RNA–Protein interactions for RNA: ENST00000485027.5

KPNA1-208, Transcript of karyopherin subunit alpha 1, humanhuman

TSL 2

Gene KPNA1, Length 1,843 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNA1-208ENST00000485027 SCG2P13521 617 aa6.7□□□□□ -1.34
KPNA1-208ENST00000485027 PTGIRP43119 386 aa6.7□□□□□ -1.34
KPNA1-208ENST00000485027 GSK3AP49840 483 aa6.7□□□□□ -1.34
KPNA1-208ENST00000485027 CCT2P78371 535 aaKnown RBP6.7□□□□□ -1.34
KPNA1-208ENST00000485027 PCDH1Q08174 1060 aa6.7□□□□□ -1.34
KPNA1-208ENST00000485027 ACVR2BQ13705 512 aa6.7□□□□□ -1.34
KPNA1-208ENST00000485027 AUHQ13825 339 aaKnown RBP6.7□□□□□ -1.34
KPNA1-208ENST00000485027 ANKRD39Q53RE8 183 aa6.7□□□□□ -1.34
KPNA1-208ENST00000485027 GNASQ5JWF2 1037 aa6.7□□□□□ -1.34
KPNA1-208ENST00000485027 SESTD1Q86VW0 696 aa6.7□□□□□ -1.34
KPNA1-208ENST00000485027 RIOX2Q8IUF8 465 aa6.7□□□□□ -1.34
KPNA1-208ENST00000485027 MRPL50Q8N5N7 158 aaKnown RBP6.7□□□□□ -1.34
KPNA1-208ENST00000485027 DCAF4Q8WV16 495 aa6.7□□□□□ -1.34
KPNA1-208ENST00000485027 CNDP1Q96KN2 507 aa6.7□□□□□ -1.34
KPNA1-208ENST00000485027 GSDMAQ96QA5 445 aa6.7□□□□□ -1.34
KPNA1-208ENST00000485027 MPHOSPH9Q99550 1183 aa6.7□□□□□ -1.34
KPNA1-208ENST00000485027 EMILIN2Q9BXX0 1053 aa6.7□□□□□ -1.34
KPNA1-208ENST00000485027 RPAP3Q9H6T3 665 aaPredicted RBP6.7□□□□□ -1.34
KPNA1-208ENST00000485027 ZNF395Q9H8N7 513 aaPredicted RBP6.7□□□□□ -1.34
KPNA1-208ENST00000485027 ARMT1Q9H993 441 aa6.7□□□□□ -1.34
KPNA1-208ENST00000485027 BRD7Q9NPI1 651 aa6.7□□□□□ -1.34
KPNA1-208ENST00000485027 COQ3Q9NZJ6 369 aa6.7□□□□□ -1.34
KPNA1-208ENST00000485027 CTNNA3Q9UI47 895 aa6.7□□□□□ -1.34
KPNA1-208ENST00000485027 RASAL2Q9UJF2 1139 aa6.7□□□□□ -1.34
KPNA1-208ENST00000485027 EDARQ9UNE0 448 aa6.7□□□□□ -1.34
KPNA1-208ENST00000485027 ROBO1Q9Y6N7 1651 aa6.7□□□□□ -1.34
KPNA1-208ENST00000485027 NT5C1B-RDH14C9J2C7 533 aa6.69□□□□□ -1.34
KPNA1-208ENST00000485027 NDC80O14777 642 aa6.69□□□□□ -1.34
KPNA1-208ENST00000485027 SGSM2O43147 1006 aa6.69□□□□□ -1.34
KPNA1-208ENST00000485027 RRP9O43818 475 aaKnown RBP6.69□□□□□ -1.34
KPNA1-208ENST00000485027 TSPAN3O60637 253 aa6.69□□□□□ -1.34
KPNA1-208ENST00000485027 RARAP10276 462 aa6.69□□□□□ -1.34
KPNA1-208ENST00000485027 GAP43P17677 238 aa6.69□□□□□ -1.34
KPNA1-208ENST00000485027 MSH2P43246 934 aa6.69□□□□□ -1.34
KPNA1-208ENST00000485027 RRP1P56182 461 aaKnown RBP6.69□□□□□ -1.34
KPNA1-208ENST00000485027 RAB1AP62820 205 aa6.69□□□□□ -1.34
KPNA1-208ENST00000485027 PHC1P78364 1004 aa6.69□□□□□ -1.34
KPNA1-208ENST00000485027 SLC14A1Q13336 389 aa6.69□□□□□ -1.34
KPNA1-208ENST00000485027 TMEM266Q2M3C6 531 aa6.69□□□□□ -1.34
KPNA1-208ENST00000485027 MAJINQ3KP22 176 aa6.69□□□□□ -1.34
KPNA1-208ENST00000485027 TTC39AQ5SRH9 613 aa6.69□□□□□ -1.34
KPNA1-208ENST00000485027 DCLRE1AQ6PJP8 1040 aa6.69□□□□□ -1.34
KPNA1-208ENST00000485027 PPP1R42Q7Z4L9 355 aa6.69□□□□□ -1.34
KPNA1-208ENST00000485027 THAP5Q7Z6K1 395 aa6.69□□□□□ -1.34
KPNA1-208ENST00000485027 VSIG10LQ86VR7 867 aa6.69□□□□□ -1.34
KPNA1-208ENST00000485027 CCDC144CPQ8IYA2 1237 aa6.69□□□□□ -1.34
KPNA1-208ENST00000485027 SH3RF3Q8TEJ3 882 aaPredicted RBP6.69□□□□□ -1.34
KPNA1-208ENST00000485027 KRT35Q92764 455 aa6.69□□□□□ -1.34
KPNA1-208ENST00000485027 ARHGEF2Q92974 986 aaKnown RBP6.69□□□□□ -1.34
KPNA1-208ENST00000485027 ASIC4Q96FT7 647 aa6.69□□□□□ -1.34
KPNA1-208ENST00000485027 ZNF764Q96H86 408 aaPredicted RBP6.69□□□□□ -1.34
KPNA1-208ENST00000485027 TRERF1Q96PN7 1200 aa6.69□□□□□ -1.34
KPNA1-208ENST00000485027 GBP3Q9H0R5 595 aa6.69□□□□□ -1.34
KPNA1-208ENST00000485027 NKX2-4Q9H2Z4 354 aa6.69□□□□□ -1.34
KPNA1-208ENST00000485027 PRDM13Q9H4Q3 707 aa6.69□□□□□ -1.34
KPNA1-208ENST00000485027 PTPRUQ92729 1446 aa6.69□□□□□ -1.34
KPNA1-208ENST00000485027 SOWAHBA6NEL2 793 aa6.69□□□□□ -1.34
KPNA1-208ENST00000485027 IQCJ-SCHIP1C9J366 451 aaPredicted RBP6.69□□□□□ -1.34
KPNA1-208ENST00000485027 ZBTB43O43298 467 aa6.69□□□□□ -1.34
KPNA1-208ENST00000485027 MSCO60682 206 aa6.69□□□□□ -1.34
KPNA1-208ENST00000485027 KRT37O76014 449 aa6.69□□□□□ -1.34
KPNA1-208ENST00000485027 BEST1O76090 585 aa6.69□□□□□ -1.34
KPNA1-208ENST00000485027 ADH1CP00326 375 aa6.69□□□□□ -1.34
KPNA1-208ENST00000485027 C6P13671 934 aa6.69□□□□□ -1.34
KPNA1-208ENST00000485027 TFEBP19484 476 aa6.69□□□□□ -1.34
KPNA1-208ENST00000485027 CD247P20963 164 aa6.69□□□□□ -1.34
KPNA1-208ENST00000485027 ATP11AP98196 1134 aa6.69□□□□□ -1.34
KPNA1-208ENST00000485027 CREB5Q02930 508 aa6.69□□□□□ -1.34
KPNA1-208ENST00000485027 C19orf57Q0VDD7 668 aa6.69□□□□□ -1.34
KPNA1-208ENST00000485027 ANKRD1Q15327 319 aa6.69□□□□□ -1.34
KPNA1-208ENST00000485027 ARSJQ5FYB0 599 aaPredicted RBP6.69□□□□□ -1.34
KPNA1-208ENST00000485027 C10orf76Q5T2E6 689 aa6.69□□□□□ -1.34
KPNA1-208ENST00000485027 CIAPIN1Q6FI81 312 aa6.69□□□□□ -1.34
KPNA1-208ENST00000485027 KCNK18Q7Z418 384 aa6.69□□□□□ -1.34
KPNA1-208ENST00000485027 ANKRD35Q8N283 1001 aa6.69□□□□□ -1.34
KPNA1-208ENST00000485027 TXLNBQ8N3L3 684 aa6.69□□□□□ -1.34
KPNA1-208ENST00000485027 ARHGEF39Q8N4T4 335 aa6.69□□□□□ -1.34
KPNA1-208ENST00000485027 DENND1AQ8TEH3 1009 aa6.69□□□□□ -1.34
KPNA1-208ENST00000485027 ELF4Q99607 663 aaPredicted RBP6.69□□□□□ -1.34
KPNA1-208ENST00000485027 PHF20Q9BVI0 1012 aa6.69□□□□□ -1.34
KPNA1-208ENST00000485027 COLEC11Q9BWP8 271 aa6.69□□□□□ -1.34
KPNA1-208ENST00000485027 GRIP2Q9C0E4 1043 aa6.69□□□□□ -1.34
KPNA1-208ENST00000485027 RASSF4Q9H2L5 321 aa6.69□□□□□ -1.34
KPNA1-208ENST00000485027 MLXIPQ9HAP2 919 aa6.69□□□□□ -1.34
KPNA1-208ENST00000485027 WHRNQ9P202 907 aa6.69□□□□□ -1.34
KPNA1-208ENST00000485027 ZNF624Q9P2J8 865 aaPredicted RBP6.69□□□□□ -1.34
KPNA1-208ENST00000485027 PCSK1NQ9UHG2 260 aa6.69□□□□□ -1.34
KPNA1-208ENST00000485027 ITM2BQ9Y287 266 aa6.69□□□□□ -1.34
KPNA1-208ENST00000485027 NPFFR2Q9Y5X5 522 aa6.69□□□□□ -1.34
KPNA1-208ENST00000485027 PRAG1Q86YV5 1406 aa6.68□□□□□ -1.34
KPNA1-208ENST00000485027 MYOM2P54296 1465 aa6.68□□□□□ -1.34
KPNA1-208ENST00000485027 NRXN1Q9ULB1 1477 aa6.68□□□□□ -1.34
KPNA1-208ENST00000485027 PIK3R4Q99570 1358 aa6.68□□□□□ -1.34
KPNA1-208ENST00000485027 AGAP14A8MT82 685 aa6.68□□□□□ -1.34
KPNA1-208ENST00000485027 DTNBO60941 627 aa6.68□□□□□ -1.34
KPNA1-208ENST00000485027 S1PR4O95977 384 aa6.68□□□□□ -1.34
KPNA1-208ENST00000485027 PTPRAP18433 802 aa6.68□□□□□ -1.34
KPNA1-208ENST00000485027 CHMP24386 653 aa6.68□□□□□ -1.34
KPNA1-208ENST00000485027 TLX1P31314 330 aaPredicted RBP6.68□□□□□ -1.34
KPNA1-208ENST00000485027 MLH1P40692 756 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms