 aaKnown RBP13.65□□□□□ -0.22
ATPAF1-205ENST00000487193 IMMTQ16891 758 aaKnown RBP13.65□□□□□ -0.22
ATPAF1-205ENST00000487193 TRIM61Q5EBN2 209 aa13.65□□□□□ -0.22
ATPAF1-205ENST00000487193 CMTR1Q8N1G2 835 aaKnown RBP13.65□□□□□ -0.22
ATPAF1-205ENST00000487193 CAMKK1Q8N5S9 505 aa13.65□□□□□ -0.22
ATPAF1-205ENST00000487193 ZSCAN18Q8TBC5 510 aaPredicted RBP13.65□□□□□ -0.22
ATPAF1-205ENST00000487193 DCBLD2Q96PD2 775 aa13.65□□□□□ -0.22
ATPAF1-205ENST00000487193 NUSAP1Q9BXS6 441 aaKnown RBP13.65□□□□□ -0.22
ATPAF1-205ENST00000487193 SNTG2Q9NY99 539 aa13.65□□□□□ -0.22
ATPAF1-205ENST00000487193 GTSE1Q9NYZ3 720 aa13.65□□□□□ -0.22
ATPAF1-205ENST00000487193 MBD1Q9UIS9 605 aaPredicted RBP13.65□□□□□ -0.22
ATPAF1-205ENST00000487193 IPPQ9Y573 584 aa13.65□□□□□ -0.22
ATPAF1-205ENST00000487193 CACNA1EQ15878 2313 aa13.65□□□□□ -0.22
ATPAF1-205ENST00000487193 KIF26AQ9ULI4 1882 aaPredicted RBP13.65□□□□□ -0.22
ATPAF1-205ENST00000487193 ZNF462Q96JM2 2506 aa13.64□□□□□ -0.23
ATPAF1-205ENST00000487193 ZNF197O14709 1029 aa13.64□□□□□ -0.23
ATPAF1-205ENST00000487193 CHADO15335 359 aa13.64□□□□□ -0.23
ATPAF1-205ENST00000487193 GJA1P17302 382 aa13.64□□□□□ -0.23
ATPAF1-205ENST00000487193 ENGP17813 658 aa13.64□□□□□ -0.23
ATPAF1-205ENST00000487193 HOXA11P31270 313 aaPredicted RBP13.64□□□□□ -0.23
ATPAF1-205ENST00000487193 MFAP1P55081 439 aaKnown RBP13.64□□□□□ -0.23
ATPAF1-205ENST00000487193 PRKCEQ02156 737 aa13.64□□□□□ -0.23
ATPAF1-205ENST00000487193 MTERF2Q49AM1 385 aa13.64□□□□□ -0.23
ATPAF1-205ENST00000487193 ZNF746Q6NUN9 644 aaPredicted RBP13.64□□□□□ -0.23
ATPAF1-205ENST00000487193 PDZD4Q76G19 769 aaPredicted RBP13.64□□□□□ -0.23
ATPAF1-205ENST00000487193 ZNF410Q86VK4 478 aa13.64□□□□□ -0.23
ATPAF1-205ENST00000487193 ZFYVE19Q96K21 471 aa13.64□□□□□ -0.23
ATPAF1-205ENST00000487193 SH2D3AQ9BRG2 576 aa13.64□□□□□ -0.23
ATPAF1-205ENST00000487193 PAAF1Q9BRP4 392 aa13.64□□□□□ -0.23
ATPAF1-205ENST00000487193 ZNF577Q9BSK1 485 aa13.64□□□□□ -0.23
ATPAF1-205ENST00000487193 SPZ1Q9BXG8 430 aa13.64□□□□□ -0.23
ATPAF1-205ENST00000487193 EIF2AQ9BY44 585 aaKnown RBP13.64□□□□□ -0.23
ATPAF1-205ENST00000487193 CHMP4BQ9H444 224 aaKnown RBP13.64□□□□□ -0.23
ATPAF1-205ENST00000487193 ACACAQ13085 2346 aa13.64□□□□□ -0.23
ATPAF1-205ENST00000487193 ADAMTS9Q9P2N4 1935 aa13.64□□□□□ -0.23
ATPAF1-205ENST00000487193 ERICH2A1L162 156 aa13.63□□□□□ -0.23
ATPAF1-205ENST00000487193 CYP4F3Q08477 520 aa13.63□□□□□ -0.23
ATPAF1-205ENST00000487193 HSP90AA2PQ14568 343 aaPredicted RBP13.63□□□□□ -0.23
ATPAF1-205ENST00000487193 PMS2CLQ68D20 193 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms