RNA–Protein interactions for RNA: ENST00000486211.1

XRN1-212, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 1,180 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-212ENST00000486211 HCFC1R1Q9NWW0 138 aa9.32□□□□□ -0.92
XRN1-212ENST00000486211 KANSL3Q9P2N6 904 aa9.32□□□□□ -0.92
XRN1-212ENST00000486211 KLK13Q9UKR3 277 aa9.32□□□□□ -0.92
XRN1-212ENST00000486211 KCNH3Q9ULD8 1083 aa9.32□□□□□ -0.92
XRN1-212ENST00000486211 CEP131Q9UPN4 1083 aa9.32□□□□□ -0.92
XRN1-212ENST00000486211 PIN4Q9Y237 131 aaKnown RBP9.32□□□□□ -0.92
XRN1-212ENST00000486211 MSRB2Q9Y3D2 182 aa9.32□□□□□ -0.92
XRN1-212ENST00000486211 PCDHB2Q9Y5E7 798 aa9.32□□□□□ -0.92
XRN1-212ENST00000486211 PCDHGA5Q9Y5G8 931 aa9.32□□□□□ -0.92
XRN1-212ENST00000486211 SPAG17Q6Q759 2223 aa9.32□□□□□ -0.92
XRN1-212ENST00000486211 LAMA1P25391 3075 aa9.32□□□□□ -0.92
XRN1-212ENST00000486211 SPDYE3A6NKU9 549 aa9.31□□□□□ -0.92
XRN1-212ENST00000486211 HYAL3O43820 417 aaPredicted RBP9.31□□□□□ -0.92
XRN1-212ENST00000486211 POMCP01189 267 aa9.31□□□□□ -0.92
XRN1-212ENST00000486211 CSRP1P21291 193 aaKnown RBP9.31□□□□□ -0.92
XRN1-212ENST00000486211 TMOD1P28289 359 aa9.31□□□□□ -0.92
XRN1-212ENST00000486211 KIF5BP33176 963 aa9.31□□□□□ -0.92
XRN1-212ENST00000486211 KIAA1211LQ6NV74 962 aa9.31□□□□□ -0.92
XRN1-212ENST00000486211 MIS18BP1Q6P0N0 1132 aa9.31□□□□□ -0.92
XRN1-212ENST00000486211 Q6ZS52 159 aa9.31□□□□□ -0.92
XRN1-212ENST00000486211 TRMT1LQ7Z2T5 733 aaKnown RBP9.31□□□□□ -0.92
XRN1-212ENST00000486211 MAP4K3Q8IVH8 894 aa9.31□□□□□ -0.92
XRN1-212ENST00000486211 CKAP2LQ8IYA6 745 aa9.31□□□□□ -0.92
XRN1-212ENST00000486211 GAB3Q8WWW8 586 aa9.31□□□□□ -0.92
XRN1-212ENST00000486211 ELSPBP1Q96BH3 223 aa9.31□□□□□ -0.92
XRN1-212ENST00000486211 PGBD4Q96DM1 585 aa9.31□□□□□ -0.92
XRN1-212ENST00000486211 RRP36Q96EU6 259 aaKnown RBP9.31□□□□□ -0.92
XRN1-212ENST00000486211 MRGPRX2Q96LB1 330 aa9.31□□□□□ -0.92
XRN1-212ENST00000486211 SCLT1Q96NL6 688 aa9.31□□□□□ -0.92
XRN1-212ENST00000486211 FAM193BQ96PV7 902 aaPredicted RBP9.31□□□□□ -0.92
XRN1-212ENST00000486211 EDEM2Q9BV94 578 aa9.31□□□□□ -0.92
XRN1-212ENST00000486211 GPR62Q9BZJ7 368 aa9.31□□□□□ -0.92
XRN1-212ENST00000486211 CNNM2Q9H8M5 875 aa9.31□□□□□ -0.92
XRN1-212ENST00000486211 TRPV5Q9NQA5 729 aa9.31□□□□□ -0.92
XRN1-212ENST00000486211 VPS45Q9NRW7 570 aa9.31□□□□□ -0.92
XRN1-212ENST00000486211 DNMT3BQ9UBC3 853 aaKnown RBP9.31□□□□□ -0.92
XRN1-212ENST00000486211 TICRRQ7Z2Z1 1910 aa9.31□□□□□ -0.92
XRN1-212ENST00000486211 MYH9P35579 1960 aaKnown RBP9.3□□□□□ -0.92
XRN1-212ENST00000486211 WFS1O76024 890 aa9.3□□□□□ -0.92
XRN1-212ENST00000486211 DXOO77932 396 aaKnown RBP9.3□□□□□ -0.92
XRN1-212ENST00000486211 C8AP07357 584 aa9.3□□□□□ -0.92
XRN1-212ENST00000486211 SFPQP23246 707 aaKnown RBP eCLIP9.3□□□□□ -0.92
XRN1-212ENST00000486211 OR1G1P47890 313 aa9.3□□□□□ -0.92
XRN1-212ENST00000486211 GRM2Q14416 872 aa9.3□□□□□ -0.92
XRN1-212ENST00000486211 SLC5A9Q2M3M2 681 aa9.3□□□□□ -0.92
XRN1-212ENST00000486211 PPM1LQ5SGD2 360 aa9.3□□□□□ -0.92
XRN1-212ENST00000486211 PRSS55Q6UWB4 352 aaPredicted RBP9.3□□□□□ -0.92
XRN1-212ENST00000486211 CACNA2D4Q7Z3S7 1137 aa9.3□□□□□ -0.92
XRN1-212ENST00000486211 MCRS1Q96EZ8 462 aa9.3□□□□□ -0.92
XRN1-212ENST00000486211 GCOM2Q9BZD3 368 aaPredicted RBP9.3□□□□□ -0.92
XRN1-212ENST00000486211 BRD9Q9H8M2 597 aa9.3□□□□□ -0.92
XRN1-212ENST00000486211 ZNF334Q9HCZ1 680 aaPredicted RBP9.3□□□□□ -0.92
XRN1-212ENST00000486211 RBM12Q9NTZ6 932 aaKnown RBP9.3□□□□□ -0.92
XRN1-212ENST00000486211 GDE1Q9NZC3 331 aa9.3□□□□□ -0.92
XRN1-212ENST00000486211 PIAS3Q9Y6X2 628 aa9.3□□□□□ -0.92
XRN1-212ENST00000486211 CNTNAP2Q9UHC6 1331 aa9.3□□□□□ -0.92
XRN1-212ENST00000486211 A0A087WZ62 844 aa9.29□□□□□ -0.92
XRN1-212ENST00000486211 ARNTLO00327 626 aa9.29□□□□□ -0.92
XRN1-212ENST00000486211 ZNF862O60290 1169 aa9.29□□□□□ -0.92
XRN1-212ENST00000486211 XYLBO75191 536 aa9.29□□□□□ -0.92
XRN1-212ENST00000486211 RPP40O75818 363 aaKnown RBP9.29□□□□□ -0.92
XRN1-212ENST00000486211 CCNE1P24864 410 aa9.29□□□□□ -0.92
XRN1-212ENST00000486211 SMARCA1P28370 1054 aa9.29□□□□□ -0.92
XRN1-212ENST00000486211 MFAP1P55081 439 aaKnown RBP9.29□□□□□ -0.92
XRN1-212ENST00000486211 CREMQ03060 361 aa9.29□□□□□ -0.92
XRN1-212ENST00000486211 IMMTQ16891 758 aaKnown RBP9.29□□□□□ -0.92
XRN1-212ENST00000486211 USP41Q3LFD5 358 aa9.29□□□□□ -0.92
XRN1-212ENST00000486211 PABPC1LQ4VXU2 614 aaKnown RBP9.29□□□□□ -0.92
XRN1-212ENST00000486211 UBXN11Q5T124 520 aa9.29□□□□□ -0.92
XRN1-212ENST00000486211 LIN9Q5TKA1 542 aa9.29□□□□□ -0.92
XRN1-212ENST00000486211 DAB2IPQ5VWQ8 1189 aa9.29□□□□□ -0.92
XRN1-212ENST00000486211 FUT10Q6P4F1 479 aa9.29□□□□□ -0.92
XRN1-212ENST00000486211 LURAP1LQ8IV03 231 aa9.29□□□□□ -0.92
XRN1-212ENST00000486211 GLIS3Q8NEA6 775 aa9.29□□□□□ -0.92
XRN1-212ENST00000486211 PGBD1Q96JS3 809 aa9.29□□□□□ -0.92
XRN1-212ENST00000486211 ZC3H10Q96K80 434 aaKnown RBP9.29□□□□□ -0.92
XRN1-212ENST00000486211 CLSTN3Q9BQT9 956 aa9.29□□□□□ -0.92
XRN1-212ENST00000486211 FDXACB1Q9BRP7 624 aaPredicted RBP9.29□□□□□ -0.92
XRN1-212ENST00000486211 REPIN1Q9BWE0 567 aaKnown RBP9.29□□□□□ -0.92
XRN1-212ENST00000486211 AGPAT5Q9NUQ2 364 aa9.29□□□□□ -0.92
XRN1-212ENST00000486211 GABBR1Q9UBS5 961 aa9.29□□□□□ -0.92
XRN1-212ENST00000486211 POLIQ9UNA4 740 aa9.29□□□□□ -0.92
XRN1-212ENST00000486211 UNC79Q9P2D8 2635 aa9.29□□□□□ -0.92
XRN1-212ENST00000486211 LNP1A1A4G5 178 aa9.28□□□□□ -0.92
XRN1-212ENST00000486211 FAM221BA6H8Z2 402 aa9.28□□□□□ -0.92
XRN1-212ENST00000486211 FAM86B1E9PN63 330 aa9.28□□□□□ -0.92
XRN1-212ENST00000486211 J3QL48 77 aa9.28□□□□□ -0.92
XRN1-212ENST00000486211 ADAM12O43184 909 aa9.28□□□□□ -0.92
XRN1-212ENST00000486211 FAM86B2P0C5J1 330 aa9.28□□□□□ -0.92
XRN1-212ENST00000486211 CEBPBP17676 345 aa9.28□□□□□ -0.92
XRN1-212ENST00000486211 PDE1AP54750 535 aa9.28□□□□□ -0.92
XRN1-212ENST00000486211 TARBP2Q15633 366 aaKnown RBP9.28□□□□□ -0.92
XRN1-212ENST00000486211 RTP2Q5QGT7 225 aa9.28□□□□□ -0.92
XRN1-212ENST00000486211 C20orf194Q5TEA3 1177 aa9.28□□□□□ -0.92
XRN1-212ENST00000486211 ZNF746Q6NUN9 644 aaPredicted RBP9.28□□□□□ -0.92
XRN1-212ENST00000486211 NIPA1Q7RTP0 329 aa9.28□□□□□ -0.92
XRN1-212ENST00000486211 SRBD1Q8N5C6 995 aaKnown RBP9.28□□□□□ -0.92
XRN1-212ENST00000486211 SMG8Q8ND04 991 aaKnown RBP9.28□□□□□ -0.92
XRN1-212ENST00000486211 SLC7A14Q8TBB6 771 aa9.28□□□□□ -0.92
XRN1-212ENST00000486211 IRF7Q92985 503 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms