RNA–Protein interactions for RNA: ENST00000485980.1

PLXNB3-208, Transcript of plexin B3, humanhuman

TSL 3

Gene PLXNB3, Length 773 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLXNB3-208ENST00000485980 PARP2Q9UGN5 583 aa17.13■□□□□ 0.33
PLXNB3-208ENST00000485980 SMC3Q9UQE7 1217 aa17.13■□□□□ 0.33
PLXNB3-208ENST00000485980 KMT2BQ9UMN6 2715 aaPredicted RBP17.12■□□□□ 0.33
PLXNB3-208ENST00000485980 SLC37A4O43826 429 aa17.12■□□□□ 0.33
PLXNB3-208ENST00000485980 MARCH6O60337 910 aa17.12■□□□□ 0.33
PLXNB3-208ENST00000485980 XYLBO75191 536 aa17.12■□□□□ 0.33
PLXNB3-208ENST00000485980 C8AP07357 584 aa17.12■□□□□ 0.33
PLXNB3-208ENST00000485980 HNRNPA1P09651 372 aaKnown RBP eCLIP17.12■□□□□ 0.33
PLXNB3-208ENST00000485980 ANP32AP39687 249 aaKnown RBP17.12■□□□□ 0.33
PLXNB3-208ENST00000485980 MAGEA9P43362 315 aa17.12■□□□□ 0.33
PLXNB3-208ENST00000485980 PTENP60484 403 aa17.12■□□□□ 0.33
PLXNB3-208ENST00000485980 PPP2R5CQ13362 524 aa17.12■□□□□ 0.33
PLXNB3-208ENST00000485980 PCBP1Q15365 356 aaKnown RBP eCLIP17.12■□□□□ 0.33
PLXNB3-208ENST00000485980 INF2Q27J81 1249 aa17.12■□□□□ 0.33
PLXNB3-208ENST00000485980 MOXD1Q6UVY6 613 aa17.12■□□□□ 0.33
PLXNB3-208ENST00000485980 NEK8Q86SG6 692 aa17.12■□□□□ 0.33
PLXNB3-208ENST00000485980 CDR2LQ86X02 465 aaPredicted RBP17.12■□□□□ 0.33
PLXNB3-208ENST00000485980 ITFG1Q8TB96 612 aa17.12■□□□□ 0.33
PLXNB3-208ENST00000485980 LXNQ9BS40 222 aa17.12■□□□□ 0.33
PLXNB3-208ENST00000485980 FBXW11Q9UKB1 542 aa17.12■□□□□ 0.33
PLXNB3-208ENST00000485980 VAV3Q9UKW4 847 aa17.12■□□□□ 0.33
PLXNB3-208ENST00000485980 SF3B1O75533 1304 aaKnown RBP eCLIP17.12■□□□□ 0.33
PLXNB3-208ENST00000485980 ZBTB39O15060 712 aa17.11■□□□□ 0.33
PLXNB3-208ENST00000485980 NCAM2O15394 837 aa17.11■□□□□ 0.33
PLXNB3-208ENST00000485980 NPTXRO95502 500 aa17.11■□□□□ 0.33
PLXNB3-208ENST00000485980 GCFC2P16383 781 aaKnown RBP17.11■□□□□ 0.33
PLXNB3-208ENST00000485980 ARF4P18085 180 aaPredicted RBP17.11■□□□□ 0.33
PLXNB3-208ENST00000485980 GRIK3Q13003 919 aa17.11■□□□□ 0.33
PLXNB3-208ENST00000485980 TFDP1Q14186 410 aa17.11■□□□□ 0.33
PLXNB3-208ENST00000485980 HSP90AA2PQ14568 343 aaPredicted RBP17.11■□□□□ 0.33
PLXNB3-208ENST00000485980 MXD4Q14582 209 aaPredicted RBP17.11■□□□□ 0.33
PLXNB3-208ENST00000485980 NPY5RQ15761 445 aa17.11■□□□□ 0.33
PLXNB3-208ENST00000485980 FAM171A1Q5VUB5 890 aa17.11■□□□□ 0.33
PLXNB3-208ENST00000485980 RSPO2Q6UXX9 243 aaPredicted RBP17.11■□□□□ 0.33
PLXNB3-208ENST00000485980 TPRG1Q6ZUI0 275 aa17.11■□□□□ 0.33
PLXNB3-208ENST00000485980 HSCBQ8IWL3 235 aa17.11■□□□□ 0.33
PLXNB3-208ENST00000485980 C4orf19Q8IY42 314 aa17.11■□□□□ 0.33
PLXNB3-208ENST00000485980 ZBTB44Q8NCP5 570 aa17.11■□□□□ 0.33
PLXNB3-208ENST00000485980 GSTCDQ8NEC7 633 aa17.11■□□□□ 0.33
PLXNB3-208ENST00000485980 OXER1Q8TDS5 423 aa17.11■□□□□ 0.33
PLXNB3-208ENST00000485980 CLSTN3Q9BQT9 956 aa17.11■□□□□ 0.33
PLXNB3-208ENST00000485980 RTKNQ9BST9 563 aa17.11■□□□□ 0.33
PLXNB3-208ENST00000485980 TTPALQ9BTX7 342 aa17.11■□□□□ 0.33
PLXNB3-208ENST00000485980 EPC1Q9H2F5 836 aa17.11■□□□□ 0.33
PLXNB3-208ENST00000485980 RGL1Q9NZL6 768 aa17.11■□□□□ 0.33
PLXNB3-208ENST00000485980 GMEB2Q9UKD1 530 aa17.11■□□□□ 0.33
PLXNB3-208ENST00000485980 PATJQ8NI35 1801 aa17.11■□□□□ 0.33
PLXNB3-208ENST00000485980 H3BQV1 296 aa17.1■□□□□ 0.33
PLXNB3-208ENST00000485980 M0R2N6 131 aa17.1■□□□□ 0.33
PLXNB3-208ENST00000485980 TBC1D4O60343 1298 aa17.1■□□□□ 0.33
PLXNB3-208ENST00000485980 CCNT1O60563 726 aaKnown RBP17.1■□□□□ 0.33
PLXNB3-208ENST00000485980 NR5A1Q13285 461 aa17.1■□□□□ 0.33
PLXNB3-208ENST00000485980 CTTNQ14247 550 aaKnown RBP17.1■□□□□ 0.33
PLXNB3-208ENST00000485980 EPHA7Q15375 998 aa17.1■□□□□ 0.33
PLXNB3-208ENST00000485980 PSMD5Q16401 504 aa17.1■□□□□ 0.33
PLXNB3-208ENST00000485980 NCAPH2Q6IBW4 605 aa17.1■□□□□ 0.33
PLXNB3-208ENST00000485980 SLC7A14Q8TBB6 771 aa17.1■□□□□ 0.33
PLXNB3-208ENST00000485980 ING5Q8WYH8 240 aa17.1■□□□□ 0.33
PLXNB3-208ENST00000485980 DYDC2Q96IM9 177 aa17.1■□□□□ 0.33
PLXNB3-208ENST00000485980 FAM20AQ96MK3 541 aa17.1■□□□□ 0.33
PLXNB3-208ENST00000485980 NELL2Q99435 816 aa17.1■□□□□ 0.33
PLXNB3-208ENST00000485980 PAAF1Q9BRP4 392 aa17.1■□□□□ 0.33
PLXNB3-208ENST00000485980 HCFC1R1Q9NWW0 138 aa17.1■□□□□ 0.33
PLXNB3-208ENST00000485980 CASTOR2A6NHX0 329 aa17.09■□□□□ 0.33
PLXNB3-208ENST00000485980 B4GALT5O43286 388 aa17.09■□□□□ 0.33
PLXNB3-208ENST00000485980 LILRB5O75023 590 aa17.09■□□□□ 0.33
PLXNB3-208ENST00000485980 TARSP26639 723 aaKnown RBP17.09■□□□□ 0.33
PLXNB3-208ENST00000485980 GJB2P29033 226 aa17.09■□□□□ 0.33
PLXNB3-208ENST00000485980 CYP4A11Q02928 519 aa17.09■□□□□ 0.33
PLXNB3-208ENST00000485980 MBTD1Q05BQ5 628 aa17.09■□□□□ 0.33
PLXNB3-208ENST00000485980 ST3GAL2Q16842 350 aa17.09■□□□□ 0.33
PLXNB3-208ENST00000485980 AXDND1Q5T1B0 1012 aaPredicted RBP17.09■□□□□ 0.33
PLXNB3-208ENST00000485980 SLC27A1Q6PCB7 646 aa17.09■□□□□ 0.33
PLXNB3-208ENST00000485980 ZNF852Q6ZMS4 543 aa17.09■□□□□ 0.33
PLXNB3-208ENST00000485980 TPH2Q8IWU9 490 aa17.09■□□□□ 0.33
PLXNB3-208ENST00000485980 LNX1Q8TBB1 728 aaPredicted RBP17.09■□□□□ 0.33
PLXNB3-208ENST00000485980 CHAMP1Q96JM3 812 aa17.09■□□□□ 0.33
PLXNB3-208ENST00000485980 ZSWIM4Q9H7M6 989 aa17.09■□□□□ 0.33
PLXNB3-208ENST00000485980 RAB23Q9ULC3 237 aa17.09■□□□□ 0.33
PLXNB3-208ENST00000485980 BTBD18B2RXH4 712 aa17.08■□□□□ 0.32
PLXNB3-208ENST00000485980 K7ELQ4 463 aaPredicted RBP17.08■□□□□ 0.32
PLXNB3-208ENST00000485980 ADAM12O43184 909 aa17.08■□□□□ 0.32
PLXNB3-208ENST00000485980 HSP90AA1P07900 732 aaKnown RBP17.08■□□□□ 0.32
PLXNB3-208ENST00000485980 TUSC3Q13454 348 aa17.08■□□□□ 0.32
PLXNB3-208ENST00000485980 BECN1Q14457 450 aa17.08■□□□□ 0.32
PLXNB3-208ENST00000485980 LPAL2Q16609 132 aa17.08■□□□□ 0.32
PLXNB3-208ENST00000485980 AMHR2Q16671 573 aa17.08■□□□□ 0.32
PLXNB3-208ENST00000485980 PABPC1LQ4VXU2 614 aaKnown RBP17.08■□□□□ 0.32
PLXNB3-208ENST00000485980 NPAS3Q8IXF0 933 aa17.08■□□□□ 0.32
PLXNB3-208ENST00000485980 FBXO18Q8NFZ0 1043 aa17.08■□□□□ 0.32
PLXNB3-208ENST00000485980 ASAP3Q8TDY4 903 aa17.08■□□□□ 0.32
PLXNB3-208ENST00000485980 PIK3R5Q8WYR1 880 aa17.08■□□□□ 0.32
PLXNB3-208ENST00000485980 CLDN23Q96B33 292 aa17.08■□□□□ 0.32
PLXNB3-208ENST00000485980 MCRS1Q96EZ8 462 aa17.08■□□□□ 0.32
PLXNB3-208ENST00000485980 KCNMB3Q9NPA1 279 aa17.08■□□□□ 0.32
PLXNB3-208ENST00000485980 XPNPEP1Q9NQW7 623 aa17.08■□□□□ 0.32
PLXNB3-208ENST00000485980 HEBP1Q9NRV9 189 aa17.08■□□□□ 0.32
PLXNB3-208ENST00000485980 DNMT3BQ9UBC3 853 aaKnown RBP17.08■□□□□ 0.32
PLXNB3-208ENST00000485980 NOL7Q9UMY1 257 aaKnown RBP17.08■□□□□ 0.32
PLXNB3-208ENST00000485980 MRPS17Q9Y2R5 130 aaKnown RBP17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms