RNA–Protein interactions for RNA: ENST00000486028.1

HMG20B-211, Transcript of high mobility group 20B, humanhuman

TSL 2

Gene HMG20B, Length 719 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-211ENST00000486028 TCF25Q9BQ70 676 aa13.6□□□□□ -0.23
HMG20B-211ENST00000486028 STRA6Q9BX79 667 aa13.6□□□□□ -0.23
HMG20B-211ENST00000486028 PRDM6Q9NQX0 595 aa13.6□□□□□ -0.23
HMG20B-211ENST00000486028 ENTPD7Q9NQZ7 604 aa13.6□□□□□ -0.23
HMG20B-211ENST00000486028 THEGQ9P2T0 379 aa13.6□□□□□ -0.23
HMG20B-211ENST00000486028 PRG3Q9Y2Y8 225 aaPredicted RBP13.6□□□□□ -0.23
HMG20B-211ENST00000486028 KIAA1671Q9BY89 1806 aa13.6□□□□□ -0.23
HMG20B-211ENST00000486028 PVALEFA0A1B0GWK0 134 aa13.59□□□□□ -0.23
HMG20B-211ENST00000486028 PTGESO14684 152 aa13.59□□□□□ -0.23
HMG20B-211ENST00000486028 OGTO15294 1046 aa13.59□□□□□ -0.23
HMG20B-211ENST00000486028 ACTN4O43707 911 aaKnown RBP13.59□□□□□ -0.23
HMG20B-211ENST00000486028 PPP1R37O75864 691 aa13.59□□□□□ -0.23
HMG20B-211ENST00000486028 CXCL14O95715 111 aa13.59□□□□□ -0.23
HMG20B-211ENST00000486028 MYBP10242 640 aa13.59□□□□□ -0.23
HMG20B-211ENST00000486028 HYAL1Q12794 435 aa13.59□□□□□ -0.23
HMG20B-211ENST00000486028 SMC1AQ14683 1233 aaKnown RBP13.59□□□□□ -0.23
HMG20B-211ENST00000486028 POSTNQ15063 836 aa13.59□□□□□ -0.23
HMG20B-211ENST00000486028 AAK1Q2M2I8 961 aa13.59□□□□□ -0.23
HMG20B-211ENST00000486028 XKR4Q5GH76 650 aa13.59□□□□□ -0.23
HMG20B-211ENST00000486028 PLPP4Q5VZY2 271 aa13.59□□□□□ -0.23
HMG20B-211ENST00000486028 ALKAL1Q6UXT8 129 aa13.59□□□□□ -0.23
HMG20B-211ENST00000486028 UNC13DQ70J99 1090 aa13.59□□□□□ -0.23
HMG20B-211ENST00000486028 TMEM173Q86WV6 379 aaPredicted RBP13.59□□□□□ -0.23
HMG20B-211ENST00000486028 SYCP3Q8IZU3 236 aa13.59□□□□□ -0.23
HMG20B-211ENST00000486028 VPS52Q8N1B4 723 aa13.59□□□□□ -0.23
HMG20B-211ENST00000486028 BCL7CQ8WUZ0 217 aaPredicted RBP13.59□□□□□ -0.23
HMG20B-211ENST00000486028 ATXN2LQ8WWM7 1075 aaKnown RBP13.59□□□□□ -0.23
HMG20B-211ENST00000486028 PAGE5Q96GU1 130 aa13.59□□□□□ -0.23
HMG20B-211ENST00000486028 MSTO1Q9BUK6 570 aa13.59□□□□□ -0.23
HMG20B-211ENST00000486028 BLZF1Q9H2G9 400 aa13.59□□□□□ -0.23
HMG20B-211ENST00000486028 TLE6Q9H808 572 aa13.59□□□□□ -0.23
HMG20B-211ENST00000486028 TMEM206Q9H813 350 aa13.59□□□□□ -0.23
HMG20B-211ENST00000486028 PLEKHA5Q9HAU0 1116 aa13.59□□□□□ -0.23
HMG20B-211ENST00000486028 SLC38A7Q9NVC3 462 aa13.59□□□□□ -0.23
HMG20B-211ENST00000486028 CHMP5Q9NZZ3 219 aa13.59□□□□□ -0.23
HMG20B-211ENST00000486028 EYSQ5T1H1 3165 aa13.59□□□□□ -0.23
HMG20B-211ENST00000486028 SMIM28A0A1B0GU29 152 aa13.58□□□□□ -0.24
HMG20B-211ENST00000486028 ANKRD63C9JTQ0 380 aa13.58□□□□□ -0.24
HMG20B-211ENST00000486028 TADA2AO75478 443 aa13.58□□□□□ -0.24
HMG20B-211ENST00000486028 MYL1P05976 194 aa13.58□□□□□ -0.24
HMG20B-211ENST00000486028 KCNE1P15382 129 aa13.58□□□□□ -0.24
HMG20B-211ENST00000486028 CASP5P51878 434 aa13.58□□□□□ -0.24
HMG20B-211ENST00000486028 MRPS5P82675 430 aaKnown RBP13.58□□□□□ -0.24
HMG20B-211ENST00000486028 SEZ6Q53EL9 994 aa13.58□□□□□ -0.24
HMG20B-211ENST00000486028 SLC39A4Q6P5W5 647 aa13.58□□□□□ -0.24
HMG20B-211ENST00000486028 GRAMD1CQ8IYS0 662 aa13.58□□□□□ -0.24
HMG20B-211ENST00000486028 MRPL43Q8N983 215 aaKnown RBP13.58□□□□□ -0.24
HMG20B-211ENST00000486028 TMEM87AQ8NBN3 555 aa13.58□□□□□ -0.24
HMG20B-211ENST00000486028 PABPC5Q96DU9 382 aaKnown RBP13.58□□□□□ -0.24
HMG20B-211ENST00000486028 CCDC34Q96HJ3 373 aa13.58□□□□□ -0.24
HMG20B-211ENST00000486028 SNX27Q96L92 541 aa13.58□□□□□ -0.24
HMG20B-211ENST00000486028 PPP1R10Q96QC0 940 aaKnown RBP13.58□□□□□ -0.24
HMG20B-211ENST00000486028 CDCA3Q99618 268 aaPredicted RBP13.58□□□□□ -0.24
HMG20B-211ENST00000486028 HAPLN2Q9GZV7 340 aa13.58□□□□□ -0.24
HMG20B-211ENST00000486028 CXCL16Q9H2A7 254 aa13.58□□□□□ -0.24
HMG20B-211ENST00000486028 IGFLR1Q9H665 355 aa13.58□□□□□ -0.24
HMG20B-211ENST00000486028 PCDHGC5Q9Y5F6 944 aa13.58□□□□□ -0.24
HMG20B-211ENST00000486028 STYXL1Q9Y6J8 313 aa13.58□□□□□ -0.24
HMG20B-211ENST00000486028 TCHHQ07283 1943 aa13.58□□□□□ -0.24
HMG20B-211ENST00000486028 A0A0C4DFX4 3053 aa13.58□□□□□ -0.24
HMG20B-211ENST00000486028 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.57□□□□□ -0.24
HMG20B-211ENST00000486028 FSD2A1L4K1 749 aa13.57□□□□□ -0.24
HMG20B-211ENST00000486028 CASTOR2A6NHX0 329 aa13.57□□□□□ -0.24
HMG20B-211ENST00000486028 ZNF202O95125 648 aa13.57□□□□□ -0.24
HMG20B-211ENST00000486028 CTSAP10619 480 aa13.57□□□□□ -0.24
HMG20B-211ENST00000486028 CASP1P29466 404 aa13.57□□□□□ -0.24
HMG20B-211ENST00000486028 NRIP1P48552 1158 aa13.57□□□□□ -0.24
HMG20B-211ENST00000486028 KCNA1Q09470 495 aa13.57□□□□□ -0.24
HMG20B-211ENST00000486028 CUL4BQ13620 913 aa13.57□□□□□ -0.24
HMG20B-211ENST00000486028 HSP90AA2PQ14568 343 aaPredicted RBP13.57□□□□□ -0.24
HMG20B-211ENST00000486028 COL19A1Q14993 1142 aa13.57□□□□□ -0.24
HMG20B-211ENST00000486028 SLC10A6Q3KNW5 377 aa13.57□□□□□ -0.24
HMG20B-211ENST00000486028 GLRA4Q5JXX5 417 aa13.57□□□□□ -0.24
HMG20B-211ENST00000486028 FAM26FQ5R3K3 315 aa13.57□□□□□ -0.24
HMG20B-211ENST00000486028 EP400NLQ6ZTU2 488 aa13.57□□□□□ -0.24
HMG20B-211ENST00000486028 ADGRD2Q7Z7M1 963 aa13.57□□□□□ -0.24
HMG20B-211ENST00000486028 RBM23Q86U06 439 aaKnown RBP13.57□□□□□ -0.24
HMG20B-211ENST00000486028 EFHBQ8N7U6 833 aa13.57□□□□□ -0.24
HMG20B-211ENST00000486028 POMGNT1Q8WZA1 660 aa13.57□□□□□ -0.24
HMG20B-211ENST00000486028 HPS3Q969F9 1004 aa13.57□□□□□ -0.24
HMG20B-211ENST00000486028 DDX27Q96GQ7 796 aaKnown RBP13.57□□□□□ -0.24
HMG20B-211ENST00000486028 UROC1Q96N76 676 aa13.57□□□□□ -0.24
HMG20B-211ENST00000486028 TSPAN18Q96SJ8 248 aa13.57□□□□□ -0.24
HMG20B-211ENST00000486028 UBE2ZQ9H832 354 aaPredicted RBP13.57□□□□□ -0.24
HMG20B-211ENST00000486028 RPF1Q9H9Y2 349 aaKnown RBP13.57□□□□□ -0.24
HMG20B-211ENST00000486028 MARCH5Q9NX47 278 aa13.57□□□□□ -0.24
HMG20B-211ENST00000486028 CNTN3Q9P232 1028 aa13.57□□□□□ -0.24
HMG20B-211ENST00000486028 AGO2Q9UKV8 859 aaKnown RBP13.57□□□□□ -0.24
HMG20B-211ENST00000486028 BRWD1Q9NSI6 2320 aa13.57□□□□□ -0.24
HMG20B-211ENST00000486028 REV3LO60673 3130 aa13.56□□□□□ -0.24
HMG20B-211ENST00000486028 C2orf71A6NGG8 1288 aa13.56□□□□□ -0.24
HMG20B-211ENST00000486028 HIDE1A8MVS5 230 aa13.56□□□□□ -0.24
HMG20B-211ENST00000486028 PER2O15055 1255 aa13.56□□□□□ -0.24
HMG20B-211ENST00000486028 EIF3DO15371 548 aaKnown RBP eCLIP13.56□□□□□ -0.24
HMG20B-211ENST00000486028 PRPF6O94906 941 aaKnown RBP13.56□□□□□ -0.24
HMG20B-211ENST00000486028 SOD2P04179 222 aa13.56□□□□□ -0.24
HMG20B-211ENST00000486028 CXCL8P10145 99 aa13.56□□□□□ -0.24
HMG20B-211ENST00000486028 CA8P35219 290 aa13.56□□□□□ -0.24
HMG20B-211ENST00000486028 ADAM15Q13444 863 aa13.56□□□□□ -0.24
HMG20B-211ENST00000486028 NAB2Q15742 525 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms