RNA–Protein interactions for RNA: ENST00000483275.1

VARS-226, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 450 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-226ENST00000483275 PPP4R3CPQ6ZMV5 832 aa15.37■□□□□ 0.05
VARS-226ENST00000483275 ZBTB8OSQ8IWT0 167 aa15.37■□□□□ 0.05
VARS-226ENST00000483275 ITFG1Q8TB96 612 aa15.37■□□□□ 0.05
VARS-226ENST00000483275 KCNG4Q8TDN1 519 aa15.37■□□□□ 0.05
VARS-226ENST00000483275 ING5Q8WYH8 240 aa15.37■□□□□ 0.05
VARS-226ENST00000483275 RHOBTB2Q9BYZ6 727 aa15.37■□□□□ 0.05
VARS-226ENST00000483275 CCDC113Q9H0I3 377 aa15.37■□□□□ 0.05
VARS-226ENST00000483275 DPP7Q9UHL4 492 aa15.37■□□□□ 0.05
VARS-226ENST00000483275 N4BP3O15049 544 aa15.36■□□□□ 0.05
VARS-226ENST00000483275 C8AP07357 584 aa15.36■□□□□ 0.05
VARS-226ENST00000483275 GLULP15104 373 aa15.36■□□□□ 0.05
VARS-226ENST00000483275 NBR1Q14596 966 aa15.36■□□□□ 0.05
VARS-226ENST00000483275 ZNF174Q15697 407 aa15.36■□□□□ 0.05
VARS-226ENST00000483275 NAB2Q15742 525 aa15.36■□□□□ 0.05
VARS-226ENST00000483275 PPM1LQ5SGD2 360 aa15.36■□□□□ 0.05
VARS-226ENST00000483275 LIN9Q5TKA1 542 aa15.36■□□□□ 0.05
VARS-226ENST00000483275 PADI6Q6TGC4 694 aa15.36■□□□□ 0.05
VARS-226ENST00000483275 CYP26C1Q6V0L0 522 aa15.36■□□□□ 0.05
VARS-226ENST00000483275 MCPH1Q8NEM0 835 aa15.36■□□□□ 0.05
VARS-226ENST00000483275 LNX1Q8TBB1 728 aaPredicted RBP15.36■□□□□ 0.05
VARS-226ENST00000483275 SLC7A14Q8TBB6 771 aa15.36■□□□□ 0.05
VARS-226ENST00000483275 HDAC7Q8WUI4 952 aa15.36■□□□□ 0.05
VARS-226ENST00000483275 KXD1Q9BQD3 176 aa15.36■□□□□ 0.05
VARS-226ENST00000483275 FZD8Q9H461 694 aa15.36■□□□□ 0.05
VARS-226ENST00000483275 GOLGA2P5Q9HBQ8 144 aa15.36■□□□□ 0.05
VARS-226ENST00000483275 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.36■□□□□ 0.05
VARS-226ENST00000483275 ZMYM2Q9UBW7 1377 aa15.36■□□□□ 0.05
VARS-226ENST00000483275 DNAH14Q0VDD8 3507 aa15.35■□□□□ 0.05
VARS-226ENST00000483275 CITO14578 2027 aa15.35■□□□□ 0.05
VARS-226ENST00000483275 ARHGEF35A5YM69 484 aa15.35■□□□□ 0.05
VARS-226ENST00000483275 PAPLNO95428 1278 aa15.35■□□□□ 0.05
VARS-226ENST00000483275 THP07101 528 aa15.35■□□□□ 0.05
VARS-226ENST00000483275 NEK4P51957 841 aa15.35■□□□□ 0.05
VARS-226ENST00000483275 ANAPC15P60006 121 aa15.35■□□□□ 0.05
VARS-226ENST00000483275 GPC5P78333 572 aa15.35■□□□□ 0.05
VARS-226ENST00000483275 CREMQ03060 361 aa15.35■□□□□ 0.05
VARS-226ENST00000483275 ECM1Q16610 540 aa15.35■□□□□ 0.05
VARS-226ENST00000483275 DCLRE1AQ6PJP8 1040 aa15.35■□□□□ 0.05
VARS-226ENST00000483275 RSPO2Q6UXX9 243 aaPredicted RBP15.35■□□□□ 0.05
VARS-226ENST00000483275 DEPTORQ8TB45 409 aa15.35■□□□□ 0.05
VARS-226ENST00000483275 PIK3R5Q8WYR1 880 aa15.35■□□□□ 0.05
VARS-226ENST00000483275 PRIMPOLQ96LW4 560 aa15.35■□□□□ 0.05
VARS-226ENST00000483275 TUFT1Q9NNX1 390 aa15.35■□□□□ 0.05
VARS-226ENST00000483275 PDCD11Q14690 1871 aaKnown RBP15.35■□□□□ 0.05
VARS-226ENST00000483275 OR1D2P34982 312 aa15.34■□□□□ 0.05
VARS-226ENST00000483275 SNW1Q13573 536 aaKnown RBP15.34■□□□□ 0.05
VARS-226ENST00000483275 MAPK6Q16659 721 aa15.34■□□□□ 0.05
VARS-226ENST00000483275 FAM187BQ17R55 369 aa15.34■□□□□ 0.05
VARS-226ENST00000483275 ERICH6BQ5W0A0 696 aa15.34■□□□□ 0.05
VARS-226ENST00000483275 CEP120Q8N960 986 aa15.34■□□□□ 0.05
VARS-226ENST00000483275 C3orf58Q8NDZ4 430 aa15.34■□□□□ 0.05
VARS-226ENST00000483275 FGF13Q92913 245 aa15.34■□□□□ 0.05
VARS-226ENST00000483275 DLGAP2Q9P1A6 1054 aa15.34■□□□□ 0.05
VARS-226ENST00000483275 CDH7Q9ULB5 785 aa15.34■□□□□ 0.05
VARS-226ENST00000483275 SIT1Q9Y3P8 196 aa15.34■□□□□ 0.05
VARS-226ENST00000483275 NCOR2Q9Y618 2525 aa15.34■□□□□ 0.05
VARS-226ENST00000483275 MYH11P35749 1972 aa15.33■□□□□ 0.05
VARS-226ENST00000483275 OR52Z1P0C646 297 aa15.33■□□□□ 0.04
VARS-226ENST00000483275 CYP11B2P19099 503 aa15.33■□□□□ 0.04
VARS-226ENST00000483275 CD72P21854 359 aa15.33■□□□□ 0.04
VARS-226ENST00000483275 TKTP29401 623 aaKnown RBP15.33■□□□□ 0.04
VARS-226ENST00000483275 CLCNKBP51801 687 aa15.33■□□□□ 0.04
VARS-226ENST00000483275 AXDND1Q5T1B0 1012 aaPredicted RBP15.33■□□□□ 0.04
VARS-226ENST00000483275 NT5DC1Q5TFE4 455 aa15.33■□□□□ 0.04
VARS-226ENST00000483275 CCDC83Q8IWF9 413 aa15.33■□□□□ 0.04
VARS-226ENST00000483275 TMEM130Q8N3G9 435 aa15.33■□□□□ 0.04
VARS-226ENST00000483275 PJA1Q8NG27 643 aa15.33■□□□□ 0.04
VARS-226ENST00000483275 NXPE3Q969Y0 559 aa15.33■□□□□ 0.04
VARS-226ENST00000483275 NACC1Q96RE7 527 aa15.33■□□□□ 0.04
VARS-226ENST00000483275 ADPGKQ9BRR6 497 aa15.33■□□□□ 0.04
VARS-226ENST00000483275 POLR3CQ9BUI4 534 aaPredicted RBP15.33■□□□□ 0.04
VARS-226ENST00000483275 C2orf40Q9H1Z8 148 aa15.33■□□□□ 0.04
VARS-226ENST00000483275 SLC2A4RGQ9NR83 387 aa15.33■□□□□ 0.04
VARS-226ENST00000483275 MTF2Q9Y483 593 aaPredicted RBP15.33■□□□□ 0.04
VARS-226ENST00000483275 ACKR2O00590 384 aa15.32■□□□□ 0.04
VARS-226ENST00000483275 SP9P0CG40 484 aa15.32■□□□□ 0.04
VARS-226ENST00000483275 XRCC6P12956 609 aaKnown RBP eCLIP15.32■□□□□ 0.048e-6■■□□□ 12.6
VARS-226ENST00000483275 NAMPTP43490 491 aa15.32■□□□□ 0.04
VARS-226ENST00000483275 BRCC3P46736 316 aa15.32■□□□□ 0.04
VARS-226ENST00000483275 ID4P47928 161 aa15.32■□□□□ 0.04
VARS-226ENST00000483275 OSTNP61366 133 aa15.32■□□□□ 0.04
VARS-226ENST00000483275 SOX4Q06945 474 aaPredicted RBP15.32■□□□□ 0.04
VARS-226ENST00000483275 SLC5A9Q2M3M2 681 aa15.32■□□□□ 0.04
VARS-226ENST00000483275 CD300LGQ6UXG3 332 aa15.32■□□□□ 0.04
VARS-226ENST00000483275 NPAS3Q8IXF0 933 aa15.32■□□□□ 0.04
VARS-226ENST00000483275 GPR65Q8IYL9 337 aa15.32■□□□□ 0.04
VARS-226ENST00000483275 KIAA2013Q8IYS2 634 aa15.32■□□□□ 0.04
VARS-226ENST00000483275 PPP1R10Q96QC0 940 aaKnown RBP15.32■□□□□ 0.04
VARS-226ENST00000483275 HINFPQ9BQA5 517 aa15.32■□□□□ 0.04
VARS-226ENST00000483275 BHMT2Q9H2M3 363 aa15.32■□□□□ 0.04
VARS-226ENST00000483275 MTRRQ9UBK8 725 aa15.32■□□□□ 0.04
VARS-226ENST00000483275 CDY1Q9Y6F8 540 aa15.32■□□□□ 0.04
VARS-226ENST00000483275 TICRRQ7Z2Z1 1910 aa15.31■□□□□ 0.04
VARS-226ENST00000483275 SPTBN2O15020 2390 aa15.31■□□□□ 0.04
VARS-226ENST00000483275 NRG2O14511 850 aaPredicted RBP15.31■□□□□ 0.04
VARS-226ENST00000483275 XYLBO75191 536 aa15.31■□□□□ 0.04
VARS-226ENST00000483275 B3GAT3O94766 335 aa15.31■□□□□ 0.04
VARS-226ENST00000483275 SEC24BO95487 1268 aa15.31■□□□□ 0.04
VARS-226ENST00000483275 LMNAP02545 664 aaKnown RBP15.31■□□□□ 0.04
VARS-226ENST00000483275 HNRNPA1P09651 372 aaKnown RBP eCLIP15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms