RNA–Protein interactions for RNA: ENST00000485810.1

PRPF38B-205, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 2

Gene PRPF38B, Length 1,352 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-205ENST00000485810 NIM1KQ8IY84 436 aa4.48□□□□□ -1.69
PRPF38B-205ENST00000485810 ZGPATQ8N5A5 531 aaKnown RBP4.48□□□□□ -1.69
PRPF38B-205ENST00000485810 IL17REQ8NFR9 667 aa4.48□□□□□ -1.69
PRPF38B-205ENST00000485810 IPCEF1Q8WWN9 437 aaPredicted RBP4.48□□□□□ -1.69
PRPF38B-205ENST00000485810 KLHL6Q8WZ60 621 aa4.48□□□□□ -1.69
PRPF38B-205ENST00000485810 GJA10Q969M2 543 aa4.48□□□□□ -1.69
PRPF38B-205ENST00000485810 TEKT1Q969V4 418 aa4.48□□□□□ -1.69
PRPF38B-205ENST00000485810 ANAPC16Q96DE5 110 aa4.48□□□□□ -1.69
PRPF38B-205ENST00000485810 ZBTB10Q96DT7 871 aa4.48□□□□□ -1.69
PRPF38B-205ENST00000485810 MTMR8Q96EF0 704 aa4.48□□□□□ -1.69
PRPF38B-205ENST00000485810 PPM1MQ96MI6 270 aa4.48□□□□□ -1.69
PRPF38B-205ENST00000485810 AGAP3Q96P47 875 aa4.48□□□□□ -1.69
PRPF38B-205ENST00000485810 NELL2Q99435 816 aa4.48□□□□□ -1.69
PRPF38B-205ENST00000485810 GPR20Q99678 358 aa4.48□□□□□ -1.69
PRPF38B-205ENST00000485810 EIF2AK1Q9BQI3 630 aaKnown RBP4.48□□□□□ -1.69
PRPF38B-205ENST00000485810 CENPOQ9BU64 300 aa4.48□□□□□ -1.69
PRPF38B-205ENST00000485810 LGR4Q9BXB1 951 aa4.48□□□□□ -1.69
PRPF38B-205ENST00000485810 TRIM8Q9BZR9 551 aa4.48□□□□□ -1.69
PRPF38B-205ENST00000485810 USP44Q9H0E7 712 aa4.48□□□□□ -1.69
PRPF38B-205ENST00000485810 KLHL25Q9H0H3 589 aa4.48□□□□□ -1.69
PRPF38B-205ENST00000485810 RXFP1Q9HBX9 757 aa4.48□□□□□ -1.69
PRPF38B-205ENST00000485810 NLRC4Q9NPP4 1024 aa4.48□□□□□ -1.69
PRPF38B-205ENST00000485810 ARGLU1Q9NWB6 273 aaPredicted RBP4.48□□□□□ -1.69
PRPF38B-205ENST00000485810 ZNHIT6Q9NWK9 470 aaKnown RBP4.48□□□□□ -1.69
PRPF38B-205ENST00000485810 TRMT1Q9NXH9 659 aaKnown RBP4.48□□□□□ -1.69
PRPF38B-205ENST00000485810 GTF3C4Q9UKN8 822 aa4.48□□□□□ -1.69
PRPF38B-205ENST00000485810 MYRFQ9Y2G1 1151 aa4.48□□□□□ -1.69
PRPF38B-205ENST00000485810 CEP83Q9Y592 693 aa4.48□□□□□ -1.69
PRPF38B-205ENST00000485810 MST1RQ04912 1400 aa4.47□□□□□ -1.69
PRPF38B-205ENST00000485810 WDR33Q9C0J8 1336 aaKnown RBP4.47□□□□□ -1.69
PRPF38B-205ENST00000485810 KIF13AQ9H1H9 1805 aa4.47□□□□□ -1.69
PRPF38B-205ENST00000485810 PNMA6EA0A0J9YXQ4 647 aa4.47□□□□□ -1.69
PRPF38B-205ENST00000485810 TSPY2A6NKD2 308 aa4.47□□□□□ -1.69
PRPF38B-205ENST00000485810 VGLL3A8MV65 326 aa4.47□□□□□ -1.69
PRPF38B-205ENST00000485810 STXBP3O00186 592 aa4.47□□□□□ -1.69
PRPF38B-205ENST00000485810 SGSM2O43147 1006 aa4.47□□□□□ -1.69
PRPF38B-205ENST00000485810 PLOD3O60568 738 aa4.47□□□□□ -1.69
PRPF38B-205ENST00000485810 SKAP2O75563 359 aaPredicted RBP4.47□□□□□ -1.69
PRPF38B-205ENST00000485810 MBD4O95243 580 aa4.47□□□□□ -1.69
PRPF38B-205ENST00000485810 IFIT1P09914 478 aaKnown RBP4.47□□□□□ -1.69
PRPF38B-205ENST00000485810 TSPY3P0CV98 308 aa4.47□□□□□ -1.69
PRPF38B-205ENST00000485810 TSPY8P0CW00 308 aa4.47□□□□□ -1.69
PRPF38B-205ENST00000485810 GLULP15104 373 aa4.47□□□□□ -1.69
PRPF38B-205ENST00000485810 ATF2P15336 505 aa4.47□□□□□ -1.69
PRPF38B-205ENST00000485810 HOXC9P31274 260 aa4.47□□□□□ -1.69
PRPF38B-205ENST00000485810 STIP1P31948 543 aaKnown RBP4.47□□□□□ -1.69
PRPF38B-205ENST00000485810 RAD52P43351 418 aa4.47□□□□□ -1.69
PRPF38B-205ENST00000485810 NOP2P46087 812 aaKnown RBP4.47□□□□□ -1.69
PRPF38B-205ENST00000485810 KCNC1P48547 511 aa4.47□□□□□ -1.69
PRPF38B-205ENST00000485810 PAPOLAP51003 745 aaKnown RBP4.47□□□□□ -1.69
PRPF38B-205ENST00000485810 NEK4P51957 841 aa4.47□□□□□ -1.69
PRPF38B-205ENST00000485810 TSPY1Q01534 308 aa4.47□□□□□ -1.69
PRPF38B-205ENST00000485810 SLC7A5Q01650 507 aa4.47□□□□□ -1.69
PRPF38B-205ENST00000485810 COL9A2Q14055 689 aaPredicted RBP4.47□□□□□ -1.69
PRPF38B-205ENST00000485810 PUM1Q14671 1186 aaKnown RBP eCLIP4.47□□□□□ -1.69
PRPF38B-205ENST00000485810 PPP2R5BQ15173 497 aa4.47□□□□□ -1.69
PRPF38B-205ENST00000485810 MTERF2Q49AM1 385 aa4.47□□□□□ -1.69
PRPF38B-205ENST00000485810 TNNI3KQ59H18 835 aa4.47□□□□□ -1.69
PRPF38B-205ENST00000485810 METTL24Q5JXM2 366 aa4.47□□□□□ -1.69
PRPF38B-205ENST00000485810 SLC10A5Q5PT55 438 aa4.47□□□□□ -1.69
PRPF38B-205ENST00000485810 ARMC4Q5T2S8 1044 aa4.47□□□□□ -1.69
PRPF38B-205ENST00000485810 UTP14CQ5TAP6 766 aaKnown RBP4.47□□□□□ -1.69
PRPF38B-205ENST00000485810 MEX3CQ5U5Q3 659 aaKnown RBP4.47□□□□□ -1.69
PRPF38B-205ENST00000485810 HLA-DQA1Q5Y7H0 255 aa4.47□□□□□ -1.69
PRPF38B-205ENST00000485810 KIAA1211LQ6NV74 962 aa4.47□□□□□ -1.69
PRPF38B-205ENST00000485810 CAVIN1Q6NZI2 390 aaKnown RBP4.47□□□□□ -1.69
PRPF38B-205ENST00000485810 FAM180BQ6P0A1 224 aa4.47□□□□□ -1.69
PRPF38B-205ENST00000485810 MTERF4Q7Z6M4 381 aaKnown RBP4.47□□□□□ -1.69
PRPF38B-205ENST00000485810 MYLK4Q86YV6 388 aaPredicted RBP4.47□□□□□ -1.69
PRPF38B-205ENST00000485810 THEMISQ8N1K5 641 aaPredicted RBP4.47□□□□□ -1.69
PRPF38B-205ENST00000485810 UBR7Q8N806 425 aa4.47□□□□□ -1.69
PRPF38B-205ENST00000485810 SPATA5Q8NB90 893 aa4.47□□□□□ -1.69
PRPF38B-205ENST00000485810 OR8H1Q8NGG4 311 aa4.47□□□□□ -1.69
PRPF38B-205ENST00000485810 GABPB2Q8TAK5 448 aaPredicted RBP4.47□□□□□ -1.69
PRPF38B-205ENST00000485810 CCT6BQ92526 530 aa4.47□□□□□ -1.69
PRPF38B-205ENST00000485810 ERCC4Q92889 916 aaPredicted RBP4.47□□□□□ -1.69
PRPF38B-205ENST00000485810 NINJ1Q92982 152 aa4.47□□□□□ -1.69
PRPF38B-205ENST00000485810 TIFAQ96CG3 184 aa4.47□□□□□ -1.69
PRPF38B-205ENST00000485810 KIF1BPQ96EK5 621 aa4.47□□□□□ -1.69
PRPF38B-205ENST00000485810 ZMAT2Q96NC0 199 aaKnown RBP4.47□□□□□ -1.69
PRPF38B-205ENST00000485810 PTCHD1Q96NR3 888 aa4.47□□□□□ -1.69
PRPF38B-205ENST00000485810 GSDMAQ96QA5 445 aa4.47□□□□□ -1.69
PRPF38B-205ENST00000485810 RTFDC1Q9BY42 306 aaPredicted RBP4.47□□□□□ -1.69
PRPF38B-205ENST00000485810 TM6SF1Q9BZW5 370 aa4.47□□□□□ -1.69
PRPF38B-205ENST00000485810 OSBPL5Q9H0X9 879 aaPredicted RBP4.47□□□□□ -1.69
PRPF38B-205ENST00000485810 SMYD2Q9NRG4 433 aa4.47□□□□□ -1.69
PRPF38B-205ENST00000485810 NOL12Q9UGY1 213 aaKnown RBP eCLIP4.47□□□□□ -1.69
PRPF38B-205ENST00000485810 CTNNA3Q9UI47 895 aa4.47□□□□□ -1.69
PRPF38B-205ENST00000485810 DMTF1Q9Y222 760 aa4.47□□□□□ -1.69
PRPF38B-205ENST00000485810 FAM50BQ9Y247 325 aa4.47□□□□□ -1.69
PRPF38B-205ENST00000485810 ZKSCAN5Q9Y2L8 839 aa4.47□□□□□ -1.69
PRPF38B-205ENST00000485810 SF3B6Q9Y3B4 125 aaKnown RBP4.47□□□□□ -1.69
PRPF38B-205ENST00000485810 MSRB2Q9Y3D2 182 aa4.47□□□□□ -1.69
PRPF38B-205ENST00000485810 SLC4A7Q9Y6M7 1214 aa4.47□□□□□ -1.69
PRPF38B-205ENST00000485810 DUSP10Q9Y6W6 482 aa4.47□□□□□ -1.69
PRPF38B-205ENST00000485810 KDM3BQ7LBC6 1761 aa4.46□□□□□ -1.7
PRPF38B-205ENST00000485810 RPAP1Q9BWH6 1393 aaPredicted RBP4.46□□□□□ -1.7
PRPF38B-205ENST00000485810 UTYO14607 1347 aa4.46□□□□□ -1.7
PRPF38B-205ENST00000485810 PRPF3O43395 683 aaKnown RBP4.46□□□□□ -1.7
PRPF38B-205ENST00000485810 PDE8AO60658 829 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms