RNA–Protein interactions for RNA: ENST00000483448.1

SYPL1-206, Transcript of synaptophysin like 1, humanhuman

TSL 4

Gene SYPL1, Length 478 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYPL1-206ENST00000483448 CEP120Q8N960 986 aa23.61■■□□□ 1.37
SYPL1-206ENST00000483448 FEZF2Q8TBJ5 459 aa23.61■■□□□ 1.37
SYPL1-206ENST00000483448 SPIRE2Q8WWL2 714 aa23.61■■□□□ 1.37
SYPL1-206ENST00000483448 PBXIP1Q96AQ6 731 aa23.61■■□□□ 1.37
SYPL1-206ENST00000483448 NTPCRQ9BSD7 190 aaKnown RBP23.61■■□□□ 1.37
SYPL1-206ENST00000483448 TTPALQ9BTX7 342 aa23.61■■□□□ 1.37
SYPL1-206ENST00000483448 FNIP2Q9P278 1114 aa23.61■■□□□ 1.37
SYPL1-206ENST00000483448 SLC26A4O43511 780 aa23.6■■□□□ 1.37
SYPL1-206ENST00000483448 MCF2P10911 925 aa23.6■■□□□ 1.37
SYPL1-206ENST00000483448 LONP1P36776 959 aaKnown RBP23.6■■□□□ 1.37
SYPL1-206ENST00000483448 MATR3P43243 847 aaKnown RBP eCLIP23.6■■□□□ 1.37
SYPL1-206ENST00000483448 ELAVL2Q12926 359 aaKnown RBP23.6■■□□□ 1.37
SYPL1-206ENST00000483448 NAB2Q15742 525 aa23.6■■□□□ 1.37
SYPL1-206ENST00000483448 MPZL3Q6UWV2 235 aa23.6■■□□□ 1.37
SYPL1-206ENST00000483448 CCDC149Q6ZUS6 474 aa23.6■■□□□ 1.37
SYPL1-206ENST00000483448 GPR65Q8IYL9 337 aa23.6■■□□□ 1.37
SYPL1-206ENST00000483448 PLCD3Q8N3E9 789 aa23.6■■□□□ 1.37
SYPL1-206ENST00000483448 KREMEN2Q8NCW0 462 aa23.6■■□□□ 1.37
SYPL1-206ENST00000483448 ACSF2Q96CM8 615 aaPredicted RBP23.6■■□□□ 1.37
SYPL1-206ENST00000483448 ACAP3Q96P50 834 aa23.6■■□□□ 1.37
SYPL1-206ENST00000483448 PTPRHQ9HD43 1115 aa23.6■■□□□ 1.37
SYPL1-206ENST00000483448 FOXD4L1Q9NU39 408 aa23.6■■□□□ 1.37
SYPL1-206ENST00000483448 LARSQ9P2J5 1176 aaKnown RBP23.6■■□□□ 1.37
SYPL1-206ENST00000483448 LIMD1Q9UGP4 676 aa23.6■■□□□ 1.37
SYPL1-206ENST00000483448 SMIM28A0A1B0GU29 152 aa23.59■■□□□ 1.37
SYPL1-206ENST00000483448 TGM5O43548 720 aa23.59■■□□□ 1.37
SYPL1-206ENST00000483448 B3GAT3O94766 335 aa23.59■■□□□ 1.37
SYPL1-206ENST00000483448 KRT18P05783 430 aaKnown RBP23.59■■□□□ 1.37
SYPL1-206ENST00000483448 PLA2G5P39877 138 aa23.59■■□□□ 1.37
SYPL1-206ENST00000483448 SIGLEC14Q08ET2 396 aa23.59■■□□□ 1.37
SYPL1-206ENST00000483448 ARSHQ5FYA8 562 aa23.59■■□□□ 1.37
SYPL1-206ENST00000483448 RTP2Q5QGT7 225 aa23.59■■□□□ 1.37
SYPL1-206ENST00000483448 DCLRE1AQ6PJP8 1040 aa23.59■■□□□ 1.37
SYPL1-206ENST00000483448 C15orf39Q6ZRI6 1047 aa23.59■■□□□ 1.37
SYPL1-206ENST00000483448 GPBP1Q86WP2 473 aa23.59■■□□□ 1.37
SYPL1-206ENST00000483448 ZBTB45Q96K62 511 aaPredicted RBP23.59■■□□□ 1.37
SYPL1-206ENST00000483448 PPP1R10Q96QC0 940 aaKnown RBP23.59■■□□□ 1.37
SYPL1-206ENST00000483448 PLEKHA4Q9H4M7 779 aa23.59■■□□□ 1.37
SYPL1-206ENST00000483448 PIDD1Q9HB75 910 aa23.59■■□□□ 1.37
SYPL1-206ENST00000483448 ANKFY1Q9P2R3 1169 aa23.59■■□□□ 1.37
SYPL1-206ENST00000483448 USTQ9Y2C2 406 aa23.59■■□□□ 1.37
SYPL1-206ENST00000483448 ARIH1Q9Y4X5 557 aaPredicted RBP23.59■■□□□ 1.37
SYPL1-206ENST00000483448 GRIN1Q05586 938 aa23.58■■□□□ 1.37
SYPL1-206ENST00000483448 OTOP3Q7RTS5 596 aa23.58■■□□□ 1.37
SYPL1-206ENST00000483448 ZDHHC14Q8IZN3 488 aa23.58■■□□□ 1.37
SYPL1-206ENST00000483448 TMEM161BQ8NDZ6 487 aa23.58■■□□□ 1.37
SYPL1-206ENST00000483448 CMASQ8NFW8 434 aaPredicted RBP23.58■■□□□ 1.37
SYPL1-206ENST00000483448 HDAC7Q8WUI4 952 aa23.58■■□□□ 1.37
SYPL1-206ENST00000483448 BICD1Q96G01 975 aa23.58■■□□□ 1.37
SYPL1-206ENST00000483448 UROC1Q96N76 676 aa23.58■■□□□ 1.37
SYPL1-206ENST00000483448 ZHX3Q9H4I2 956 aa23.58■■□□□ 1.37
SYPL1-206ENST00000483448 H0YCG3 227 aa23.57■■□□□ 1.36
SYPL1-206ENST00000483448 RFPL2O75678 378 aa23.57■■□□□ 1.36
SYPL1-206ENST00000483448 FAM13AO94988 1023 aa23.57■■□□□ 1.36
SYPL1-206ENST00000483448 MAPTP10636 758 aaKnown RBP23.57■■□□□ 1.36
SYPL1-206ENST00000483448 PLCG1P19174 1290 aa23.57■■□□□ 1.36
SYPL1-206ENST00000483448 CLCNKBP51801 687 aa23.57■■□□□ 1.36
SYPL1-206ENST00000483448 MCM6Q14566 821 aa23.57■■□□□ 1.36
SYPL1-206ENST00000483448 KARSQ15046 597 aaKnown RBP23.57■■□□□ 1.36
SYPL1-206ENST00000483448 PSMD5Q16401 504 aa23.57■■□□□ 1.36
SYPL1-206ENST00000483448 MYCT1Q8N699 235 aa23.57■■□□□ 1.36
SYPL1-206ENST00000483448 SMG7Q92540 1137 aaKnown RBP23.57■■□□□ 1.36
SYPL1-206ENST00000483448 GOLGA2P5Q9HBQ8 144 aa23.57■■□□□ 1.36
SYPL1-206ENST00000483448 SORCS3Q9UPU3 1222 aa23.57■■□□□ 1.36
SYPL1-206ENST00000483448 CLIC4Q9Y696 253 aa23.57■■□□□ 1.36
SYPL1-206ENST00000483448 TRAPPC3O43617 180 aa23.56■■□□□ 1.36
SYPL1-206ENST00000483448 TOM1L1O75674 476 aa23.56■■□□□ 1.36
SYPL1-206ENST00000483448 C1RP00736 705 aa23.56■■□□□ 1.36
SYPL1-206ENST00000483448 ASGR2P07307 311 aa23.56■■□□□ 1.36
SYPL1-206ENST00000483448 SYT1P21579 422 aa23.56■■□□□ 1.36
SYPL1-206ENST00000483448 PROZP22891 400 aa23.56■■□□□ 1.36
SYPL1-206ENST00000483448 MTMR3Q13615 1198 aa23.56■■□□□ 1.36
SYPL1-206ENST00000483448 PDXDC1Q6P996 788 aa23.56■■□□□ 1.36
SYPL1-206ENST00000483448 LILRA6Q6PI73 481 aa23.56■■□□□ 1.36
SYPL1-206ENST00000483448 ALKAL1Q6UXT8 129 aa23.56■■□□□ 1.36
SYPL1-206ENST00000483448 CYP26C1Q6V0L0 522 aa23.56■■□□□ 1.36
SYPL1-206ENST00000483448 BMP8AQ7Z5Y6 402 aa23.56■■□□□ 1.36
SYPL1-206ENST00000483448 SUGP1Q8IWZ8 645 aaKnown RBP23.56■■□□□ 1.36
SYPL1-206ENST00000483448 LNX1Q8TBB1 728 aaPredicted RBP23.56■■□□□ 1.36
SYPL1-206ENST00000483448 PIK3R5Q8WYR1 880 aa23.56■■□□□ 1.36
SYPL1-206ENST00000483448 SLC38A7Q9NVC3 462 aa23.56■■□□□ 1.36
SYPL1-206ENST00000483448 ODF2LQ9ULJ1 636 aa23.56■■□□□ 1.36
SYPL1-206ENST00000483448 CLDN3O15551 220 aa23.55■■□□□ 1.36
SYPL1-206ENST00000483448 MARCKSP29966 332 aaPredicted RBP23.55■■□□□ 1.36
SYPL1-206ENST00000483448 CEBPZQ03701 1054 aaKnown RBP23.55■■□□□ 1.36
SYPL1-206ENST00000483448 NOLC1Q14978 699 aaKnown RBP eCLIP23.55■■□□□ 1.36
SYPL1-206ENST00000483448 UPP1Q16831 310 aa23.55■■□□□ 1.36
SYPL1-206ENST00000483448 SEZ6Q53EL9 994 aa23.55■■□□□ 1.36
SYPL1-206ENST00000483448 SPECC1Q5M775 1068 aa23.55■■□□□ 1.36
SYPL1-206ENST00000483448 PDZRN4Q6ZMN7 1036 aaPredicted RBP23.55■■□□□ 1.36
SYPL1-206ENST00000483448 HAUS6Q7Z4H7 955 aa23.55■■□□□ 1.36
SYPL1-206ENST00000483448 RAD54LQ92698 747 aa23.55■■□□□ 1.36
SYPL1-206ENST00000483448 DDX27Q96GQ7 796 aaKnown RBP23.55■■□□□ 1.36
SYPL1-206ENST00000483448 SNX27Q96L92 541 aa23.55■■□□□ 1.36
SYPL1-206ENST00000483448 CLSTN3Q9BQT9 956 aa23.55■■□□□ 1.36
SYPL1-206ENST00000483448 REEP2Q9BRK0 252 aa23.55■■□□□ 1.36
SYPL1-206ENST00000483448 BLOC1S4Q9NUP1 217 aa23.55■■□□□ 1.36
SYPL1-206ENST00000483448 TMEM189-UBE2V1I3L0A0 370 aa23.54■■□□□ 1.36
SYPL1-206ENST00000483448 BRD1O95696 1058 aa23.54■■□□□ 1.36
SYPL1-206ENST00000483448 IGFBP6P24592 240 aaPredicted RBP23.54■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms