RNA–Protein interactions for RNA: ENST00000486901.1

HSPG2-211, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 3,586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-211ENST00000486901 SAE1Q9UBE0 346 aaPredicted RBP13.21□□□□□ -0.29
HSPG2-211ENST00000486901 NCANO14594 1321 aa13.21□□□□□ -0.29
HSPG2-211ENST00000486901 NPEPPSP55786 919 aa13.21□□□□□ -0.29
HSPG2-211ENST00000486901 WDR4P57081 412 aaKnown RBP13.21□□□□□ -0.29
HSPG2-211ENST00000486901 DYNLT1P63172 113 aa13.21□□□□□ -0.29
HSPG2-211ENST00000486901 ARHGAP27Q6ZUM4 889 aa13.21□□□□□ -0.29
HSPG2-211ENST00000486901 APBB1IPQ7Z5R6 666 aaPredicted RBP13.21□□□□□ -0.29
HSPG2-211ENST00000486901 FMNL3Q8IVF7 1028 aa13.21□□□□□ -0.29
HSPG2-211ENST00000486901 RHOT2Q8IXI1 618 aa13.21□□□□□ -0.29
HSPG2-211ENST00000486901 A0A1W2PPM1 405 aa13.21□□□□□ -0.3
HSPG2-211ENST00000486901 MXI1P50539 228 aa13.21□□□□□ -0.3
HSPG2-211ENST00000486901 PKN2Q16513 984 aaKnown RBP13.21□□□□□ -0.3
HSPG2-211ENST00000486901 RFWD3Q6PCD5 774 aa13.21□□□□□ -0.3
HSPG2-211ENST00000486901 ZNF365Q70YC5 407 aa13.21□□□□□ -0.3
HSPG2-211ENST00000486901 ZC3H3Q8IXZ2 948 aaKnown RBP13.21□□□□□ -0.3
HSPG2-211ENST00000486901 ZNF577Q9BSK1 485 aa13.21□□□□□ -0.3
HSPG2-211ENST00000486901 SLC5A4Q9NY91 659 aa13.21□□□□□ -0.3
HSPG2-211ENST00000486901 DLEC1Q9Y238 1755 aa13.2□□□□□ -0.3
HSPG2-211ENST00000486901 SRRM3A6NNA2 597 aaPredicted RBP13.2□□□□□ -0.3
HSPG2-211ENST00000486901 NEFHP12036 1026 aa13.2□□□□□ -0.3
HSPG2-211ENST00000486901 CA4P22748 312 aa13.2□□□□□ -0.3
HSPG2-211ENST00000486901 GAD2Q05329 585 aa13.2□□□□□ -0.3
HSPG2-211ENST00000486901 PLA2G4FQ68DD2 849 aa13.2□□□□□ -0.3
HSPG2-211ENST00000486901 SPOPLQ6IQ16 392 aa13.2□□□□□ -0.3
HSPG2-211ENST00000486901 ANKS1BQ7Z6G8 1248 aa13.2□□□□□ -0.3
HSPG2-211ENST00000486901 SIAH1Q8IUQ4 282 aa13.2□□□□□ -0.3
HSPG2-211ENST00000486901 CPXCR1Q8N123 301 aa13.2□□□□□ -0.3
HSPG2-211ENST00000486901 UNC45AQ9H3U1 944 aa13.2□□□□□ -0.3
HSPG2-211ENST00000486901 EXOC1LA0A1B0GW35 172 aa13.2□□□□□ -0.3
HSPG2-211ENST00000486901 DPPA5A6NC42 116 aa13.2□□□□□ -0.3
HSPG2-211ENST00000486901 hCG_1984214I3L0E3 225 aa13.2□□□□□ -0.3
HSPG2-211ENST00000486901 TTC4O95801 387 aa13.2□□□□□ -0.3
HSPG2-211ENST00000486901 ADRB2P07550 413 aa13.2□□□□□ -0.3
HSPG2-211ENST00000486901 TCF4P15884 667 aa13.2□□□□□ -0.3
HSPG2-211ENST00000486901 CTNNA2P26232 953 aa13.2□□□□□ -0.3
HSPG2-211ENST00000486901 SMARCA1P28370 1054 aa13.2□□□□□ -0.3
HSPG2-211ENST00000486901 SIX1Q15475 284 aaPredicted RBP13.2□□□□□ -0.3
HSPG2-211ENST00000486901 ARMC3Q5W041 872 aa13.2□□□□□ -0.3
HSPG2-211ENST00000486901 OTOP1Q7RTM1 612 aa13.2□□□□□ -0.3
HSPG2-211ENST00000486901 ZNF713Q8N859 430 aaPredicted RBP13.2□□□□□ -0.3
HSPG2-211ENST00000486901 ACER1Q8TDN7 264 aa13.2□□□□□ -0.3
HSPG2-211ENST00000486901 TAS1R2Q8TE23 839 aa13.2□□□□□ -0.3
HSPG2-211ENST00000486901 C11orf70Q9BRQ4 267 aa13.2□□□□□ -0.3
HSPG2-211ENST00000486901 SYT11Q9BT88 431 aa13.2□□□□□ -0.3
HSPG2-211ENST00000486901 FHDC1Q9C0D6 1143 aaPredicted RBP13.2□□□□□ -0.3
HSPG2-211ENST00000486901 UBN1Q9NPG3 1134 aa13.2□□□□□ -0.3
HSPG2-211ENST00000486901 A0A0G2JND7 137 aa13.2□□□□□ -0.3
HSPG2-211ENST00000486901 CFAP73A6NFT4 308 aa13.2□□□□□ -0.3
HSPG2-211ENST00000486901 SLC16A3O15427 465 aaKnown RBP13.2□□□□□ -0.3
HSPG2-211ENST00000486901 TAC1P20366 129 aa13.2□□□□□ -0.3
HSPG2-211ENST00000486901 NRLP54845 237 aa13.2□□□□□ -0.3
HSPG2-211ENST00000486901 RASA3Q14644 834 aa13.2□□□□□ -0.3
HSPG2-211ENST00000486901 EFTUD2Q15029 972 aaKnown RBP eCLIP13.2□□□□□ -0.3
HSPG2-211ENST00000486901 P3H1Q32P28 736 aa13.2□□□□□ -0.3
HSPG2-211ENST00000486901 IZUMO3Q5VZ72 239 aa13.2□□□□□ -0.3
HSPG2-211ENST00000486901 LMO3Q8TAP4 145 aa13.2□□□□□ -0.3
HSPG2-211ENST00000486901 CKAP2Q8WWK9 683 aa13.2□□□□□ -0.3
HSPG2-211ENST00000486901 IFT74Q96LB3 600 aa13.2□□□□□ -0.3
HSPG2-211ENST00000486901 FIZ1Q96SL8 496 aa13.2□□□□□ -0.3
HSPG2-211ENST00000486901 GRID1Q9ULK0 1009 aa13.2□□□□□ -0.3
HSPG2-211ENST00000486901 DDX60LQ5H9U9 1706 aaKnown RBP13.19□□□□□ -0.3
HSPG2-211ENST00000486901 RPA3P35244 121 aaPredicted RBP13.19□□□□□ -0.3
HSPG2-211ENST00000486901 FMO1Q01740 532 aa13.19□□□□□ -0.3
HSPG2-211ENST00000486901 PADI6Q6TGC4 694 aa13.19□□□□□ -0.3
HSPG2-211ENST00000486901 DAW1Q8N136 415 aa13.19□□□□□ -0.3
HSPG2-211ENST00000486901 PRR11Q96HE9 360 aaPredicted RBP13.19□□□□□ -0.3
HSPG2-211ENST00000486901 NAF1Q96HR8 494 aaKnown RBP13.19□□□□□ -0.3
HSPG2-211ENST00000486901 HSD17B14Q9BPX1 270 aa13.19□□□□□ -0.3
HSPG2-211ENST00000486901 PCYOX1Q9UHG3 505 aa13.19□□□□□ -0.3
HSPG2-211ENST00000486901 PHTF1Q9UMS5 762 aa13.19□□□□□ -0.3
HSPG2-211ENST00000486901 CHKBQ9Y259 395 aa13.19□□□□□ -0.3
HSPG2-211ENST00000486901 DOT1LQ8TEK3 1739 aa13.19□□□□□ -0.3
HSPG2-211ENST00000486901 IGKV6D-41A0A0C4DH26 115 aa13.19□□□□□ -0.3
HSPG2-211ENST00000486901 SERPINB2P05120 415 aa13.19□□□□□ -0.3
HSPG2-211ENST00000486901 SYDE2Q5VT97 1194 aa13.19□□□□□ -0.3
HSPG2-211ENST00000486901 FBF1Q8TES7 1133 aa13.19□□□□□ -0.3
HSPG2-211ENST00000486901 UCMAQ8WVF2 138 aa13.19□□□□□ -0.3
HSPG2-211ENST00000486901 RBM15Q96T37 977 aaKnown RBP eCLIP13.19□□□□□ -0.3
HSPG2-211ENST00000486901 DDX50Q9BQ39 737 aaKnown RBP13.19□□□□□ -0.3
HSPG2-211ENST00000486901 STMN4Q9H169 189 aaPredicted RBP13.19□□□□□ -0.3
HSPG2-211ENST00000486901 TDRD3Q9H7E2 651 aaKnown RBP13.19□□□□□ -0.3
HSPG2-211ENST00000486901 RXFP1Q9HBX9 757 aa13.19□□□□□ -0.3
HSPG2-211ENST00000486901 SCN7AQ01118 1682 aa13.19□□□□□ -0.3
HSPG2-211ENST00000486901 CFAP69A5D8W1 941 aa13.19□□□□□ -0.3
HSPG2-211ENST00000486901 GSTA1P08263 222 aa13.19□□□□□ -0.3
HSPG2-211ENST00000486901 HARSP12081 509 aaKnown RBP13.19□□□□□ -0.3
HSPG2-211ENST00000486901 CCND1P24385 295 aa13.19□□□□□ -0.3
HSPG2-211ENST00000486901 CTCFP49711 727 aaPredicted RBP13.19□□□□□ -0.3
HSPG2-211ENST00000486901 DGKZQ13574 1117 aa13.19□□□□□ -0.3
HSPG2-211ENST00000486901 FAM102BQ5T8I3 360 aa13.19□□□□□ -0.3
HSPG2-211ENST00000486901 SLF2Q8IX21 1173 aa13.19□□□□□ -0.3
HSPG2-211ENST00000486901 P3H4Q92791 437 aa13.19□□□□□ -0.3
HSPG2-211ENST00000486901 LRRC37BQ96QE4 947 aa13.19□□□□□ -0.3
HSPG2-211ENST00000486901 HSPBP1Q9NZL4 362 aa13.19□□□□□ -0.3
HSPG2-211ENST00000486901 PIK3CAP42336 1068 aa13.18□□□□□ -0.3
HSPG2-211ENST00000486901 CETN1Q12798 172 aa13.18□□□□□ -0.3
HSPG2-211ENST00000486901 MTMR2Q13614 643 aa13.18□□□□□ -0.3
HSPG2-211ENST00000486901 SETDB1Q15047 1291 aa13.18□□□□□ -0.3
HSPG2-211ENST00000486901 ZNF394Q53GI3 561 aa13.18□□□□□ -0.3
HSPG2-211ENST00000486901 TAF1BQ53T94 588 aaPredicted RBP13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms