RNA–Protein interactions for RNA: ENST00000485618.1

SF3A1-208, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 593 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-208ENST00000485618 NELFCDQ8IXH7 590 aa9□□□□□ -0.97
SF3A1-208ENST00000485618 MLKLQ8NB16 471 aa9□□□□□ -0.97
SF3A1-208ENST00000485618 XXYLT1Q8NBI6 393 aa9□□□□□ -0.97
SF3A1-208ENST00000485618 SMG8Q8ND04 991 aaKnown RBP9□□□□□ -0.97
SF3A1-208ENST00000485618 SPATA20Q8TB22 786 aa9□□□□□ -0.97
SF3A1-208ENST00000485618 GDPD5Q8WTR4 605 aa9□□□□□ -0.97
SF3A1-208ENST00000485618 TMEM174Q8WUU8 243 aa9□□□□□ -0.97
SF3A1-208ENST00000485618 CLP1Q92989 425 aaKnown RBP9□□□□□ -0.97
SF3A1-208ENST00000485618 HLA-CQ95604 372 aa9□□□□□ -0.97
SF3A1-208ENST00000485618 PPP2R3CQ969Q6 453 aa9□□□□□ -0.97
SF3A1-208ENST00000485618 UROC1Q96N76 676 aa9□□□□□ -0.97
SF3A1-208ENST00000485618 ZNF558Q96NG5 402 aa9□□□□□ -0.97
SF3A1-208ENST00000485618 CASD1Q96PB1 797 aa9□□□□□ -0.97
SF3A1-208ENST00000485618 GAD1Q99259 594 aa9□□□□□ -0.97
SF3A1-208ENST00000485618 TMEM175Q9BSA9 504 aa9□□□□□ -0.97
SF3A1-208ENST00000485618 COLEC11Q9BWP8 271 aa9□□□□□ -0.97
SF3A1-208ENST00000485618 NXF3Q9H4D5 531 aaKnown RBP9□□□□□ -0.97
SF3A1-208ENST00000485618 ASB7Q9H672 318 aa9□□□□□ -0.97
SF3A1-208ENST00000485618 SNTG2Q9NY99 539 aa9□□□□□ -0.97
SF3A1-208ENST00000485618 SPG21Q9NZD8 308 aa9□□□□□ -0.97
SF3A1-208ENST00000485618 GDAQ9Y2T3 454 aa9□□□□□ -0.97
SF3A1-208ENST00000485618 DERAQ9Y315 318 aa9□□□□□ -0.97
SF3A1-208ENST00000485618 HCN4Q9Y3Q4 1203 aa9□□□□□ -0.97
SF3A1-208ENST00000485618 TCF20Q9UGU0 1960 aaKnown RBP9□□□□□ -0.97
SF3A1-208ENST00000485618 MYO9BQ13459 2157 aa8.99□□□□□ -0.97
SF3A1-208ENST00000485618 CHD7Q9P2D1 2997 aa8.99□□□□□ -0.97
SF3A1-208ENST00000485618 ARHGEF37A1IGU5 675 aa8.99□□□□□ -0.97
SF3A1-208ENST00000485618 LCHNA4D1U4 455 aa8.99□□□□□ -0.97
SF3A1-208ENST00000485618 LINC01553A4QN01 128 aa8.99□□□□□ -0.97
SF3A1-208ENST00000485618 CETN3O15182 167 aa8.99□□□□□ -0.97
SF3A1-208ENST00000485618 INPPL1O15357 1258 aa8.99□□□□□ -0.97
SF3A1-208ENST00000485618 TRAPPC3O43617 180 aa8.99□□□□□ -0.97
SF3A1-208ENST00000485618 EXOC3O60645 756 aa8.99□□□□□ -0.97
SF3A1-208ENST00000485618 RECQL4O94761 1208 aa8.99□□□□□ -0.97
SF3A1-208ENST00000485618 PRR29P0C7W0 189 aa8.99□□□□□ -0.97
SF3A1-208ENST00000485618 KCNE1P15382 129 aa8.99□□□□□ -0.97
SF3A1-208ENST00000485618 RPL9P32969 192 aaKnown RBP8.99□□□□□ -0.97
SF3A1-208ENST00000485618 CTNNB1P35222 781 aa8.99□□□□□ -0.97
SF3A1-208ENST00000485618 BMPR1AP36894 532 aa8.99□□□□□ -0.97
SF3A1-208ENST00000485618 MLH1P40692 756 aa8.99□□□□□ -0.97
SF3A1-208ENST00000485618 CASP5P51878 434 aa8.99□□□□□ -0.97
SF3A1-208ENST00000485618 OSTNP61366 133 aa8.99□□□□□ -0.97
SF3A1-208ENST00000485618 UBE3AQ05086 875 aa8.99□□□□□ -0.97
SF3A1-208ENST00000485618 CLLU1OSQ5K130 101 aa8.99□□□□□ -0.97
SF3A1-208ENST00000485618 CCDC183Q5T5S1 534 aa8.99□□□□□ -0.97
SF3A1-208ENST00000485618 EEF1DP3Q658K8 133 aa8.99□□□□□ -0.97
SF3A1-208ENST00000485618 PDE12Q6L8Q7 609 aaKnown RBP8.99□□□□□ -0.97
SF3A1-208ENST00000485618 SASS6Q6UVJ0 657 aa8.99□□□□□ -0.97
SF3A1-208ENST00000485618 TMCO2Q7Z6W1 182 aaPredicted RBP8.99□□□□□ -0.97
SF3A1-208ENST00000485618 CDR2LQ86X02 465 aaPredicted RBP8.99□□□□□ -0.97
SF3A1-208ENST00000485618 NT5DC4Q86YG4 428 aa8.99□□□□□ -0.97
SF3A1-208ENST00000485618 SLC9A9Q8IVB4 645 aa8.99□□□□□ -0.97
SF3A1-208ENST00000485618 C12orf56Q8IXR9 622 aa8.99□□□□□ -0.97
SF3A1-208ENST00000485618 TMEM192Q8IY95 271 aa8.99□□□□□ -0.97
SF3A1-208ENST00000485618 GPD1LQ8N335 351 aa8.99□□□□□ -0.97
SF3A1-208ENST00000485618 FBXO22Q8NEZ5 403 aa8.99□□□□□ -0.97
SF3A1-208ENST00000485618 NOC3LQ8WTT2 800 aaKnown RBP8.99□□□□□ -0.97
SF3A1-208ENST00000485618 LPPQ93052 612 aa8.99□□□□□ -0.97
SF3A1-208ENST00000485618 P2RX5Q93086 422 aa8.99□□□□□ -0.97
SF3A1-208ENST00000485618 HPS3Q969F9 1004 aa8.99□□□□□ -0.97
SF3A1-208ENST00000485618 TMEM169Q96HH4 297 aa8.99□□□□□ -0.97
SF3A1-208ENST00000485618 ZBTB45Q96K62 511 aaPredicted RBP8.99□□□□□ -0.97
SF3A1-208ENST00000485618 FAM213AQ9BRX8 229 aa8.99□□□□□ -0.97
SF3A1-208ENST00000485618 AGPAT3Q9NRZ7 376 aa8.99□□□□□ -0.97
SF3A1-208ENST00000485618 KLK14Q9P0G3 267 aa8.99□□□□□ -0.97
SF3A1-208ENST00000485618 MTUS1Q9ULD2 1270 aa8.99□□□□□ -0.97
SF3A1-208ENST00000485618 SSX2IPQ9Y2D8 614 aa8.99□□□□□ -0.97
SF3A1-208ENST00000485618 FAN1Q9Y2M0 1017 aa8.99□□□□□ -0.97
SF3A1-208ENST00000485618 HES2Q9Y543 173 aa8.99□□□□□ -0.97
SF3A1-208ENST00000485618 CHD9Q3L8U1 2897 aa8.99□□□□□ -0.97
SF3A1-208ENST00000485618 PTPRSQ13332 1948 aa8.99□□□□□ -0.97
SF3A1-208ENST00000485618 SMIM28A0A1B0GU29 152 aa8.98□□□□□ -0.97
SF3A1-208ENST00000485618 FSD2A1L4K1 749 aa8.98□□□□□ -0.97
SF3A1-208ENST00000485618 TTLL13PA6NNM8 815 aa8.98□□□□□ -0.97
SF3A1-208ENST00000485618 ANKRD63C9JTQ0 380 aa8.98□□□□□ -0.97
SF3A1-208ENST00000485618 STX10O60499 249 aa8.98□□□□□ -0.97
SF3A1-208ENST00000485618 TADA2AO75478 443 aa8.98□□□□□ -0.97
SF3A1-208ENST00000485618 POMCP01189 267 aa8.98□□□□□ -0.97
SF3A1-208ENST00000485618 KRT13P13646 458 aa8.98□□□□□ -0.97
SF3A1-208ENST00000485618 ATF7P17544 494 aaPredicted RBP8.98□□□□□ -0.97
SF3A1-208ENST00000485618 AP3M2P53677 418 aa8.98□□□□□ -0.97
SF3A1-208ENST00000485618 FKBP3Q00688 224 aaKnown RBP8.98□□□□□ -0.97
SF3A1-208ENST00000485618 LRRC63Q05C16 580 aa8.98□□□□□ -0.97
SF3A1-208ENST00000485618 ELAVL2Q12926 359 aaKnown RBP8.98□□□□□ -0.97
SF3A1-208ENST00000485618 TUSC3Q13454 348 aa8.98□□□□□ -0.97
SF3A1-208ENST00000485618 NFIL3Q16649 462 aa8.98□□□□□ -0.97
SF3A1-208ENST00000485618 EDRF1Q3B7T1 1238 aa8.98□□□□□ -0.97
SF3A1-208ENST00000485618 EPC2Q52LR7 807 aa8.98□□□□□ -0.97
SF3A1-208ENST00000485618 FOXR2Q6PJQ5 311 aa8.98□□□□□ -0.97
SF3A1-208ENST00000485618 KCNT2Q6UVM3 1135 aa8.98□□□□□ -0.97
SF3A1-208ENST00000485618 KIAA0895Q8NCT3 520 aa8.98□□□□□ -0.97
SF3A1-208ENST00000485618 BEST2Q8NFU1 509 aa8.98□□□□□ -0.97
SF3A1-208ENST00000485618 FAM212AQ96EL1 285 aa8.98□□□□□ -0.97
SF3A1-208ENST00000485618 FNBP1Q96RU3 617 aa8.98□□□□□ -0.97
SF3A1-208ENST00000485618 NAT10Q9H0A0 1025 aaKnown RBP8.98□□□□□ -0.97
SF3A1-208ENST00000485618 LMAN2LQ9H0V9 348 aa8.98□□□□□ -0.97
SF3A1-208ENST00000485618 RNF39Q9H2S5 420 aa8.98□□□□□ -0.97
SF3A1-208ENST00000485618 EPHX3Q9H6B9 360 aa8.98□□□□□ -0.97
SF3A1-208ENST00000485618 TBC1D13Q9NVG8 400 aa8.98□□□□□ -0.97
SF3A1-208ENST00000485618 RBAKQ9NYW8 714 aaPredicted RBP8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms