RNA–Protein interactions for RNA: ENST00000483723.5

CLK3-204, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 1,749 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-204ENST00000483723 VNN1O95497 513 aa15.17■□□□□ 0.02
CLK3-204ENST00000483723 HOXC8P31273 242 aa15.17■□□□□ 0.02
CLK3-204ENST00000483723 TNFSF9P41273 254 aa15.17■□□□□ 0.02
CLK3-204ENST00000483723 FLT3LGP49771 235 aa15.17■□□□□ 0.02
CLK3-204ENST00000483723 GJA9P57773 515 aa15.17■□□□□ 0.02
CLK3-204ENST00000483723 GCNT1Q02742 428 aa15.17■□□□□ 0.02
CLK3-204ENST00000483723 ENOX2Q16206 610 aaKnown RBP15.17■□□□□ 0.02
CLK3-204ENST00000483723 MFSD14CQ5VZR4 134 aa15.17■□□□□ 0.02
CLK3-204ENST00000483723 NFRKBQ6P4R8 1299 aa15.17■□□□□ 0.02
CLK3-204ENST00000483723 PAXIP1Q6ZW49 1069 aaPredicted RBP15.17■□□□□ 0.02
CLK3-204ENST00000483723 ENOSF1Q7L5Y1 443 aa15.17■□□□□ 0.02
CLK3-204ENST00000483723 VPS36Q86VN1 386 aa15.17■□□□□ 0.02
CLK3-204ENST00000483723 TRIB2Q92519 343 aa15.17■□□□□ 0.02
CLK3-204ENST00000483723 KAT5Q92993 513 aa15.17■□□□□ 0.02
CLK3-204ENST00000483723 TATDN2Q93075 761 aa15.17■□□□□ 0.02
CLK3-204ENST00000483723 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.17■□□□□ 0.02
CLK3-204ENST00000483723 CDT1Q9H211 546 aa15.17■□□□□ 0.02
CLK3-204ENST00000483723 ADAMTS10Q9H324 1103 aa15.17■□□□□ 0.02
CLK3-204ENST00000483723 CREBZFQ9NS37 354 aa15.17■□□□□ 0.02
CLK3-204ENST00000483723 INTUQ9ULD6 942 aa15.17■□□□□ 0.02
CLK3-204ENST00000483723 ANK1P16157 1881 aa15.16■□□□□ 0.02
CLK3-204ENST00000483723 CTAGE9A4FU28 777 aa15.16■□□□□ 0.02
CLK3-204ENST00000483723 GPR25O00155 361 aa15.16■□□□□ 0.02
CLK3-204ENST00000483723 SLU7O95391 586 aaKnown RBP15.16■□□□□ 0.02
CLK3-204ENST00000483723 HLA-DRAP01903 254 aa15.16■□□□□ 0.02
CLK3-204ENST00000483723 MCF2P10911 925 aa15.16■□□□□ 0.02
CLK3-204ENST00000483723 CAP1Q01518 475 aa15.16■□□□□ 0.02
CLK3-204ENST00000483723 HIC1Q14526 733 aa15.16■□□□□ 0.02
CLK3-204ENST00000483723 FSCN1Q16658 493 aaKnown RBP15.16■□□□□ 0.02
CLK3-204ENST00000483723 SEZ6Q53EL9 994 aa15.16■□□□□ 0.02
CLK3-204ENST00000483723 ALKBH5Q6P6C2 394 aaKnown RBP15.16■□□□□ 0.02
CLK3-204ENST00000483723 WDR49Q8IV35 697 aa15.16■□□□□ 0.02
CLK3-204ENST00000483723 DNAJC5GQ8N7S2 189 aa15.16■□□□□ 0.02
CLK3-204ENST00000483723 LNX1Q8TBB1 728 aaPredicted RBP15.16■□□□□ 0.02
CLK3-204ENST00000483723 KATNAL1Q9BW62 490 aa15.16■□□□□ 0.02
CLK3-204ENST00000483723 UPF3AQ9H1J1 476 aaKnown RBP15.16■□□□□ 0.02
CLK3-204ENST00000483723 MRFAP1Q9Y605 127 aa15.16■□□□□ 0.02
CLK3-204ENST00000483723 DYNC1I1O14576 645 aa15.15■□□□□ 0.02
CLK3-204ENST00000483723 B4GALT4O60513 344 aa15.15■□□□□ 0.02
CLK3-204ENST00000483723 GPR32O75388 356 aa15.15■□□□□ 0.02
CLK3-204ENST00000483723 MYL3P08590 195 aa15.15■□□□□ 0.02
CLK3-204ENST00000483723 PURAQ00577 322 aaKnown RBP15.15■□□□□ 0.02
CLK3-204ENST00000483723 BEX3Q00994 111 aa15.15■□□□□ 0.02
CLK3-204ENST00000483723 SP3Q02447 781 aa15.15■□□□□ 0.02
CLK3-204ENST00000483723 ZNF568Q3ZCX4 644 aa15.15■□□□□ 0.02
CLK3-204ENST00000483723 LMBRD2Q68DH5 695 aaPredicted RBP15.15■□□□□ 0.02
CLK3-204ENST00000483723 SMYD5Q6GMV2 418 aa15.15■□□□□ 0.02
CLK3-204ENST00000483723 PPM1KQ8N3J5 372 aa15.15■□□□□ 0.02
CLK3-204ENST00000483723 OR5B17Q8NGF7 314 aa15.15■□□□□ 0.02
CLK3-204ENST00000483723 SECISBP2LQ93073 1101 aaKnown RBP15.15■□□□□ 0.02
CLK3-204ENST00000483723 NAPGQ99747 312 aaPredicted RBP15.15■□□□□ 0.02
CLK3-204ENST00000483723 SALL4Q9UJQ4 1053 aa15.15■□□□□ 0.02
CLK3-204ENST00000483723 TBC1D8O95759 1140 aa15.14■□□□□ 0.01
CLK3-204ENST00000483723 HARSP12081 509 aaKnown RBP15.14■□□□□ 0.01
CLK3-204ENST00000483723 ARF4P18085 180 aaPredicted RBP15.14■□□□□ 0.01
CLK3-204ENST00000483723 AMPD2Q01433 879 aa15.14■□□□□ 0.01
CLK3-204ENST00000483723 AGPAT1Q99943 283 aa15.14■□□□□ 0.01
CLK3-204ENST00000483723 PDZD7Q9H5P4 517 aa15.14■□□□□ 0.01
CLK3-204ENST00000483723 A0A1B0GUA9 196 aa15.14■□□□□ 0.01
CLK3-204ENST00000483723 TSPAN1O60635 241 aa15.14■□□□□ 0.01
CLK3-204ENST00000483723 CYP2C9P11712 490 aa15.14■□□□□ 0.01
CLK3-204ENST00000483723 TNFAIP3P21580 790 aa15.14■□□□□ 0.01
CLK3-204ENST00000483723 PRKCZQ05513 592 aa15.14■□□□□ 0.01
CLK3-204ENST00000483723 PCBP1Q15365 356 aaKnown RBP eCLIP15.14■□□□□ 0.01
CLK3-204ENST00000483723 KYAT1Q16773 422 aa15.14■□□□□ 0.01
CLK3-204ENST00000483723 PAPD7Q5XG87 772 aaKnown RBP15.14■□□□□ 0.01
CLK3-204ENST00000483723 TRIM58Q8NG06 486 aa15.14■□□□□ 0.01
CLK3-204ENST00000483723 NLRP7Q8WX94 980 aa15.14■□□□□ 0.01
CLK3-204ENST00000483723 ERO1AQ96HE7 468 aa15.14■□□□□ 0.01
CLK3-204ENST00000483723 FAM84AQ96KN4 292 aa15.14■□□□□ 0.01
CLK3-204ENST00000483723 PI4K2AQ9BTU6 479 aa15.14■□□□□ 0.01
CLK3-204ENST00000483723 CDC23Q9UJX2 597 aa15.14■□□□□ 0.01
CLK3-204ENST00000483723 MYH10P35580 1976 aa15.14■□□□□ 0.01
CLK3-204ENST00000483723 TRIP12Q14669 1992 aaPredicted RBP15.13■□□□□ 0.01
CLK3-204ENST00000483723 ANO9A1A5B4 782 aa15.13■□□□□ 0.01
CLK3-204ENST00000483723 MACROD2A1Z1Q3 448 aa15.13■□□□□ 0.01
CLK3-204ENST00000483723 SEPT4O43236 478 aa15.13■□□□□ 0.01
CLK3-204ENST00000483723 TACC1O75410 805 aa15.13■□□□□ 0.01
CLK3-204ENST00000483723 CSDE1O75534 798 aaKnown RBP15.13■□□□□ 0.01
CLK3-204ENST00000483723 IL18RAPO95256 599 aa15.13■□□□□ 0.01
CLK3-204ENST00000483723 CLTAP09496 248 aa15.13■□□□□ 0.01
CLK3-204ENST00000483723 DUOXA2Q1HG44 320 aa15.13■□□□□ 0.01
CLK3-204ENST00000483723 WDR44Q5JSH3 913 aa15.13■□□□□ 0.01
CLK3-204ENST00000483723 RUFY4Q6ZNE9 571 aa15.13■□□□□ 0.01
CLK3-204ENST00000483723 THNSL1Q8IYQ7 743 aa15.13■□□□□ 0.01
CLK3-204ENST00000483723 ZNF710Q8N1W2 664 aa15.13■□□□□ 0.01
CLK3-204ENST00000483723 CEP120Q8N960 986 aa15.13■□□□□ 0.01
CLK3-204ENST00000483723 PACSIN1Q9BY11 444 aa15.13■□□□□ 0.01
CLK3-204ENST00000483723 GCOM2Q9BZD3 368 aaPredicted RBP15.13■□□□□ 0.01
CLK3-204ENST00000483723 RNF186Q9NXI6 227 aa15.13■□□□□ 0.01
CLK3-204ENST00000483723 NOCTQ9UK39 431 aaKnown RBP15.13■□□□□ 0.01
CLK3-204ENST00000483723 MYADML2A6NDP7 307 aa15.12■□□□□ 0.01
CLK3-204ENST00000483723 MOCS3O95396 460 aa15.12■□□□□ 0.01
CLK3-204ENST00000483723 CST3P01034 146 aaPredicted RBP15.12■□□□□ 0.01
CLK3-204ENST00000483723 H2AFZP0C0S5 128 aa15.12■□□□□ 0.01
CLK3-204ENST00000483723 CHRNB2P17787 502 aa15.12■□□□□ 0.01
CLK3-204ENST00000483723 PIK3CAP42336 1068 aa15.12■□□□□ 0.01
CLK3-204ENST00000483723 CACNB2Q08289 660 aaPredicted RBP15.12■□□□□ 0.01
CLK3-204ENST00000483723 BIRC3Q13489 604 aa15.12■□□□□ 0.01
CLK3-204ENST00000483723 H2AFVQ71UI9 128 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms