RNA–Protein interactions for RNA: ENST00000486665.5

HDAC6-229, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-229ENST00000486665 PFKMP08237 780 aa13.92□□□□□ -0.18
HDAC6-229ENST00000486665 RPL13P26373 211 aaKnown RBP13.92□□□□□ -0.18
HDAC6-229ENST00000486665 OSTNP61366 133 aa13.92□□□□□ -0.18
HDAC6-229ENST00000486665 FAM189BP81408 668 aa13.92□□□□□ -0.18
HDAC6-229ENST00000486665 MYL5Q02045 173 aa13.92□□□□□ -0.18
HDAC6-229ENST00000486665 DCAF4L1Q3SXM0 396 aa13.92□□□□□ -0.18
HDAC6-229ENST00000486665 HSP90AA4PQ58FG1 418 aa13.92□□□□□ -0.18
HDAC6-229ENST00000486665 CEP135Q66GS9 1140 aa13.92□□□□□ -0.18
HDAC6-229ENST00000486665 CNKSR3Q6P9H4 555 aa13.92□□□□□ -0.18
HDAC6-229ENST00000486665 FILIP1Q7Z7B0 1213 aa13.92□□□□□ -0.18
HDAC6-229ENST00000486665 MRPL10Q7Z7H8 261 aaKnown RBP13.92□□□□□ -0.18
HDAC6-229ENST00000486665 CBWD2Q8IUF1 395 aa13.92□□□□□ -0.18
HDAC6-229ENST00000486665 HERC6Q8IVU3 1022 aa13.92□□□□□ -0.18
HDAC6-229ENST00000486665 RNF214Q8ND24 703 aa13.92□□□□□ -0.18
HDAC6-229ENST00000486665 FAM200AQ8TCP9 573 aa13.92□□□□□ -0.18
HDAC6-229ENST00000486665 NOC3LQ8WTT2 800 aaKnown RBP13.92□□□□□ -0.18
HDAC6-229ENST00000486665 ARNTL2Q8WYA1 636 aa13.92□□□□□ -0.18
HDAC6-229ENST00000486665 APBB2Q92870 758 aa13.92□□□□□ -0.18
HDAC6-229ENST00000486665 FBXL18Q96ME1 805 aa13.92□□□□□ -0.18
HDAC6-229ENST00000486665 CEP63Q96MT8 703 aa13.92□□□□□ -0.18
HDAC6-229ENST00000486665 ADPGKQ9BRR6 497 aa13.92□□□□□ -0.18
HDAC6-229ENST00000486665 FTHL17Q9BXU8 183 aa13.92□□□□□ -0.18
HDAC6-229ENST00000486665 TSPYL2Q9H2G4 693 aaPredicted RBP13.92□□□□□ -0.18
HDAC6-229ENST00000486665 FAM105AQ9NUU6 356 aa13.92□□□□□ -0.18
HDAC6-229ENST00000486665 SNTG2Q9NY99 539 aa13.92□□□□□ -0.18
HDAC6-229ENST00000486665 IPPQ9Y573 584 aa13.92□□□□□ -0.18
HDAC6-229ENST00000486665 PCDHB2Q9Y5E7 798 aa13.92□□□□□ -0.18
HDAC6-229ENST00000486665 BRWD1Q9NSI6 2320 aa13.92□□□□□ -0.18
HDAC6-229ENST00000486665 A0A0U1RQF3 1178 aa13.91□□□□□ -0.18
HDAC6-229ENST00000486665 SMTNL1A8MU46 457 aa13.91□□□□□ -0.18
HDAC6-229ENST00000486665 C9IYK1 514 aa13.91□□□□□ -0.18
HDAC6-229ENST00000486665 IKBKBO14920 756 aa13.91□□□□□ -0.18
HDAC6-229ENST00000486665 LPXNO60711 386 aa13.91□□□□□ -0.18
HDAC6-229ENST00000486665 ADRB2P07550 413 aa13.91□□□□□ -0.18
HDAC6-229ENST00000486665 STAG3L1P0CL83 205 aa13.91□□□□□ -0.18
HDAC6-229ENST00000486665 POU3F3P20264 500 aaPredicted RBP13.91□□□□□ -0.18
HDAC6-229ENST00000486665 IBSPP21815 317 aaPredicted RBP13.91□□□□□ -0.18
HDAC6-229ENST00000486665 GRM5P41594 1212 aa13.91□□□□□ -0.18
HDAC6-229ENST00000486665 TPD52L1Q16890 204 aaPredicted RBP13.91□□□□□ -0.18
HDAC6-229ENST00000486665 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.91□□□□□ -0.18
HDAC6-229ENST00000486665 GPD1LQ8N335 351 aa13.91□□□□□ -0.18
HDAC6-229ENST00000486665 SLC9A7Q96T83 725 aa13.91□□□□□ -0.18
HDAC6-229ENST00000486665 TRAIPQ9BWF2 469 aa13.91□□□□□ -0.18
HDAC6-229ENST00000486665 APOL6Q9BWW8 343 aa13.91□□□□□ -0.18
HDAC6-229ENST00000486665 TRIM6Q9C030 488 aaPredicted RBP13.91□□□□□ -0.18
HDAC6-229ENST00000486665 CXCL16Q9H2A7 254 aa13.91□□□□□ -0.18
HDAC6-229ENST00000486665 NXF3Q9H4D5 531 aaKnown RBP13.91□□□□□ -0.18
HDAC6-229ENST00000486665 CPSF3Q9UKF6 684 aaKnown RBP13.91□□□□□ -0.18
HDAC6-229ENST00000486665 MEIS3P2A8K0S8 358 aa13.9□□□□□ -0.18
HDAC6-229ENST00000486665 BECN2A8MW95 431 aa13.9□□□□□ -0.18
HDAC6-229ENST00000486665 KIAA0391O15091 583 aaKnown RBP13.9□□□□□ -0.18
HDAC6-229ENST00000486665 ZNF623O75123 536 aa13.9□□□□□ -0.18
HDAC6-229ENST00000486665 LDHAP00338 332 aaKnown RBP13.9□□□□□ -0.18
HDAC6-229ENST00000486665 ATF7P17544 494 aaPredicted RBP13.9□□□□□ -0.18
HDAC6-229ENST00000486665 AKAP5P24588 427 aa13.9□□□□□ -0.18
HDAC6-229ENST00000486665 WNT7BP56706 349 aa13.9□□□□□ -0.18
HDAC6-229ENST00000486665 DEFB103AP81534 67 aa13.9□□□□□ -0.18
HDAC6-229ENST00000486665 IKBKEQ14164 716 aa13.9□□□□□ -0.18
HDAC6-229ENST00000486665 SKIV2LQ15477 1246 aaKnown RBP13.9□□□□□ -0.18
HDAC6-229ENST00000486665 ENOX2Q16206 610 aaKnown RBP13.9□□□□□ -0.18
HDAC6-229ENST00000486665 CDKAL1Q5VV42 579 aa13.9□□□□□ -0.18
HDAC6-229ENST00000486665 SLC24A5Q71RS6 500 aa13.9□□□□□ -0.18
HDAC6-229ENST00000486665 APBB1IPQ7Z5R6 666 aaPredicted RBP13.9□□□□□ -0.18
HDAC6-229ENST00000486665 ZNF598Q86UK7 904 aaKnown RBP13.9□□□□□ -0.18
HDAC6-229ENST00000486665 ECHDC2Q86YB7 292 aa13.9□□□□□ -0.18
HDAC6-229ENST00000486665 FAM186BQ8IYM0 893 aa13.9□□□□□ -0.18
HDAC6-229ENST00000486665 PLEKHO2Q8TD55 490 aa13.9□□□□□ -0.18
HDAC6-229ENST00000486665 LPPQ93052 612 aa13.9□□□□□ -0.18
HDAC6-229ENST00000486665 BORCS6Q96GS4 357 aa13.9□□□□□ -0.18
HDAC6-229ENST00000486665 MFSD14AQ96MC6 490 aa13.9□□□□□ -0.18
HDAC6-229ENST00000486665 THAP9Q9H5L6 903 aa13.9□□□□□ -0.18
HDAC6-229ENST00000486665 ZNF233A6NK53 670 aa13.89□□□□□ -0.19
HDAC6-229ENST00000486665 FGFR1OPO95684 399 aaKnown RBP13.89□□□□□ -0.19
HDAC6-229ENST00000486665 CLTAP09496 248 aa13.89□□□□□ -0.19
HDAC6-229ENST00000486665 ACTN1P12814 892 aa13.89□□□□□ -0.19
HDAC6-229ENST00000486665 ZNF18P17022 549 aa13.89□□□□□ -0.19
HDAC6-229ENST00000486665 PSMC2P35998 433 aaKnown RBP13.89□□□□□ -0.19
HDAC6-229ENST00000486665 WDR5P61964 334 aaKnown RBP13.89□□□□□ -0.19
HDAC6-229ENST00000486665 CYP24A1Q07973 514 aa13.89□□□□□ -0.19
HDAC6-229ENST00000486665 SNRNP35Q16560 246 aaKnown RBP13.89□□□□□ -0.19
HDAC6-229ENST00000486665 SLC10A6Q3KNW5 377 aa13.89□□□□□ -0.19
HDAC6-229ENST00000486665 AGMOQ6ZNB7 445 aa13.89□□□□□ -0.19
HDAC6-229ENST00000486665 FAM43BQ6ZT52 329 aaPredicted RBP13.89□□□□□ -0.19
HDAC6-229ENST00000486665 RNF169Q8NCN4 708 aa13.89□□□□□ -0.19
HDAC6-229ENST00000486665 PHOSPHO2Q8TCD6 241 aa13.89□□□□□ -0.19
HDAC6-229ENST00000486665 ACAP3Q96P50 834 aa13.89□□□□□ -0.19
HDAC6-229ENST00000486665 KIAA1586Q9HCI6 787 aa13.89□□□□□ -0.19
HDAC6-229ENST00000486665 C1orf112Q9NSG2 853 aa13.89□□□□□ -0.19
HDAC6-229ENST00000486665 RNF19AQ9NV58 838 aa13.89□□□□□ -0.19
HDAC6-229ENST00000486665 KLK14Q9P0G3 267 aa13.89□□□□□ -0.19
HDAC6-229ENST00000486665 PARP2Q9UGN5 583 aa13.89□□□□□ -0.19
HDAC6-229ENST00000486665 FRMD4BQ9Y2L6 1034 aa13.89□□□□□ -0.19
HDAC6-229ENST00000486665 ABHD14A-ACY1A0A1B0GW23 586 aa13.88□□□□□ -0.19
HDAC6-229ENST00000486665 LACTBL1A8MY62 500 aa13.88□□□□□ -0.19
HDAC6-229ENST00000486665 TULP1O00294 542 aaPredicted RBP13.88□□□□□ -0.19
HDAC6-229ENST00000486665 SLC16A3O15427 465 aaKnown RBP13.88□□□□□ -0.19
HDAC6-229ENST00000486665 RECQL4O94761 1208 aa13.88□□□□□ -0.19
HDAC6-229ENST00000486665 CXCL8P10145 99 aa13.88□□□□□ -0.19
HDAC6-229ENST00000486665 EPB41P11171 864 aaKnown RBP13.88□□□□□ -0.19
HDAC6-229ENST00000486665 SKIP12755 728 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms