RNA–Protein interactions for RNA: ENST00000484855.2

CTSA-207, Transcript of cathepsin A, humanhuman

TSL 1 (best)

Gene CTSA, Length 2,183 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-207ENST00000484855 SHC3Q92529 594 aa18.03■□□□□ 0.48
CTSA-207ENST00000484855 ZIC5Q96T25 663 aa18.03■□□□□ 0.48
CTSA-207ENST00000484855 AGPAT1Q99943 283 aa18.03■□□□□ 0.48
CTSA-207ENST00000484855 SEPT11Q9NVA2 429 aaKnown RBP18.03■□□□□ 0.48
CTSA-207ENST00000484855 SAR1BQ9Y6B6 198 aa18.03■□□□□ 0.48
CTSA-207ENST00000484855 TMEM88BA6NKF7 163 aa18.02■□□□□ 0.48
CTSA-207ENST00000484855 CA12O43570 354 aa18.02■□□□□ 0.48
CTSA-207ENST00000484855 ZEB2O60315 1214 aa18.02■□□□□ 0.48
CTSA-207ENST00000484855 H2AFZP0C0S5 128 aa18.02■□□□□ 0.48
CTSA-207ENST00000484855 ERCC6LQ2NKX8 1250 aa18.02■□□□□ 0.48
CTSA-207ENST00000484855 WDR44Q5JSH3 913 aa18.02■□□□□ 0.48
CTSA-207ENST00000484855 MARCH8Q5T0T0 291 aa18.02■□□□□ 0.48
CTSA-207ENST00000484855 H2AFVQ71UI9 128 aa18.02■□□□□ 0.48
CTSA-207ENST00000484855 ENOSF1Q7L5Y1 443 aa18.02■□□□□ 0.48
CTSA-207ENST00000484855 IFNLR1Q8IU57 520 aaPredicted RBP18.02■□□□□ 0.48
CTSA-207ENST00000484855 UBXN4Q92575 508 aa18.02■□□□□ 0.48
CTSA-207ENST00000484855 TATDN2Q93075 761 aa18.02■□□□□ 0.48
CTSA-207ENST00000484855 ELMO3Q96BJ8 720 aa18.02■□□□□ 0.48
CTSA-207ENST00000484855 FAM81BQ96LP2 452 aa18.02■□□□□ 0.48
CTSA-207ENST00000484855 PTPRHQ9HD43 1115 aa18.02■□□□□ 0.48
CTSA-207ENST00000484855 TNFSF13BQ9Y275 285 aa18.02■□□□□ 0.48
CTSA-207ENST00000484855 RRN3P2A6NIE6 340 aa18.01■□□□□ 0.47
CTSA-207ENST00000484855 F2P00734 622 aa18.01■□□□□ 0.47
CTSA-207ENST00000484855 CHMP4BP1P59074 171 aa18.01■□□□□ 0.47
CTSA-207ENST00000484855 GCNT1Q02742 428 aa18.01■□□□□ 0.47
CTSA-207ENST00000484855 FAM187BQ17R55 369 aa18.01■□□□□ 0.47
CTSA-207ENST00000484855 SRGAP1Q7Z6B7 1085 aa18.01■□□□□ 0.47
CTSA-207ENST00000484855 DNAAF5Q86Y56 855 aa18.01■□□□□ 0.47
CTSA-207ENST00000484855 SLC20A1Q8WUM9 679 aa18.01■□□□□ 0.47
CTSA-207ENST00000484855 NLRP7Q8WX94 980 aa18.01■□□□□ 0.47
CTSA-207ENST00000484855 HHIPL1Q96JK4 782 aa18.01■□□□□ 0.47
CTSA-207ENST00000484855 SCLT1Q96NL6 688 aa18.01■□□□□ 0.47
CTSA-207ENST00000484855 CPSF3Q9UKF6 684 aaKnown RBP18.01■□□□□ 0.47
CTSA-207ENST00000484855 INTUQ9ULD6 942 aa18.01■□□□□ 0.47
CTSA-207ENST00000484855 VNN1O95497 513 aa18.01■□□□□ 0.47
CTSA-207ENST00000484855 TFRCP02786 760 aaKnown RBP18.01■□□□□ 0.47
CTSA-207ENST00000484855 IQCF3P0C7M6 154 aa18.01■□□□□ 0.47
CTSA-207ENST00000484855 CTGFP29279 349 aa18.01■□□□□ 0.47
CTSA-207ENST00000484855 RBM10P98175 930 aaKnown RBP18.01■□□□□ 0.47
CTSA-207ENST00000484855 EEF1DP3Q658K8 133 aa18.01■□□□□ 0.47
CTSA-207ENST00000484855 WDR49Q8IV35 697 aa18.01■□□□□ 0.47
CTSA-207ENST00000484855 OR5B17Q8NGF7 314 aa18.01■□□□□ 0.47
CTSA-207ENST00000484855 FAM212AQ96EL1 285 aa18.01■□□□□ 0.47
CTSA-207ENST00000484855 SETD4Q9NVD3 440 aa18.01■□□□□ 0.47
CTSA-207ENST00000484855 PUF60Q9UHX1 559 aaKnown RBP18.01■□□□□ 0.47
CTSA-207ENST00000484855 KIF3CO14782 793 aa18■□□□□ 0.47
CTSA-207ENST00000484855 CYP26A1O43174 497 aa18■□□□□ 0.47
CTSA-207ENST00000484855 CSDE1O75534 798 aaKnown RBP18■□□□□ 0.47
CTSA-207ENST00000484855 CPT1AP50416 773 aa18■□□□□ 0.47
CTSA-207ENST00000484855 AP3M2P53677 418 aa18■□□□□ 0.47
CTSA-207ENST00000484855 SURF1Q15526 300 aa18■□□□□ 0.47
CTSA-207ENST00000484855 CDR2LQ86X02 465 aaPredicted RBP18■□□□□ 0.47
CTSA-207ENST00000484855 THNSL1Q8IYQ7 743 aa18■□□□□ 0.47
CTSA-207ENST00000484855 EPS8L1Q8TE68 723 aa18■□□□□ 0.47
CTSA-207ENST00000484855 LMBR1Q8WVP7 490 aa18■□□□□ 0.47
CTSA-207ENST00000484855 AP5M1Q9H0R1 490 aa18■□□□□ 0.47
CTSA-207ENST00000484855 TMCO5BA8MYB1 307 aa18■□□□□ 0.47
CTSA-207ENST00000484855 PHACTR2O75167 634 aa18■□□□□ 0.47
CTSA-207ENST00000484855 PALMO75781 387 aa18■□□□□ 0.47
CTSA-207ENST00000484855 SGPL1O95470 568 aa18■□□□□ 0.47
CTSA-207ENST00000484855 SMIM10L2AP0DMW4 78 aa18■□□□□ 0.47
CTSA-207ENST00000484855 SMIM10L2BP0DMW5 78 aa18■□□□□ 0.47
CTSA-207ENST00000484855 AMHR2Q16671 573 aa18■□□□□ 0.47
CTSA-207ENST00000484855 NFRKBQ6P4R8 1299 aa18■□□□□ 0.47
CTSA-207ENST00000484855 RPUSD2Q8IZ73 545 aaKnown RBP18■□□□□ 0.47
CTSA-207ENST00000484855 DHX38Q92620 1227 aaKnown RBP18■□□□□ 0.47
CTSA-207ENST00000484855 GOLGA1Q92805 767 aa18■□□□□ 0.47
CTSA-207ENST00000484855 KAT2BQ92831 832 aa18■□□□□ 0.47
CTSA-207ENST00000484855 CDT1Q9H211 546 aa18■□□□□ 0.47
CTSA-207ENST00000484855 TRIP12Q14669 1992 aaPredicted RBP17.99■□□□□ 0.47
CTSA-207ENST00000484855 SRGAP2O75044 1071 aa17.99■□□□□ 0.47
CTSA-207ENST00000484855 IGHA2P01877 340 aa17.99■□□□□ 0.47
CTSA-207ENST00000484855 IRX5P78411 483 aaPredicted RBP17.99■□□□□ 0.47
CTSA-207ENST00000484855 IFI16Q16666 785 aaKnown RBP17.99■□□□□ 0.47
CTSA-207ENST00000484855 TEX35Q5T0J7 233 aa17.99■□□□□ 0.47
CTSA-207ENST00000484855 CYP4F22Q6NT55 531 aa17.99■□□□□ 0.47
CTSA-207ENST00000484855 KIAA0319LQ8IZA0 1049 aa17.99■□□□□ 0.47
CTSA-207ENST00000484855 PCDHGC5Q9Y5F6 944 aa17.99■□□□□ 0.47
CTSA-207ENST00000484855 NRCAMQ92823 1304 aa17.99■□□□□ 0.47
CTSA-207ENST00000484855 CLSTN1O94985 981 aa17.98■□□□□ 0.47
CTSA-207ENST00000484855 KRT5P13647 590 aa17.98■□□□□ 0.47
CTSA-207ENST00000484855 PDE6CP51160 858 aa17.98■□□□□ 0.47
CTSA-207ENST00000484855 GALCP54803 685 aa17.98■□□□□ 0.47
CTSA-207ENST00000484855 FCGRTP55899 365 aa17.98■□□□□ 0.47
CTSA-207ENST00000484855 OSTNP61366 133 aa17.98■□□□□ 0.47
CTSA-207ENST00000484855 MFSD10Q14728 455 aa17.98■□□□□ 0.47
CTSA-207ENST00000484855 SPOPLQ6IQ16 392 aa17.98■□□□□ 0.47
CTSA-207ENST00000484855 NOP9Q86U38 636 aaKnown RBP17.98■□□□□ 0.47
CTSA-207ENST00000484855 ZNF410Q86VK4 478 aa17.98■□□□□ 0.47
CTSA-207ENST00000484855 SLC47A2Q86VL8 602 aa17.98■□□□□ 0.47
CTSA-207ENST00000484855 PALB2Q86YC2 1186 aa17.98■□□□□ 0.47
CTSA-207ENST00000484855 CEP120Q8N960 986 aa17.98■□□□□ 0.47
CTSA-207ENST00000484855 NOCTQ9UK39 431 aaKnown RBP17.98■□□□□ 0.47
CTSA-207ENST00000484855 SNX12Q9UMY4 172 aa17.98■□□□□ 0.47
CTSA-207ENST00000484855 Q9Y3F1 56 aa17.98■□□□□ 0.47
CTSA-207ENST00000484855 A0A0A6YYK5 440 aaPredicted RBP17.98■□□□□ 0.47
CTSA-207ENST00000484855 MYL3P08590 195 aa17.98■□□□□ 0.47
CTSA-207ENST00000484855 NOP2P46087 812 aaKnown RBP17.98■□□□□ 0.47
CTSA-207ENST00000484855 NCOA4Q13772 614 aa17.98■□□□□ 0.47
CTSA-207ENST00000484855 TAF3Q5VWG9 929 aa17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms