RNA–Protein interactions for RNA: ENST00000483359.5

CPNE1-224, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,975 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-224ENST00000483359 LRRC55Q6ZSA7 311 aa19.4■□□□□ 0.7
CPNE1-224ENST00000483359 SPRED2Q7Z698 418 aa19.4■□□□□ 0.7
CPNE1-224ENST00000483359 C12orf56Q8IXR9 622 aa19.4■□□□□ 0.7
CPNE1-224ENST00000483359 LRRC43Q8N309 656 aa19.4■□□□□ 0.7
CPNE1-224ENST00000483359 NKX2-4Q9H2Z4 354 aa19.4■□□□□ 0.7
CPNE1-224ENST00000483359 PCDHA11Q9Y5I1 949 aa19.4■□□□□ 0.7
CPNE1-224ENST00000483359 MRPL42Q9Y6G3 142 aaKnown RBP19.4■□□□□ 0.7
CPNE1-224ENST00000483359 TDRD15B5MCY1 1934 aaKnown RBP19.4■□□□□ 0.7
CPNE1-224ENST00000483359 RALGAPA2Q2PPJ7 1873 aa19.39■□□□□ 0.7
CPNE1-224ENST00000483359 ADRB2P07550 413 aa19.39■□□□□ 0.7
CPNE1-224ENST00000483359 DNAJB2P25686 324 aa19.39■□□□□ 0.7
CPNE1-224ENST00000483359 WNT7BP56706 349 aa19.39■□□□□ 0.7
CPNE1-224ENST00000483359 TYRO3Q06418 890 aa19.39■□□□□ 0.7
CPNE1-224ENST00000483359 STX1AQ16623 288 aa19.39■□□□□ 0.7
CPNE1-224ENST00000483359 KYAT1Q16773 422 aa19.39■□□□□ 0.7
CPNE1-224ENST00000483359 ZSCAN23Q3MJ62 389 aa19.39■□□□□ 0.7
CPNE1-224ENST00000483359 SPOUT1Q5T280 376 aaKnown RBP19.39■□□□□ 0.7
CPNE1-224ENST00000483359 CMTR2Q8IYT2 770 aaKnown RBP19.39■□□□□ 0.7
CPNE1-224ENST00000483359 FIBCD1Q8N539 461 aa19.39■□□□□ 0.7
CPNE1-224ENST00000483359 ZMAT2Q96NC0 199 aaKnown RBP19.39■□□□□ 0.7
CPNE1-224ENST00000483359 MRPL9Q9BYD2 267 aaKnown RBP19.39■□□□□ 0.7
CPNE1-224ENST00000483359 GZF1Q9H116 711 aaPredicted RBP19.39■□□□□ 0.7
CPNE1-224ENST00000483359 MSRAQ9UJ68 235 aa19.39■□□□□ 0.7
CPNE1-224ENST00000483359 MTUS1Q9ULD2 1270 aa19.39■□□□□ 0.7
CPNE1-224ENST00000483359 LACTBL1A8MY62 500 aa19.39■□□□□ 0.69
CPNE1-224ENST00000483359 KIAA0391O15091 583 aaKnown RBP19.39■□□□□ 0.69
CPNE1-224ENST00000483359 PBX3P40426 434 aa19.39■□□□□ 0.69
CPNE1-224ENST00000483359 LRRC63Q05C16 580 aa19.39■□□□□ 0.69
CPNE1-224ENST00000483359 ADAM9Q13443 819 aa19.39■□□□□ 0.69
CPNE1-224ENST00000483359 EDRF1Q3B7T1 1238 aa19.39■□□□□ 0.69
CPNE1-224ENST00000483359 LRIT3Q3SXY7 679 aa19.39■□□□□ 0.69
CPNE1-224ENST00000483359 C11orf57Q6ZUT1 292 aaPredicted RBP19.39■□□□□ 0.69
CPNE1-224ENST00000483359 ZNF280BQ86YH2 543 aa19.39■□□□□ 0.69
CPNE1-224ENST00000483359 CACNG4Q9UBN1 327 aa19.39■□□□□ 0.69
CPNE1-224ENST00000483359 CHD9Q3L8U1 2897 aa19.38■□□□□ 0.69
CPNE1-224ENST00000483359 ANK1P16157 1881 aa19.38■□□□□ 0.69
CPNE1-224ENST00000483359 KIAA1671Q9BY89 1806 aa19.38■□□□□ 0.69
CPNE1-224ENST00000483359 LINC01553A4QN01 128 aa19.38■□□□□ 0.69
CPNE1-224ENST00000483359 ZNF233A6NK53 670 aa19.38■□□□□ 0.69
CPNE1-224ENST00000483359 B4GALT3O60512 393 aa19.38■□□□□ 0.69
CPNE1-224ENST00000483359 ZC3H11AO75152 810 aaKnown RBP eCLIP19.38■□□□□ 0.69
CPNE1-224ENST00000483359 RAB30Q15771 203 aa19.38■□□□□ 0.69
CPNE1-224ENST00000483359 TTI2Q6NXR4 508 aa19.38■□□□□ 0.69
CPNE1-224ENST00000483359 BRSK2Q8IWQ3 736 aa19.38■□□□□ 0.69
CPNE1-224ENST00000483359 TMEM130Q8N3G9 435 aa19.38■□□□□ 0.69
CPNE1-224ENST00000483359 SP7Q8TDD2 431 aaPredicted RBP19.38■□□□□ 0.69
CPNE1-224ENST00000483359 FAM84AQ96KN4 292 aa19.38■□□□□ 0.69
CPNE1-224ENST00000483359 DMAC2Q9NW81 257 aa19.38■□□□□ 0.69
CPNE1-224ENST00000483359 CNTN3Q9P232 1028 aa19.38■□□□□ 0.69
CPNE1-224ENST00000483359 DACH1Q9UI36 760 aa19.38■□□□□ 0.69
CPNE1-224ENST00000483359 SZT2Q5T011 3432 aa19.37■□□□□ 0.69
CPNE1-224ENST00000483359 SMIM28A0A1B0GU29 152 aa19.37■□□□□ 0.69
CPNE1-224ENST00000483359 TTC26A0AVF1 554 aa19.37■□□□□ 0.69
CPNE1-224ENST00000483359 BICDL2A1A5D9 508 aa19.37■□□□□ 0.69
CPNE1-224ENST00000483359 SOX1O00570 391 aaPredicted RBP19.37■□□□□ 0.69
CPNE1-224ENST00000483359 AKAP3O75969 853 aa19.37■□□□□ 0.69
CPNE1-224ENST00000483359 DDHD2O94830 711 aa19.37■□□□□ 0.69
CPNE1-224ENST00000483359 RPL13P26373 211 aaKnown RBP19.37■□□□□ 0.69
CPNE1-224ENST00000483359 SMAD3P84022 425 aaKnown RBP19.37■□□□□ 0.69
CPNE1-224ENST00000483359 PPP2R2DQ66LE6 453 aa19.37■□□□□ 0.69
CPNE1-224ENST00000483359 ALKAL1Q6UXT8 129 aa19.37■□□□□ 0.69
CPNE1-224ENST00000483359 SLC9A9Q8IVB4 645 aa19.37■□□□□ 0.69
CPNE1-224ENST00000483359 KIF12Q96FN5 646 aa19.37■□□□□ 0.69
CPNE1-224ENST00000483359 FBXL18Q96ME1 805 aa19.37■□□□□ 0.69
CPNE1-224ENST00000483359 DNAJC25Q9H1X3 360 aa19.37■□□□□ 0.69
CPNE1-224ENST00000483359 CERS4Q9HA82 394 aa19.37■□□□□ 0.69
CPNE1-224ENST00000483359 GOLGA2P5Q9HBQ8 144 aa19.37■□□□□ 0.69
CPNE1-224ENST00000483359 PDE11AQ9HCR9 933 aa19.37■□□□□ 0.69
CPNE1-224ENST00000483359 ANO10Q9NW15 660 aa19.37■□□□□ 0.69
CPNE1-224ENST00000483359 DNAJB4Q9UDY4 337 aa19.37■□□□□ 0.69
CPNE1-224ENST00000483359 FRMD4BQ9Y2L6 1034 aa19.37■□□□□ 0.69
CPNE1-224ENST00000483359 CHD7Q9P2D1 2997 aa19.37■□□□□ 0.69
CPNE1-224ENST00000483359 THP07101 528 aa19.37■□□□□ 0.69
CPNE1-224ENST00000483359 NFICP08651 508 aa19.37■□□□□ 0.69
CPNE1-224ENST00000483359 GRIK3Q13003 919 aa19.37■□□□□ 0.69
CPNE1-224ENST00000483359 LMBRD2Q68DH5 695 aaPredicted RBP19.37■□□□□ 0.69
CPNE1-224ENST00000483359 JADE1Q6IE81 842 aa19.37■□□□□ 0.69
CPNE1-224ENST00000483359 RABGGTAQ92696 567 aa19.37■□□□□ 0.69
CPNE1-224ENST00000483359 C18orf25Q96B23 403 aaPredicted RBP19.37■□□□□ 0.69
CPNE1-224ENST00000483359 CCDC127Q96BQ5 260 aa19.37■□□□□ 0.69
CPNE1-224ENST00000483359 TIFAQ96CG3 184 aa19.37■□□□□ 0.69
CPNE1-224ENST00000483359 FAM193BQ96PV7 902 aaPredicted RBP19.37■□□□□ 0.69
CPNE1-224ENST00000483359 MED15Q96RN5 788 aa19.37■□□□□ 0.69
CPNE1-224ENST00000483359 DUSP9Q99956 384 aaKnown RBP19.37■□□□□ 0.69
CPNE1-224ENST00000483359 KIAA1586Q9HCI6 787 aa19.37■□□□□ 0.69
CPNE1-224ENST00000483359 KANSL3Q9P2N6 904 aa19.37■□□□□ 0.69
CPNE1-224ENST00000483359 RWDD2AQ9UIY3 292 aa19.37■□□□□ 0.69
CPNE1-224ENST00000483359 CASTOR2A6NHX0 329 aa19.36■□□□□ 0.69
CPNE1-224ENST00000483359 INPPL1O15357 1258 aa19.36■□□□□ 0.69
CPNE1-224ENST00000483359 LETM1O95202 739 aaPredicted RBP19.36■□□□□ 0.69
CPNE1-224ENST00000483359 FKBP3Q00688 224 aaKnown RBP19.36■□□□□ 0.69
CPNE1-224ENST00000483359 NFIL3Q16649 462 aa19.36■□□□□ 0.69
CPNE1-224ENST00000483359 CSGALNACT2Q8N6G5 542 aa19.36■□□□□ 0.69
CPNE1-224ENST00000483359 LRCH3Q96II8 777 aa19.36■□□□□ 0.69
CPNE1-224ENST00000483359 C17orf80Q9BSJ5 609 aa19.36■□□□□ 0.69
CPNE1-224ENST00000483359 CWH43Q9H720 699 aa19.36■□□□□ 0.69
CPNE1-224ENST00000483359 NRDE2Q9H7Z3 1164 aa19.36■□□□□ 0.69
CPNE1-224ENST00000483359 SLC28A3Q9HAS3 691 aa19.36■□□□□ 0.69
CPNE1-224ENST00000483359 TUBGCP4Q9UGJ1 667 aa19.36■□□□□ 0.69
CPNE1-224ENST00000483359 PDCD11Q14690 1871 aaKnown RBP19.36■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms