RNA–Protein interactions for RNA: ENST00000486311.5

SREBF1-214, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 3

Gene SREBF1, Length 473 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-214ENST00000486311 RILPL1Q5EBL4 403 aa24.65■■□□□ 1.54
SREBF1-214ENST00000486311 PPP1R10Q96QC0 940 aaKnown RBP24.65■■□□□ 1.54
SREBF1-214ENST00000486311 PHOX2BQ99453 314 aa24.65■■□□□ 1.54
SREBF1-214ENST00000486311 CLSTN3Q9BQT9 956 aa24.65■■□□□ 1.54
SREBF1-214ENST00000486311 RUSC1Q9BVN2 902 aa24.65■■□□□ 1.54
SREBF1-214ENST00000486311 PRKD2Q9BZL6 878 aa24.65■■□□□ 1.54
SREBF1-214ENST00000486311 TMEM134Q9H6X4 195 aa24.65■■□□□ 1.54
SREBF1-214ENST00000486311 EPS15L1Q9UBC2 864 aa24.65■■□□□ 1.54
SREBF1-214ENST00000486311 DUSP12Q9UNI6 340 aa24.65■■□□□ 1.54
SREBF1-214ENST00000486311 TDRD15B5MCY1 1934 aaKnown RBP24.65■■□□□ 1.54
SREBF1-214ENST00000486311 HIP1RO75146 1068 aa24.64■■□□□ 1.54
SREBF1-214ENST00000486311 ZMYND10O75800 440 aa24.64■■□□□ 1.54
SREBF1-214ENST00000486311 GBP2P32456 591 aaPredicted RBP24.64■■□□□ 1.54
SREBF1-214ENST00000486311 DMP1Q13316 513 aaPredicted RBP24.64■■□□□ 1.54
SREBF1-214ENST00000486311 PSMD5Q16401 504 aa24.64■■□□□ 1.54
SREBF1-214ENST00000486311 RINT1Q6NUQ1 792 aa24.64■■□□□ 1.54
SREBF1-214ENST00000486311 PDXDC1Q6P996 788 aa24.64■■□□□ 1.54
SREBF1-214ENST00000486311 C1orf186Q6ZWK4 172 aa24.64■■□□□ 1.54
SREBF1-214ENST00000486311 KCNK18Q7Z418 384 aa24.64■■□□□ 1.54
SREBF1-214ENST00000486311 DRC1Q96MC2 740 aa24.64■■□□□ 1.54
SREBF1-214ENST00000486311 ACO2Q99798 780 aaKnown RBP24.64■■□□□ 1.54
SREBF1-214ENST00000486311 IRF2BPLQ9H1B7 796 aa24.64■■□□□ 1.54
SREBF1-214ENST00000486311 PIDD1Q9HB75 910 aa24.64■■□□□ 1.54
SREBF1-214ENST00000486311 PTPRHQ9HD43 1115 aa24.64■■□□□ 1.54
SREBF1-214ENST00000486311 ARHGAP28Q9P2N2 729 aa24.64■■□□□ 1.54
SREBF1-214ENST00000486311 FBXW11Q9UKB1 542 aa24.64■■□□□ 1.54
SREBF1-214ENST00000486311 TMEM189-UBE2V1I3L0A0 370 aa24.63■■□□□ 1.53
SREBF1-214ENST00000486311 ATP2C1P98194 919 aaPredicted RBP24.63■■□□□ 1.53
SREBF1-214ENST00000486311 MAPK7Q13164 816 aa24.63■■□□□ 1.53
SREBF1-214ENST00000486311 GLRA4Q5JXX5 417 aa24.63■■□□□ 1.53
SREBF1-214ENST00000486311 MCTP1Q6DN14 999 aa24.63■■□□□ 1.53
SREBF1-214ENST00000486311 ASTLQ6HA08 431 aaPredicted RBP24.63■■□□□ 1.53
SREBF1-214ENST00000486311 CEP57Q86XR8 500 aa24.63■■□□□ 1.53
SREBF1-214ENST00000486311 TMEM105Q8N8V8 129 aa24.63■■□□□ 1.53
SREBF1-214ENST00000486311 TMX3Q96JJ7 454 aa24.63■■□□□ 1.53
SREBF1-214ENST00000486311 MYADMQ96S97 322 aa24.63■■□□□ 1.53
SREBF1-214ENST00000486311 MRPL4Q9BYD3 311 aaKnown RBP24.63■■□□□ 1.53
SREBF1-214ENST00000486311 CDT1Q9H211 546 aa24.63■■□□□ 1.53
SREBF1-214ENST00000486311 C17orf75Q9HAS0 396 aa24.63■■□□□ 1.53
SREBF1-214ENST00000486311 GALR2O43603 387 aaPredicted RBP24.62■■□□□ 1.53
SREBF1-214ENST00000486311 GRM5P41594 1212 aa24.62■■□□□ 1.53
SREBF1-214ENST00000486311 DCLRE1AQ6PJP8 1040 aa24.62■■□□□ 1.53
SREBF1-214ENST00000486311 PDZRN4Q6ZMN7 1036 aaPredicted RBP24.62■■□□□ 1.53
SREBF1-214ENST00000486311 TAS1R3Q7RTX0 852 aa24.62■■□□□ 1.53
SREBF1-214ENST00000486311 UROC1Q96N76 676 aa24.62■■□□□ 1.53
SREBF1-214ENST00000486311 TIPINQ9BVW5 301 aa24.62■■□□□ 1.53
SREBF1-214ENST00000486311 MFSD1Q9H3U5 465 aa24.62■■□□□ 1.53
SREBF1-214ENST00000486311 KMT5AQ9NQR1 393 aa24.62■■□□□ 1.53
SREBF1-214ENST00000486311 RBM19Q9Y4C8 960 aaKnown RBP24.62■■□□□ 1.53
SREBF1-214ENST00000486311 B3GAT3O94766 335 aa24.61■■□□□ 1.53
SREBF1-214ENST00000486311 FGFR3P22607 806 aa24.61■■□□□ 1.53
SREBF1-214ENST00000486311 GUCY2CP25092 1073 aa24.61■■□□□ 1.53
SREBF1-214ENST00000486311 CLCN5P51795 746 aa24.61■■□□□ 1.53
SREBF1-214ENST00000486311 XKR4Q5GH76 650 aa24.61■■□□□ 1.53
SREBF1-214ENST00000486311 HYIQ5T013 277 aa24.61■■□□□ 1.53
SREBF1-214ENST00000486311 KCTD17Q8N5Z5 321 aa24.61■■□□□ 1.53
SREBF1-214ENST00000486311 CEP120Q8N960 986 aa24.61■■□□□ 1.53
SREBF1-214ENST00000486311 CCDC94Q9BW85 323 aaPredicted RBP24.61■■□□□ 1.53
SREBF1-214ENST00000486311 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP24.61■■□□□ 1.53
SREBF1-214ENST00000486311 PLXNA3P51805 1871 aa24.61■■□□□ 1.53
SREBF1-214ENST00000486311 SMIM28A0A1B0GU29 152 aa24.6■■□□□ 1.53
SREBF1-214ENST00000486311 ADAM12O43184 909 aa24.6■■□□□ 1.53
SREBF1-214ENST00000486311 IGFBP6P24592 240 aaPredicted RBP24.6■■□□□ 1.53
SREBF1-214ENST00000486311 CLCNKBP51801 687 aa24.6■■□□□ 1.53
SREBF1-214ENST00000486311 YARSP54577 528 aaKnown RBP24.6■■□□□ 1.53
SREBF1-214ENST00000486311 UPP1Q16831 310 aa24.6■■□□□ 1.53
SREBF1-214ENST00000486311 ZNF568Q3ZCX4 644 aa24.6■■□□□ 1.53
SREBF1-214ENST00000486311 LIN9Q5TKA1 542 aa24.6■■□□□ 1.53
SREBF1-214ENST00000486311 CD300LGQ6UXG3 332 aa24.6■■□□□ 1.53
SREBF1-214ENST00000486311 ALKAL1Q6UXT8 129 aa24.6■■□□□ 1.53
SREBF1-214ENST00000486311 NXPE3Q969Y0 559 aa24.6■■□□□ 1.53
SREBF1-214ENST00000486311 PNMA5Q96PV4 448 aa24.6■■□□□ 1.53
SREBF1-214ENST00000486311 NTPCRQ9BSD7 190 aaKnown RBP24.6■■□□□ 1.53
SREBF1-214ENST00000486311 TARS2Q9BW92 718 aaKnown RBP24.6■■□□□ 1.53
SREBF1-214ENST00000486311 TOPORSQ9NS56 1045 aaPredicted RBP24.6■■□□□ 1.53
SREBF1-214ENST00000486311 CD2BP2O95400 341 aaKnown RBP24.59■■□□□ 1.53
SREBF1-214ENST00000486311 HNRNPA1P09651 372 aaKnown RBP eCLIP24.59■■□□□ 1.53
SREBF1-214ENST00000486311 MCF2P10911 925 aa24.59■■□□□ 1.53
SREBF1-214ENST00000486311 PROZP22891 400 aa24.59■■□□□ 1.53
SREBF1-214ENST00000486311 GJB2P29033 226 aa24.59■■□□□ 1.53
SREBF1-214ENST00000486311 ZRSR1Q15695 479 aaKnown RBP24.59■■□□□ 1.53
SREBF1-214ENST00000486311 CWF19L1Q69YN2 538 aaKnown RBP24.59■■□□□ 1.53
SREBF1-214ENST00000486311 RSAD2Q8WXG1 361 aa24.59■■□□□ 1.53
SREBF1-214ENST00000486311 C2orf16Q68DN1 1984 aa24.59■■□□□ 1.53
SREBF1-214ENST00000486311 H3BQV1 296 aa24.58■■□□□ 1.53
SREBF1-214ENST00000486311 ABLIM1O14639 778 aa24.58■■□□□ 1.53
SREBF1-214ENST00000486311 NARSO43776 548 aaKnown RBP24.58■■□□□ 1.53
SREBF1-214ENST00000486311 C8AP07357 584 aa24.58■■□□□ 1.53
SREBF1-214ENST00000486311 LAMP2P13473 410 aa24.58■■□□□ 1.53
SREBF1-214ENST00000486311 HOXA9P31269 272 aa24.58■■□□□ 1.53
SREBF1-214ENST00000486311 RAB33AQ14088 237 aa24.58■■□□□ 1.53
SREBF1-214ENST00000486311 GET4Q7L5D6 327 aaPredicted RBP24.58■■□□□ 1.53
SREBF1-214ENST00000486311 SYT2Q8N9I0 419 aaPredicted RBP24.58■■□□□ 1.53
SREBF1-214ENST00000486311 SPIRE2Q8WWL2 714 aa24.58■■□□□ 1.53
SREBF1-214ENST00000486311 ATOH1Q92858 354 aaPredicted RBP24.58■■□□□ 1.53
SREBF1-214ENST00000486311 GOLGA2P5Q9HBQ8 144 aa24.58■■□□□ 1.53
SREBF1-214ENST00000486311 FAM86C1Q9NVL1 165 aa24.58■■□□□ 1.53
SREBF1-214ENST00000486311 MTRRQ9UBK8 725 aa24.58■■□□□ 1.53
SREBF1-214ENST00000486311 KCNG1Q9UIX4 513 aa24.58■■□□□ 1.53
SREBF1-214ENST00000486311 FBXL21Q9UKT6 434 aa24.58■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms