RNA–Protein interactions for RNA: ENST00000487118.1

NUDCD3-209, Transcript of NudC domain containing 3, humanhuman

TSL 3

Gene NUDCD3, Length 314 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-209ENST00000487118 SLC9C1Q4G0N8 1177 aa9.31□□□□□ -0.92
NUDCD3-209ENST00000487118 HGSNATQ68CP4 663 aa9.31□□□□□ -0.92
NUDCD3-209ENST00000487118 PHLDB3Q6NSJ2 640 aa9.31□□□□□ -0.92
NUDCD3-209ENST00000487118 TAF2Q6P1X5 1199 aa9.31□□□□□ -0.92
NUDCD3-209ENST00000487118 CXCL17Q6UXB2 119 aa9.31□□□□□ -0.92
NUDCD3-209ENST00000487118 SV2AQ7L0J3 742 aa9.31□□□□□ -0.92
NUDCD3-209ENST00000487118 ZBTB33Q86T24 672 aa9.31□□□□□ -0.92
NUDCD3-209ENST00000487118 ALYREFQ86V81 257 aaKnown RBP9.31□□□□□ -0.92
NUDCD3-209ENST00000487118 NME8Q8N427 588 aa9.31□□□□□ -0.92
NUDCD3-209ENST00000487118 C7orf31Q8N865 590 aa9.31□□□□□ -0.92
NUDCD3-209ENST00000487118 DNAJB3Q8WWF6 145 aa9.31□□□□□ -0.92
NUDCD3-209ENST00000487118 ZNF516Q92618 1163 aa9.31□□□□□ -0.92
NUDCD3-209ENST00000487118 SEMA4DQ92854 862 aa9.31□□□□□ -0.92
NUDCD3-209ENST00000487118 FNBP1Q96RU3 617 aa9.31□□□□□ -0.92
NUDCD3-209ENST00000487118 POP1Q99575 1024 aaKnown RBP9.31□□□□□ -0.92
NUDCD3-209ENST00000487118 EIF3CQ99613 913 aaKnown RBP9.31□□□□□ -0.92
NUDCD3-209ENST00000487118 TCHPQ9BT92 498 aa9.31□□□□□ -0.92
NUDCD3-209ENST00000487118 STK33Q9BYT3 514 aa9.31□□□□□ -0.92
NUDCD3-209ENST00000487118 GCOM2Q9BZD3 368 aaPredicted RBP9.31□□□□□ -0.92
NUDCD3-209ENST00000487118 FAM49AQ9H0Q0 323 aaPredicted RBP9.31□□□□□ -0.92
NUDCD3-209ENST00000487118 PDZD7Q9H5P4 517 aa9.31□□□□□ -0.92
NUDCD3-209ENST00000487118 NHEJ1Q9H9Q4 299 aaPredicted RBP9.31□□□□□ -0.92
NUDCD3-209ENST00000487118 PDE11AQ9HCR9 933 aa9.31□□□□□ -0.92
NUDCD3-209ENST00000487118 TOPORSQ9NS56 1045 aaPredicted RBP9.31□□□□□ -0.92
NUDCD3-209ENST00000487118 TRMT1Q9NXH9 659 aaKnown RBP9.31□□□□□ -0.92
NUDCD3-209ENST00000487118 REXO2Q9Y3B8 237 aaKnown RBP9.31□□□□□ -0.92
NUDCD3-209ENST00000487118 PTPRJQ12913 1337 aa9.31□□□□□ -0.92
NUDCD3-209ENST00000487118 RANBP2P49792 3224 aaKnown RBP9.3□□□□□ -0.92
NUDCD3-209ENST00000487118 A0A1B0GUA9 196 aa9.3□□□□□ -0.92
NUDCD3-209ENST00000487118 F8VZ95 297 aa9.3□□□□□ -0.92
NUDCD3-209ENST00000487118 ZC3H11AO75152 810 aaKnown RBP eCLIP9.3□□□□□ -0.921e-13■■■■■ 30.4
NUDCD3-209ENST00000487118 CABYRO75952 493 aa9.3□□□□□ -0.92
NUDCD3-209ENST00000487118 INHAP05111 366 aa9.3□□□□□ -0.92
NUDCD3-209ENST00000487118 RPLP2P05387 115 aaKnown RBP9.3□□□□□ -0.92
NUDCD3-209ENST00000487118 ASGR1P07306 291 aa9.3□□□□□ -0.92
NUDCD3-209ENST00000487118 DLATP10515 647 aaKnown RBP9.3□□□□□ -0.92
NUDCD3-209ENST00000487118 HARSP12081 509 aaKnown RBP9.3□□□□□ -0.92
NUDCD3-209ENST00000487118 FERP16591 822 aa9.3□□□□□ -0.92
NUDCD3-209ENST00000487118 TNFSF9P41273 254 aa9.3□□□□□ -0.92
NUDCD3-209ENST00000487118 CHMP4BP1P59074 171 aa9.3□□□□□ -0.92
NUDCD3-209ENST00000487118 RAPGEF1Q13905 1077 aa9.3□□□□□ -0.92
NUDCD3-209ENST00000487118 KCNA10Q16322 511 aa9.3□□□□□ -0.92
NUDCD3-209ENST00000487118 KYAT1Q16773 422 aa9.3□□□□□ -0.92
NUDCD3-209ENST00000487118 KIZQ2M2Z5 673 aa9.3□□□□□ -0.92
NUDCD3-209ENST00000487118 GJB7Q6PEY0 223 aa9.3□□□□□ -0.92
NUDCD3-209ENST00000487118 ZNF662Q6ZS27 426 aa9.3□□□□□ -0.92
NUDCD3-209ENST00000487118 IRF2BP2Q7Z5L9 587 aa9.3□□□□□ -0.92
NUDCD3-209ENST00000487118 RPAINQ86UA6 219 aa9.3□□□□□ -0.92
NUDCD3-209ENST00000487118 WDR49Q8IV35 697 aa9.3□□□□□ -0.92
NUDCD3-209ENST00000487118 FMNL3Q8IVF7 1028 aa9.3□□□□□ -0.92
NUDCD3-209ENST00000487118 PCSK9Q8NBP7 692 aaKnown RBP9.3□□□□□ -0.92
NUDCD3-209ENST00000487118 FBXL13Q8NEE6 735 aa9.3□□□□□ -0.92
NUDCD3-209ENST00000487118 TAS1R2Q8TE23 839 aa9.3□□□□□ -0.92
NUDCD3-209ENST00000487118 PPP1R13LQ8WUF5 828 aa9.3□□□□□ -0.92
NUDCD3-209ENST00000487118 SCLT1Q96NL6 688 aa9.3□□□□□ -0.92
NUDCD3-209ENST00000487118 SPAG5Q96R06 1193 aa9.3□□□□□ -0.92
NUDCD3-209ENST00000487118 PPP1R16BQ96T49 567 aa9.3□□□□□ -0.92
NUDCD3-209ENST00000487118 DESI2Q9BSY9 194 aa9.3□□□□□ -0.92
NUDCD3-209ENST00000487118 GPR88Q9GZN0 384 aa9.3□□□□□ -0.92
NUDCD3-209ENST00000487118 CDHR5Q9HBB8 845 aa9.3□□□□□ -0.92
NUDCD3-209ENST00000487118 RAB20Q9NX57 234 aa9.3□□□□□ -0.92
NUDCD3-209ENST00000487118 DNAJC12Q9UKB3 198 aa9.3□□□□□ -0.92
NUDCD3-209ENST00000487118 KAT6AQ92794 2004 aa9.3□□□□□ -0.92
NUDCD3-209ENST00000487118 GRIN2DO15399 1336 aa9.3□□□□□ -0.92
NUDCD3-209ENST00000487118 RBAK-RBAKDNI3L0D1 243 aa9.29□□□□□ -0.92
NUDCD3-209ENST00000487118 KIF2AO00139 706 aaPredicted RBP9.29□□□□□ -0.92
NUDCD3-209ENST00000487118 TNFRSF10AO00220 468 aa9.29□□□□□ -0.92
NUDCD3-209ENST00000487118 B4GALT4O60513 344 aa9.29□□□□□ -0.92
NUDCD3-209ENST00000487118 CSDE1O75534 798 aaKnown RBP9.29□□□□□ -0.92
NUDCD3-209ENST00000487118 OFD1O75665 1012 aa9.29□□□□□ -0.92
NUDCD3-209ENST00000487118 ERLIN2O94905 339 aa9.29□□□□□ -0.92
NUDCD3-209ENST00000487118 IL18RAPO95256 599 aa9.29□□□□□ -0.92
NUDCD3-209ENST00000487118 TUBB4AP04350 444 aa9.29□□□□□ -0.92
NUDCD3-209ENST00000487118 PLEKP08567 350 aaPredicted RBP9.29□□□□□ -0.92
NUDCD3-209ENST00000487118 CLTAP09496 248 aa9.29□□□□□ -0.92
NUDCD3-209ENST00000487118 TNNI1P19237 187 aa9.29□□□□□ -0.92
NUDCD3-209ENST00000487118 EIF4BP23588 611 aaKnown RBP9.29□□□□□ -0.92
NUDCD3-209ENST00000487118 ANXA13P27216 316 aa9.29□□□□□ -0.92
NUDCD3-209ENST00000487118 AXLP30530 894 aa9.29□□□□□ -0.92
NUDCD3-209ENST00000487118 GRK4P32298 578 aa9.29□□□□□ -0.92
NUDCD3-209ENST00000487118 SOX5P35711 763 aa9.29□□□□□ -0.92
NUDCD3-209ENST00000487118 EIF4A3P38919 411 aaKnown RBP9.29□□□□□ -0.92
NUDCD3-209ENST00000487118 STAT1P42224 750 aa9.29□□□□□ -0.92
NUDCD3-209ENST00000487118 KIF11P52732 1056 aa9.29□□□□□ -0.92
NUDCD3-209ENST00000487118 CRYBB1P53674 252 aaPredicted RBP9.29□□□□□ -0.92
NUDCD3-209ENST00000487118 KRT83P78385 493 aa9.29□□□□□ -0.92
NUDCD3-209ENST00000487118 PTPN11Q06124 597 aaPredicted RBP9.29□□□□□ -0.92
NUDCD3-209ENST00000487118 TMEM62Q0P6H9 643 aa9.29□□□□□ -0.92
NUDCD3-209ENST00000487118 DRAP1Q14919 205 aaPredicted RBP9.29□□□□□ -0.92
NUDCD3-209ENST00000487118 SNX17Q15036 470 aa9.29□□□□□ -0.92
NUDCD3-209ENST00000487118 ENOX2Q16206 610 aaKnown RBP9.29□□□□□ -0.92
NUDCD3-209ENST00000487118 TMEM132AQ24JP5 1023 aa9.29□□□□□ -0.92
NUDCD3-209ENST00000487118 DCAF4L1Q3SXM0 396 aa9.29□□□□□ -0.92
NUDCD3-209ENST00000487118 SEZ6Q53EL9 994 aa9.29□□□□□ -0.92
NUDCD3-209ENST00000487118 TDRD10Q5VZ19 366 aaKnown RBP9.29□□□□□ -0.92
NUDCD3-209ENST00000487118 LHX8Q68G74 356 aa9.29□□□□□ -0.92
NUDCD3-209ENST00000487118 SMYD5Q6GMV2 418 aa9.29□□□□□ -0.92
NUDCD3-209ENST00000487118 GDF6Q6KF10 455 aaPredicted RBP9.29□□□□□ -0.92
NUDCD3-209ENST00000487118 RNF180Q86T96 592 aa9.29□□□□□ -0.92
NUDCD3-209ENST00000487118 SERINC5Q86VE9 423 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms