RNA–Protein interactions for RNA: ENST00000485628.2

APOE-205, Transcript of apolipoprotein E, humanhuman

TSL 1 (best)

Gene APOE, Length 771 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOE-205ENST00000485628 CNOT6LQ96LI5 555 aaKnown RBP17.21■□□□□ 0.35
APOE-205ENST00000485628 TSPAN18Q96SJ8 248 aa17.21■□□□□ 0.35
APOE-205ENST00000485628 GDF15Q99988 308 aa17.21■□□□□ 0.35
APOE-205ENST00000485628 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.21■□□□□ 0.35
APOE-205ENST00000485628 CCDC94Q9BW85 323 aaPredicted RBP17.21■□□□□ 0.35
APOE-205ENST00000485628 TRIM6Q9C030 488 aaPredicted RBP17.21■□□□□ 0.35
APOE-205ENST00000485628 RBAKQ9NYW8 714 aaPredicted RBP17.21■□□□□ 0.35
APOE-205ENST00000485628 BECN2A8MW95 431 aa17.2■□□□□ 0.34
APOE-205ENST00000485628 LACTBL1A8MY62 500 aa17.2■□□□□ 0.34
APOE-205ENST00000485628 PMM2O15305 246 aa17.2■□□□□ 0.34
APOE-205ENST00000485628 OFD1O75665 1012 aa17.2■□□□□ 0.34
APOE-205ENST00000485628 IL18RAPO95256 599 aa17.2■□□□□ 0.34
APOE-205ENST00000485628 FGBP02675 491 aa17.2■□□□□ 0.34
APOE-205ENST00000485628 EPB41P11171 864 aaKnown RBP17.2■□□□□ 0.34
APOE-205ENST00000485628 HARSP12081 509 aaKnown RBP17.2■□□□□ 0.34
APOE-205ENST00000485628 AKAP5P24588 427 aa17.2■□□□□ 0.34
APOE-205ENST00000485628 MATR3P43243 847 aaKnown RBP eCLIP17.2■□□□□ 0.34
APOE-205ENST00000485628 OSTNP61366 133 aa17.2■□□□□ 0.34
APOE-205ENST00000485628 WDR5P61964 334 aaKnown RBP17.2■□□□□ 0.34
APOE-205ENST00000485628 DLG4P78352 724 aa17.2■□□□□ 0.34
APOE-205ENST00000485628 PSRC1Q6PGN9 363 aaPredicted RBP17.2■□□□□ 0.34
APOE-205ENST00000485628 C15orf39Q6ZRI6 1047 aa17.2■□□□□ 0.34
APOE-205ENST00000485628 NPAS4Q8IUM7 802 aa17.2■□□□□ 0.34
APOE-205ENST00000485628 FAM114A1Q8IWE2 563 aa17.2■□□□□ 0.34
APOE-205ENST00000485628 CXorf38Q8TB03 319 aa17.2■□□□□ 0.34
APOE-205ENST00000485628 ZNF516Q92618 1163 aa17.2■□□□□ 0.34
APOE-205ENST00000485628 PGBD4Q96DM1 585 aa17.2■□□□□ 0.34
APOE-205ENST00000485628 ZMAT2Q96NC0 199 aaKnown RBP17.2■□□□□ 0.34
APOE-205ENST00000485628 RPF1Q9H9Y2 349 aaKnown RBP17.2■□□□□ 0.34
APOE-205ENST00000485628 RC3H2Q9HBD1 1191 aaKnown RBP17.2■□□□□ 0.34
APOE-205ENST00000485628 PDE11AQ9HCR9 933 aa17.2■□□□□ 0.34
APOE-205ENST00000485628 UBN1Q9NPG3 1134 aa17.2■□□□□ 0.34
APOE-205ENST00000485628 MIOSQ9NXC5 875 aa17.2■□□□□ 0.34
APOE-205ENST00000485628 ARMCX3Q9UH62 379 aaPredicted RBP17.2■□□□□ 0.34
APOE-205ENST00000485628 DERAQ9Y315 318 aa17.2■□□□□ 0.34
APOE-205ENST00000485628 FNDC1Q4ZHG4 1894 aaPredicted RBP17.2■□□□□ 0.34
APOE-205ENST00000485628 PTPRJQ12913 1337 aa17.2■□□□□ 0.34
APOE-205ENST00000485628 LRRIQ3A6PVS8 624 aaPredicted RBP17.19■□□□□ 0.34
APOE-205ENST00000485628 KCNJ18B7U540 433 aa17.19■□□□□ 0.34
APOE-205ENST00000485628 PTGESO14684 152 aa17.19■□□□□ 0.34
APOE-205ENST00000485628 ITGA4P13612 1032 aa17.19■□□□□ 0.34
APOE-205ENST00000485628 VAMP7P51809 220 aa17.19■□□□□ 0.34
APOE-205ENST00000485628 AFF1P51825 1210 aaKnown RBP17.19■□□□□ 0.34
APOE-205ENST00000485628 KCNJ12Q14500 433 aa17.19■□□□□ 0.34
APOE-205ENST00000485628 KRT31Q15323 416 aa17.19■□□□□ 0.34
APOE-205ENST00000485628 UVSSAQ2YD98 709 aa17.19■□□□□ 0.34
APOE-205ENST00000485628 CLLU1OSQ5K130 101 aa17.19■□□□□ 0.34
APOE-205ENST00000485628 NT5DC4Q86YG4 428 aa17.19■□□□□ 0.34
APOE-205ENST00000485628 EFCAB13Q8IY85 973 aa17.19■□□□□ 0.34
APOE-205ENST00000485628 RNF214Q8ND24 703 aa17.19■□□□□ 0.34
APOE-205ENST00000485628 RSPH1Q8WYR4 309 aa17.19■□□□□ 0.34
APOE-205ENST00000485628 LPPQ93052 612 aa17.19■□□□□ 0.34
APOE-205ENST00000485628 ZNF689Q96CS4 500 aaPredicted RBP17.19■□□□□ 0.34
APOE-205ENST00000485628 C2CD2Q9Y426 696 aa17.19■□□□□ 0.34
APOE-205ENST00000485628 SMIM28A0A1B0GU29 152 aa17.18■□□□□ 0.34
APOE-205ENST00000485628 ARL5CA6NH57 179 aa17.18■□□□□ 0.34
APOE-205ENST00000485628 ACTN1P12814 892 aa17.18■□□□□ 0.34
APOE-205ENST00000485628 GTF2H1P32780 548 aa17.18■□□□□ 0.34
APOE-205ENST00000485628 MAGEA10P43363 369 aaPredicted RBP17.18■□□□□ 0.34
APOE-205ENST00000485628 DEFB103AP81534 67 aa17.18■□□□□ 0.34
APOE-205ENST00000485628 SPAG1Q07617 926 aa17.18■□□□□ 0.34
APOE-205ENST00000485628 PPP3CAQ08209 521 aa17.18■□□□□ 0.34
APOE-205ENST00000485628 SURF1Q15526 300 aa17.18■□□□□ 0.34
APOE-205ENST00000485628 TPD52L1Q16890 204 aaPredicted RBP17.18■□□□□ 0.34
APOE-205ENST00000485628 HACE1Q8IYU2 909 aa17.18■□□□□ 0.34
APOE-205ENST00000485628 CASD1Q96PB1 797 aa17.18■□□□□ 0.34
APOE-205ENST00000485628 PPP1R10Q96QC0 940 aaKnown RBP17.18■□□□□ 0.34
APOE-205ENST00000485628 CGRRF1Q99675 332 aa17.18■□□□□ 0.34
APOE-205ENST00000485628 TUBGCP2Q9BSJ2 902 aa17.18■□□□□ 0.34
APOE-205ENST00000485628 RSAD1Q9HA92 442 aa17.18■□□□□ 0.34
APOE-205ENST00000485628 TOPORSQ9NS56 1045 aaPredicted RBP17.18■□□□□ 0.34
APOE-205ENST00000485628 RNF216Q9NWF9 866 aaPredicted RBP17.18■□□□□ 0.34
APOE-205ENST00000485628 CXXC1Q9P0U4 656 aaPredicted RBP17.18■□□□□ 0.34
APOE-205ENST00000485628 PDE4DIPQ5VU43 2346 aa17.18■□□□□ 0.34
APOE-205ENST00000485628 AP5Z1O43299 807 aa17.17■□□□□ 0.34
APOE-205ENST00000485628 DGKIO75912 1065 aa17.17■□□□□ 0.34
APOE-205ENST00000485628 C4BPAP04003 597 aaKnown RBP17.17■□□□□ 0.34
APOE-205ENST00000485628 PPP2R3AQ06190 1150 aa17.17■□□□□ 0.34
APOE-205ENST00000485628 MAN2A1Q16706 1144 aa17.17■□□□□ 0.34
APOE-205ENST00000485628 HSP90AA4PQ58FG1 418 aa17.17■□□□□ 0.34
APOE-205ENST00000485628 SARM1Q6SZW1 724 aa17.17■□□□□ 0.34
APOE-205ENST00000485628 OTOP2Q7RTS6 562 aa17.17■□□□□ 0.34
APOE-205ENST00000485628 WDR49Q8IV35 697 aa17.17■□□□□ 0.34
APOE-205ENST00000485628 ZFP42Q96MM3 310 aa17.17■□□□□ 0.34
APOE-205ENST00000485628 GAD1Q99259 594 aa17.17■□□□□ 0.34
APOE-205ENST00000485628 POP1Q99575 1024 aaKnown RBP17.17■□□□□ 0.34
APOE-205ENST00000485628 LBHD1Q9BQE6 289 aaPredicted RBP17.17■□□□□ 0.34
APOE-205ENST00000485628 INTS13Q9NVM9 706 aa17.17■□□□□ 0.34
APOE-205ENST00000485628 PLAGL2Q9UPG8 496 aa17.17■□□□□ 0.34
APOE-205ENST00000485628 COQ4Q9Y3A0 265 aa17.17■□□□□ 0.34
APOE-205ENST00000485628 PCDHB7Q9Y5E2 793 aa17.17■□□□□ 0.34
APOE-205ENST00000485628 TDRD15B5MCY1 1934 aaKnown RBP17.16■□□□□ 0.34
APOE-205ENST00000485628 A0A1B0GTH6 734 aa17.16■□□□□ 0.34
APOE-205ENST00000485628 BMP8BP34820 402 aa17.16■□□□□ 0.34
APOE-205ENST00000485628 YARSP54577 528 aaKnown RBP17.16■□□□□ 0.34
APOE-205ENST00000485628 ZACNQ401N2 412 aa17.16■□□□□ 0.34
APOE-205ENST00000485628 CCDC40Q4G0X9 1142 aa17.16■□□□□ 0.34
APOE-205ENST00000485628 JADE1Q6IE81 842 aa17.16■□□□□ 0.34
APOE-205ENST00000485628 DPY19L2P1Q6NXN4 242 aa17.16■□□□□ 0.34
APOE-205ENST00000485628 OR5B17Q8NGF7 314 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms