RNA–Protein interactions for RNA: ENST00000483851.6

SHOX2-204, Transcript of short stature homeobox 2, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SHOX2, Length 1,866 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-204ENST00000483851 TRIB2Q92519 343 aa28.33■■■□□ 2.13
SHOX2-204ENST00000483851 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP28.33■■■□□ 2.13
SHOX2-204ENST00000483851 GABRQQ9UN88 632 aa28.33■■■□□ 2.13
SHOX2-204ENST00000483851 ABL1P00519 1130 aa28.32■■■□□ 2.12
SHOX2-204ENST00000483851 ZBTB41Q5SVQ8 909 aa28.32■■■□□ 2.12
SHOX2-204ENST00000483851 TRPV1Q8NER1 839 aa28.32■■■□□ 2.12
SHOX2-204ENST00000483851 NLRP7Q8WX94 980 aa28.32■■■□□ 2.12
SHOX2-204ENST00000483851 FOXN3O00409 490 aaPredicted RBP28.32■■■□□ 2.12
SHOX2-204ENST00000483851 MCF2P10911 925 aa28.32■■■□□ 2.12
SHOX2-204ENST00000483851 ARHGAP44Q17R89 818 aa28.32■■■□□ 2.12
SHOX2-204ENST00000483851 TMEM132AQ24JP5 1023 aa28.32■■■□□ 2.12
SHOX2-204ENST00000483851 ZBTB33Q86T24 672 aa28.32■■■□□ 2.12
SHOX2-204ENST00000483851 HELQQ8TDG4 1101 aa28.32■■■□□ 2.12
SHOX2-204ENST00000483851 LENG1Q96BZ8 264 aaPredicted RBP28.32■■■□□ 2.12
SHOX2-204ENST00000483851 UPF3AQ9H1J1 476 aaKnown RBP28.32■■■□□ 2.12
SHOX2-204ENST00000483851 MYL3P08590 195 aa28.31■■■□□ 2.12
SHOX2-204ENST00000483851 IQCF3P0C7M6 154 aa28.31■■■□□ 2.12
SHOX2-204ENST00000483851 GNAT1P11488 350 aa28.31■■■□□ 2.12
SHOX2-204ENST00000483851 APLP1P51693 650 aa28.31■■■□□ 2.12
SHOX2-204ENST00000483851 NAB2Q15742 525 aa28.31■■■□□ 2.12
SHOX2-204ENST00000483851 RNF10Q8N5U6 811 aaKnown RBP28.31■■■□□ 2.12
SHOX2-204ENST00000483851 SHC3Q92529 594 aa28.31■■■□□ 2.12
SHOX2-204ENST00000483851 NENFQ9UMX5 172 aa28.31■■■□□ 2.12
SHOX2-204ENST00000483851 CTAGE9A4FU28 777 aa28.3■■■□□ 2.12
SHOX2-204ENST00000483851 B4GALT5O43286 388 aa28.3■■■□□ 2.12
SHOX2-204ENST00000483851 PURAQ00577 322 aaKnown RBP28.3■■■□□ 2.12
SHOX2-204ENST00000483851 WDR44Q5JSH3 913 aa28.3■■■□□ 2.12
SHOX2-204ENST00000483851 FAM71AQ8IYT1 594 aa28.3■■■□□ 2.12
SHOX2-204ENST00000483851 SLC35F6Q8N357 371 aa28.3■■■□□ 2.12
SHOX2-204ENST00000483851 PPM1KQ8N3J5 372 aa28.3■■■□□ 2.12
SHOX2-204ENST00000483851 MNS1Q8NEH6 495 aa28.3■■■□□ 2.12
SHOX2-204ENST00000483851 SECISBP2LQ93073 1101 aaKnown RBP28.3■■■□□ 2.12
SHOX2-204ENST00000483851 SYT11Q9BT88 431 aa28.3■■■□□ 2.12
SHOX2-204ENST00000483851 CDT1Q9H211 546 aa28.3■■■□□ 2.12
SHOX2-204ENST00000483851 SPC25Q9HBM1 224 aa28.3■■■□□ 2.12
SHOX2-204ENST00000483851 TRIM10Q9UDY6 481 aa28.3■■■□□ 2.12
SHOX2-204ENST00000483851 NAGPAQ9UK23 515 aa28.3■■■□□ 2.12
SHOX2-204ENST00000483851 INTUQ9ULD6 942 aa28.3■■■□□ 2.12
SHOX2-204ENST00000483851 SEPT4O43236 478 aa28.29■■■□□ 2.12
SHOX2-204ENST00000483851 HARSP12081 509 aaKnown RBP28.29■■■□□ 2.12
SHOX2-204ENST00000483851 PRKCZQ05513 592 aa28.29■■■□□ 2.12
SHOX2-204ENST00000483851 ENOX2Q16206 610 aaKnown RBP28.29■■■□□ 2.12
SHOX2-204ENST00000483851 TDRD10Q5VZ19 366 aaKnown RBP28.29■■■□□ 2.12
SHOX2-204ENST00000483851 ZNF668Q96K58 619 aaPredicted RBP28.29■■■□□ 2.12
SHOX2-204ENST00000483851 C1orf112Q9NSG2 853 aa28.29■■■□□ 2.12
SHOX2-204ENST00000483851 BTNL10A8MVZ5 291 aa28.29■■■□□ 2.12
SHOX2-204ENST00000483851 IL18RAPO95256 599 aa28.29■■■□□ 2.12
SHOX2-204ENST00000483851 HOXC8P31273 242 aa28.29■■■□□ 2.12
SHOX2-204ENST00000483851 WNT7BP56706 349 aa28.29■■■□□ 2.12
SHOX2-204ENST00000483851 GPIHBP1Q8IV16 184 aa28.29■■■□□ 2.12
SHOX2-204ENST00000483851 SLC30A5Q8TAD4 765 aa28.29■■■□□ 2.12
SHOX2-204ENST00000483851 KREMEN1Q96MU8 473 aa28.29■■■□□ 2.12
SHOX2-204ENST00000483851 SCLT1Q96NL6 688 aa28.29■■■□□ 2.12
SHOX2-204ENST00000483851 NAPGQ99747 312 aaPredicted RBP28.29■■■□□ 2.12
SHOX2-204ENST00000483851 GCOM2Q9BZD3 368 aaPredicted RBP28.29■■■□□ 2.12
SHOX2-204ENST00000483851 ADAMTS10Q9H324 1103 aa28.29■■■□□ 2.12
SHOX2-204ENST00000483851 LRRN2O75325 713 aa28.28■■■□□ 2.12
SHOX2-204ENST00000483851 TBC1D8O95759 1140 aa28.28■■■□□ 2.12
SHOX2-204ENST00000483851 HLA-DRAP01903 254 aa28.28■■■□□ 2.12
SHOX2-204ENST00000483851 CYP2C9P11712 490 aa28.28■■■□□ 2.12
SHOX2-204ENST00000483851 HOXD10P28358 340 aa28.28■■■□□ 2.12
SHOX2-204ENST00000483851 MAP2K2P36507 400 aa28.28■■■□□ 2.12
SHOX2-204ENST00000483851 TNFSF9P41273 254 aa28.28■■■□□ 2.12
SHOX2-204ENST00000483851 BEX3Q00994 111 aa28.28■■■□□ 2.12
SHOX2-204ENST00000483851 BIRC3Q13489 604 aa28.28■■■□□ 2.12
SHOX2-204ENST00000483851 EEF1DP3Q658K8 133 aa28.28■■■□□ 2.12
SHOX2-204ENST00000483851 ALKBH5Q6P6C2 394 aaKnown RBP28.28■■■□□ 2.12
SHOX2-204ENST00000483851 RSRC2Q7L4I2 434 aaKnown RBP28.28■■■□□ 2.12
SHOX2-204ENST00000483851 TRIM58Q8NG06 486 aa28.28■■■□□ 2.12
SHOX2-204ENST00000483851 UBXN4Q92575 508 aa28.28■■■□□ 2.12
SHOX2-204ENST00000483851 B4GALT4O60513 344 aa28.27■■■□□ 2.12
SHOX2-204ENST00000483851 ERLIN2O94905 339 aa28.27■■■□□ 2.12
SHOX2-204ENST00000483851 PIK3CAP42336 1068 aa28.27■■■□□ 2.12
SHOX2-204ENST00000483851 APBB1IPQ7Z5R6 666 aaPredicted RBP28.27■■■□□ 2.12
SHOX2-204ENST00000483851 PTPRJQ12913 1337 aa28.27■■■□□ 2.12
SHOX2-204ENST00000483851 CLTAP09496 248 aa28.27■■■□□ 2.12
SHOX2-204ENST00000483851 PNMA6AP0CW24 399 aaPredicted RBP28.27■■■□□ 2.12
SHOX2-204ENST00000483851 DUOXA2Q1HG44 320 aa28.27■■■□□ 2.12
SHOX2-204ENST00000483851 NME8Q8N427 588 aa28.27■■■□□ 2.12
SHOX2-204ENST00000483851 ARID3AQ99856 593 aa28.27■■■□□ 2.12
SHOX2-204ENST00000483851 MTG1Q9BT17 334 aaPredicted RBP28.27■■■□□ 2.12
SHOX2-204ENST00000483851 PDZD7Q9H5P4 517 aa28.27■■■□□ 2.12
SHOX2-204ENST00000483851 A0A1B0GUA9 196 aa28.26■■■□□ 2.11
SHOX2-204ENST00000483851 GPR32O75388 356 aa28.26■■■□□ 2.11
SHOX2-204ENST00000483851 TACC1O75410 805 aa28.26■■■□□ 2.11
SHOX2-204ENST00000483851 C6orf222P0C671 652 aaPredicted RBP28.26■■■□□ 2.11
SHOX2-204ENST00000483851 ARF4P18085 180 aaPredicted RBP28.26■■■□□ 2.11
SHOX2-204ENST00000483851 RPF1Q9H9Y2 349 aaKnown RBP28.26■■■□□ 2.11
SHOX2-204ENST00000483851 TFR2Q9UP52 801 aa28.26■■■□□ 2.11
SHOX2-204ENST00000483851 ANO9A1A5B4 782 aa28.25■■■□□ 2.11
SHOX2-204ENST00000483851 C17orf102A2RUQ5 167 aa28.25■■■□□ 2.11
SHOX2-204ENST00000483851 TULP1O00294 542 aaPredicted RBP28.25■■■□□ 2.11
SHOX2-204ENST00000483851 DDX3XO00571 662 aaKnown RBP eCLIP28.25■■■□□ 2.11
SHOX2-204ENST00000483851 TSPAN1O60635 241 aa28.25■■■□□ 2.11
SHOX2-204ENST00000483851 VNN1O95497 513 aa28.25■■■□□ 2.11
SHOX2-204ENST00000483851 RARBP10826 455 aa28.25■■■□□ 2.11
SHOX2-204ENST00000483851 SEZ6Q53EL9 994 aa28.25■■■□□ 2.11
SHOX2-204ENST00000483851 GNRH1P01148 92 aa28.25■■■□□ 2.11
SHOX2-204ENST00000483851 LMBRD2Q68DH5 695 aaPredicted RBP28.25■■■□□ 2.11
SHOX2-204ENST00000483851 THNSL1Q8IYQ7 743 aa28.25■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms