RNA–Protein interactions for RNA: ENST00000486572.1

COL1A1-207, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 3

Gene COL1A1, Length 836 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-207ENST00000486572 USP25Q9UHP3 1055 aa19.88■□□□□ 0.77
COL1A1-207ENST00000486572 SERTAD1Q9UHV2 236 aa19.88■□□□□ 0.77
COL1A1-207ENST00000486572 CIZ1Q9ULV3 898 aaPredicted RBP19.88■□□□□ 0.77
COL1A1-207ENST00000486572 EXOC7Q9UPT5 735 aa19.88■□□□□ 0.77
COL1A1-207ENST00000486572 PCDHB13Q9Y5F0 798 aa19.88■□□□□ 0.77
COL1A1-207ENST00000486572 UNC80Q8N2C7 3258 aa19.88■□□□□ 0.77
COL1A1-207ENST00000486572 A0A0B4J269 797 aa19.87■□□□□ 0.77
COL1A1-207ENST00000486572 FAM237AA0A1B0GTK4 181 aa19.87■□□□□ 0.77
COL1A1-207ENST00000486572 SMIM28A0A1B0GU29 152 aa19.87■□□□□ 0.77
COL1A1-207ENST00000486572 FSD2A1L4K1 749 aa19.87■□□□□ 0.77
COL1A1-207ENST00000486572 CASTOR2A6NHX0 329 aa19.87■□□□□ 0.77
COL1A1-207ENST00000486572 HIDE1A8MVS5 230 aa19.87■□□□□ 0.77
COL1A1-207ENST00000486572 F8W810 466 aa19.87■□□□□ 0.77
COL1A1-207ENST00000486572 CLTAP09496 248 aa19.87■□□□□ 0.77
COL1A1-207ENST00000486572 MYBP10242 640 aa19.87■□□□□ 0.77
COL1A1-207ENST00000486572 CTSAP10619 480 aa19.87■□□□□ 0.77
COL1A1-207ENST00000486572 KCNA5P22460 613 aa19.87■□□□□ 0.77
COL1A1-207ENST00000486572 AFMP43652 599 aa19.87■□□□□ 0.77
COL1A1-207ENST00000486572 HSP90AA2PQ14568 343 aaPredicted RBP19.87■□□□□ 0.77
COL1A1-207ENST00000486572 DUSP6Q16828 381 aa19.87■□□□□ 0.77
COL1A1-207ENST00000486572 CTC1Q2NKJ3 1217 aa19.87■□□□□ 0.77
COL1A1-207ENST00000486572 EP400NLQ6ZTU2 488 aa19.87■□□□□ 0.77
COL1A1-207ENST00000486572 STXBP4Q6ZWJ1 553 aa19.87■□□□□ 0.77
COL1A1-207ENST00000486572 EFHBQ8N7U6 833 aa19.87■□□□□ 0.77
COL1A1-207ENST00000486572 MRPL43Q8N983 215 aaKnown RBP19.87■□□□□ 0.77
COL1A1-207ENST00000486572 FSIP1Q8NA03 581 aa19.87■□□□□ 0.77
COL1A1-207ENST00000486572 ASB2Q96Q27 587 aa19.87■□□□□ 0.77
COL1A1-207ENST00000486572 ACCSQ96QU6 501 aa19.87■□□□□ 0.77
COL1A1-207ENST00000486572 MSTO1Q9BUK6 570 aa19.87■□□□□ 0.77
COL1A1-207ENST00000486572 FGFBP2Q9BYJ0 223 aa19.87■□□□□ 0.77
COL1A1-207ENST00000486572 BLZF1Q9H2G9 400 aa19.87■□□□□ 0.77
COL1A1-207ENST00000486572 SLC38A7Q9NVC3 462 aa19.87■□□□□ 0.77
COL1A1-207ENST00000486572 CNTN3Q9P232 1028 aa19.87■□□□□ 0.77
COL1A1-207ENST00000486572 CACNG4Q9UBN1 327 aa19.87■□□□□ 0.77
COL1A1-207ENST00000486572 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP19.86■□□□□ 0.77
COL1A1-207ENST00000486572 C2orf71A6NGG8 1288 aa19.86■□□□□ 0.77
COL1A1-207ENST00000486572 ANKRD63C9JTQ0 380 aa19.86■□□□□ 0.77
COL1A1-207ENST00000486572 OGTO15294 1046 aa19.86■□□□□ 0.77
COL1A1-207ENST00000486572 FAM189A1O60320 539 aa19.86■□□□□ 0.77
COL1A1-207ENST00000486572 SOD2P04179 222 aa19.86■□□□□ 0.77
COL1A1-207ENST00000486572 KCNE1P15382 129 aa19.86■□□□□ 0.77
COL1A1-207ENST00000486572 CA8P35219 290 aa19.86■□□□□ 0.77
COL1A1-207ENST00000486572 SYKP43405 635 aa19.86■□□□□ 0.77
COL1A1-207ENST00000486572 NDUFA8P51970 172 aa19.86■□□□□ 0.77
COL1A1-207ENST00000486572 KCNA1Q09470 495 aa19.86■□□□□ 0.77
COL1A1-207ENST00000486572 SLC10A6Q3KNW5 377 aa19.86■□□□□ 0.77
COL1A1-207ENST00000486572 SLFN12LQ6IEE8 588 aa19.86■□□□□ 0.77
COL1A1-207ENST00000486572 UNC13DQ70J99 1090 aa19.86■□□□□ 0.77
COL1A1-207ENST00000486572 RABGGTAQ92696 567 aa19.86■□□□□ 0.77
COL1A1-207ENST00000486572 PAAF1Q9BRP4 392 aa19.86■□□□□ 0.77
COL1A1-207ENST00000486572 ADAM28Q9UKQ2 775 aa19.86■□□□□ 0.77
COL1A1-207ENST00000486572 IRAK3Q9Y616 596 aa19.86■□□□□ 0.77
COL1A1-207ENST00000486572 STYXL1Q9Y6J8 313 aa19.86■□□□□ 0.77
COL1A1-207ENST00000486572 BRWD1Q9NSI6 2320 aa19.86■□□□□ 0.77
COL1A1-207ENST00000486572 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP19.85■□□□□ 0.77
COL1A1-207ENST00000486572 TISP43B9A030 160 aa19.85■□□□□ 0.77
COL1A1-207ENST00000486572 PER2O15055 1255 aa19.85■□□□□ 0.77
COL1A1-207ENST00000486572 LINC01565O15544 149 aa19.85■□□□□ 0.77
COL1A1-207ENST00000486572 MEFVO15553 781 aaPredicted RBP19.85■□□□□ 0.77
COL1A1-207ENST00000486572 CXCL14O95715 111 aa19.85■□□□□ 0.77
COL1A1-207ENST00000486572 EFEMP2O95967 443 aa19.85■□□□□ 0.77
COL1A1-207ENST00000486572 CXCL8P10145 99 aa19.85■□□□□ 0.77
COL1A1-207ENST00000486572 CASP1P29466 404 aa19.85■□□□□ 0.77
COL1A1-207ENST00000486572 TNFSF9P41273 254 aa19.85■□□□□ 0.77
COL1A1-207ENST00000486572 ADAM15Q13444 863 aa19.85■□□□□ 0.77
COL1A1-207ENST00000486572 CUL4BQ13620 913 aa19.85■□□□□ 0.77
COL1A1-207ENST00000486572 TPRNQ4KMQ1 711 aa19.85■□□□□ 0.77
COL1A1-207ENST00000486572 TJAP1Q5JTD0 557 aa19.85■□□□□ 0.77
COL1A1-207ENST00000486572 FAM26FQ5R3K3 315 aa19.85■□□□□ 0.77
COL1A1-207ENST00000486572 GRAMD1CQ8IYS0 662 aa19.85■□□□□ 0.77
COL1A1-207ENST00000486572 RNF168Q8IYW5 571 aaPredicted RBP19.85■□□□□ 0.77
COL1A1-207ENST00000486572 AUTS2Q8WXX7 1259 aa19.85■□□□□ 0.77
COL1A1-207ENST00000486572 HPS3Q969F9 1004 aa19.85■□□□□ 0.77
COL1A1-207ENST00000486572 PAGE5Q96GU1 130 aa19.85■□□□□ 0.77
COL1A1-207ENST00000486572 UROC1Q96N76 676 aa19.85■□□□□ 0.77
COL1A1-207ENST00000486572 ZMAT2Q96NC0 199 aaKnown RBP19.85■□□□□ 0.77
COL1A1-207ENST00000486572 HERC2P3Q9BVR0 1158 aa19.85■□□□□ 0.77
COL1A1-207ENST00000486572 IKZF4Q9H2S9 585 aa19.85■□□□□ 0.77
COL1A1-207ENST00000486572 PLEKHA5Q9HAU0 1116 aa19.85■□□□□ 0.77
COL1A1-207ENST00000486572 CITO14578 2027 aa19.85■□□□□ 0.77
COL1A1-207ENST00000486572 PVALEFA0A1B0GWK0 134 aa19.84■□□□□ 0.77
COL1A1-207ENST00000486572 TBX10O75333 385 aa19.84■□□□□ 0.77
COL1A1-207ENST00000486572 TADA2AO75478 443 aa19.84■□□□□ 0.77
COL1A1-207ENST00000486572 KIF4AO95239 1232 aa19.84■□□□□ 0.77
COL1A1-207ENST00000486572 URODP06132 367 aa19.84■□□□□ 0.77
COL1A1-207ENST00000486572 LTBRP36941 435 aa19.84■□□□□ 0.77
COL1A1-207ENST00000486572 KCNQ1P51787 676 aa19.84■□□□□ 0.77
COL1A1-207ENST00000486572 PPP2R3AQ06190 1150 aa19.84■□□□□ 0.77
COL1A1-207ENST00000486572 EHHADHQ08426 723 aa19.84■□□□□ 0.77
COL1A1-207ENST00000486572 PTPN14Q15678 1187 aa19.84■□□□□ 0.77
COL1A1-207ENST00000486572 LEXMQ3ZCV2 418 aa19.84■□□□□ 0.77
COL1A1-207ENST00000486572 ZBTB41Q5SVQ8 909 aa19.84■□□□□ 0.77
COL1A1-207ENST00000486572 FUT10Q6P4F1 479 aa19.84■□□□□ 0.77
COL1A1-207ENST00000486572 SYCP3Q8IZU3 236 aa19.84■□□□□ 0.77
COL1A1-207ENST00000486572 GOLPH3LQ9H4A5 285 aa19.84■□□□□ 0.77
COL1A1-207ENST00000486572 TMEM206Q9H813 350 aa19.84■□□□□ 0.77
COL1A1-207ENST00000486572 SF3B1O75533 1304 aaKnown RBP eCLIP19.83■□□□□ 0.77
COL1A1-207ENST00000486572 TTC26A0AVF1 554 aa19.83■□□□□ 0.77
COL1A1-207ENST00000486572 GOLGA6L4A6NEF3 574 aa19.83■□□□□ 0.77
COL1A1-207ENST00000486572 H3BQ06 376 aaPredicted RBP19.83■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms